Rhinichthys klamathensis goyatoka (western speckled dace): 130095271
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Entry
130095271 CDS
T09701
Symbol
lrfn4a
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and fibronectin type-III domain-containing protein 4
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130095271 (lrfn4a)
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130095271 (lrfn4a)
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
SALM family
130095271 (lrfn4a)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130095271 (lrfn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_1
ig
fn3
LRR_9
Ig_2
LRRCT
Motif
Other DBs
NCBI-GeneID:
130095271
NCBI-ProteinID:
XP_056117937
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MPHTEPGSPSRGTDLLQEQGNSKWIQSRRYYASSNPFSTINVHPSPMPQSTIFWLGLLGF
VLLRSGQGVLAGETWGMVSICPIHCVCRNLSESLSTLCVNKGLLFVPPNIDRRTVELRLA
DNYILEVGGADFANMTGLVDLTLSRNTIHSLKPLAFADLESLRSLHLDTNRLTVVGPQDL
TGLVNLQHLIINNNQLTDVSVDAFDDFLLTLEDLDLSYNNLRRVPWESIQNMASLHTLNL
DHNLIDQIAEGSFSELFKLSRLDMTSNRLQTLPPDPLFSRSQIGVVSPTPYNSITSLNFG
GNPLHCNCELLWLRRLIREDDMETCATPAHLAGRYFWSIPEEEFTCEPPLITRNTNKLWV
LEGQRATLKCRAIGDPEPVIHWVSPDDRIVANSSRICSYYNGTLDFLVTRARDDGTYTCI
AINAAGESTALVELKIIPLPHRGNGTISLINHRDPGSSDISSGRGGVEGAGTGVVTVRNV
TGGKGDTGERGSGSSNGGKETLVAVLGVTSNSAQIRWKMGRSSMPFLVWMYQIQYNSTAD
DALVYRILPPNSNSFLLKNLVSGADYSLCVLAIFDDGISSLATTKVLGCIQFSTKEDYPE
CRSLHAHFLGGTLTVMVGGVVVVTLLVFTVAMMVRHRVCGECRDDANRPGKFFPAKGVDV
YAQTNGNNSMMMVALPNGVLAQRTKDKHKHSSLSKPKQXPEPHHGTHDRGDEAVREKSFS
PLTPESERLTLFYSPSNTLPIPTQKRAGRLKLRKPLEKDRKHGQRASASLALKQDGDDGR
EGGSDLRQALKTKRSCSFDVGEITTTTTCYGYAKRLSVIWTRRXQSLHGMLVHCASTTST
SSTGSSEQYGNGLTQNYLHAFTSNNSSNSNSNSTSNSNSSMTVNPRDLEESVV
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgccacacacagaaccagggagtccatctagaggaaccgatctgttgcaagaacagggc
aactcaaaatggatccagtcaaggagatattatgcttcatctaaccctttcagcacaata
aatgtccaccccagtcccatgccacaatcaacaattttctggctgggtctcctaggcttc
gtattgctgcggagcggacaaggtgtgttggcaggggagacatggggcatggtgtccatc
tgccccatccactgcgtgtgtcggaacttatctgagtctctaagcacactttgcgtgaat
aaaggtctgcttttcgtgccaccgaacattgatcgccgcactgtggagctccgtcttgct
gacaactacatcttggaagtgggaggtgcagactttgctaatatgacaggactagttgac
ttaacattgtcacgcaacaccatccattctctaaaaccactggcctttgctgatctggag
agtctgcgttcacttcacctggacaccaaccgtctcacagtggtgggacctcaggatctg
acaggtcttgttaaccttcagcatctaatcatcaacaacaaccagctcacagatgtttcg
gtggatgcttttgatgacttcctattgactctggaagatctggacctttcctacaacaac
ctacgcagggttccttgggaatctatacagaatatggctagcctgcacaccttaaatcta
gatcacaatctaatagaccagattgctgagggttctttcagtgagctcttcaaactgtct
cgactggatatgacctcgaacagattgcagactcttccccctgatccactgttttccaga
tcccagattggggttgtcagtccaacaccatacaattccatcaccagccttaactttggg
ggaaatcccctgcactgcaactgtgagctgttgtggctacgacgactaattcgggaagat
gacatggagacgtgtgccacacctgctcatctggcgggtcgctacttctggtccatccct
gaggaagagttcacgtgtgagccaccactgatcacccgcaataccaacaagctgtgggtg
ttggagggtcaaagagccacacttaaatgtagagccattggtgaccctgagccagttatt
cattgggtgtcaccagatgaccgtattgtggccaactccagtcgcatttgttcgtactac
aacggcacactggattttttggtgacccgtgccagagatgatggcacctatacgtgcatt
gccattaatgctgcaggggaatctacagctctggtagaattgaagatcatccctcttccc
catagaggtaatggtacaatatctcttatcaaccacagagaccctggatcatctgatatt
agcagtgggcggggaggggttgaaggggcagggactggtgtggtgactgtacggaatgtc
actggaggcaagggagatactggagaaagaggaagcggaagcagtaatggaggaaaagaa
accctggtagcagttttaggcgtgacatccaattcagctcagattcgctggaaaatgggt
cgatcttcaatgcctttcttggtgtggatgtatcagatccagtacaatagcactgctgac
gacgcacttgtttatagaattctgcctccaaacagtaatagcttcctgctgaaaaacctg
gtgtcaggagcagactacagcctgtgtgtcttggccatattcgatgatggcatctcctcc
ttggctactacaaaggtgctgggctgcatccagttcagcactaaagaggattatccagaa
tgccgttctctgcacgctcacttcctgggcggcacgctgactgtgatggtgggtggtgtg
gtggtagtaacccttctggtcttcaccgtggccatgatggtgcgccatcgcgtatgcgga
gagtgtcgggatgatgccaacaggcccggcaaattctttccagccaaaggggtggatgtt
tacgcccagacaaatggaaacaacagtatgatgatggtggcgttgccaaacggagtcttg
gcccaaagaacaaaagacaaacacaagcacagttctctctcaaaacccaaacagnagcca
gagccacaccatggcacacatgataggggtgacgaggcagtgagggaaaaatcttttagt
cctctcacaccagaaagtgagagattgacactcttctactccccaagtaacacactgccc
attccgacacaaaagcgagcaggtaggctcaagttgcggaagcctctagagaaagacaga
aaacatggacagagagcctcggcctcgcttgcattgaaacaagatggagatgacggaagg
gaaggaggctcagacttgaggcaggcactaaaaaccaagcgtagctgctcttttgatgtg
ggtgaaatcaccaccactaccacgtgttacggctacgccaagcggctgagtgtcatctgg
acccgtcgtnagcagtcgctacatggcatgcttgttcactgtgcctccaccaccagcaca
tccagcacaggtagcagcgagcagtacggcaacggcctaacgcaaaactatctacatgcc
tttacttctaacaactcctccaactctaactctaactcgacttcaaactcaaacagtagc
atgaccgtcaatccaagagacctggaggaaagcgtggtgtag
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