Rhinichthys klamathensis goyatoka (western speckled dace): 130095281
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Entry
130095281 CDS
T09701
Symbol
sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130095281 (sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130095281 (sart1)
04121 Ubiquitin system [BR:
rkg04121
]
130095281 (sart1)
Spliceosome [BR:
rkg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
130095281 (sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
130095281 (sart1)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130095281 (sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SART-1
HIND
HA
Motif
Other DBs
NCBI-GeneID:
130095281
NCBI-ProteinID:
XP_056117949
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MGSSKKHKEKEKDRDPEDRHREHKKHRHKDRDKEKEKDRDREKRKRSRSRERSSRGAERD
RSGRAERSNAEPRVKKERLDPAFEDNSEPGPKSAGGDASLSIEETNKLRAKLGLKPLDLN
ENKKETGTKEEPLVAETINPVHIKQQAEIREKLAALKEKRLLNKKLGKVKALGDDEPWLD
DTAAWVERSRKLAKEKELAEKRAKLLEEMDEEFGVSNLVEQEFAQEKRDSYGSRHLKGLK
VQHKMDSFREGETVVLTLQDKGVLEEKEDVLVNVGLVDKEKAEKNVELKKKKPDYKPYEE
EESVDDMLVLKPKSVLSKYDEEIEGEKKKSFRLSSGGFVGGERERELQAIRENLHNQAQS
LDMPSLSLATEYYTPQEMVGFKKTKRKVKKIRKKERAGDLLIDDTRSTDFGSRSRGRGRR
QDEEEEEGAEPGYVALETSSKPRDVLQQSDDIRMADMDISDEEDFVSPEPTAFEEDEAEQ
ELQKQLEKQRKLRQKQMLKDSGERVAEHLKQMETAEDDENDPDKRNNIVFNATSEFCRTL
GDIPTYGLSGNREDQEDIMDFEKDVEKEGGGQSDSDMDDNVGWSTVNLDEEKVQADFSTA
STTILDEEPIVNSGLSAALLLCKNKGLLDTQMLKVARVKNPKPVLANDNYCIEDKMNIDD
KYSRREEYRGFTQDFKEKDHYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGKMKT
ERRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANTITK
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggttcatcaaagaaacacaaagaaaaggagaaagaccgggatcccgaggatcggcac
cgtgagcacaagaaacaccgtcacaaggatcgagacaaggagaaggagaaggaccgagat
cgagagaagagaaagagatcccgatccagagagaggagcagccggggagcagagagagac
agaagcgggagagcagagaggagcaatgcagagccgcgagtcaagaaagagaggcttgat
cctgctttcgaggacaacagcgagccaggtcccaaatctgctggtggtgatgcttcgctc
agcattgaagagaccaataaactaagggccaaactaggtttaaaaccccttgatctcaat
gaaaacaagaaagagactggaaccaaggaggagcccctcgtggctgagaccattaatcct
gtccacatcaaacagcaggctgagattagagagaaactggctgctctcaaagagaagcgt
ctactcaataagaaactggggaaggtgaaggcgcttggggatgatgaaccatggctggac
gacacagcagcctgggtagagaggagtcgcaaactagccaaggagaaggagttggcagag
aagagggccaaactcctagaggagatggacgaagagttcggtgtgagcaatctggtcgag
caggagtttgcacaggaaaagagggactcgtacggctcacgccatctcaaagggctcaag
gttcaacacaagatggactctttcagagagggagaaacggttgtattaactctacaagac
aaaggtgttctggaggagaaggaggacgtgctggtgaatgtgggtctggtggacaaagag
aaagcagagaaaaatgtggagctgaagaaaaagaagccagattataaaccttatgaagaa
gaggagagtgtggatgacatgctcgttctcaagccaaagtctgtgctgtccaagtacgat
gaggagatcgagggagagaagaagaagagtttcaggctgagttctggaggttttgtcggg
ggtgagagagagcgagagctgcaggccatcagagaaaacctgcacaatcaggcccagtct
ctggacatgccctctctcagcctcgccactgaatactacacgccacaggaaatggttggc
tttaagaagaccaaacgcaaagtcaagaaaatcagaaagaaggagagggctggtgacctc
ttgattgacgacactcgaagcacagattttggctccaggtctcgaggtcgaggtagaagg
caagatgaggaggaggaggagggggcggagcctggatatgttgctttggaaaccagcagc
aagcccagggatgtcctccaacagtcggatgacattagaatggccgacatggacattagt
gatgaagaggactttgtctctccagagcctactgcatttgaagaggatgaagcagagcag
gagctccagaaacaacttgagaaacagaggaaactcaggcaaaaacagatgctcaaagac
tcaggagagagggtggctgagcacctgaagcaaatggagacggcagaagatgacgagaat
gacccagacaaaaggaacaacattgtcttcaatgccacctctgaattttgtcgtactctt
ggagacatcccaacctacgggctgtcaggaaaccgagaggaccaagaggatattatggac
tttgaaaaggatgttgagaaagaaggaggtggacagtcagactctgatatggatgacaac
gtgggctggagcactgtcaacctggacgaggagaaagtccaggcagatttctcaacggca
tccacaactattctggatgaagagcccattgtaaactctggtctctctgctgctctgctt
ctgtgcaaaaacaaagggctgttggacacacagatgctgaaggtggctcgtgtcaaaaac
ccaaaaccagttctggcaaacgataactactgcatcgaagacaagatgaatattgatgac
aagtacagcaggagggaggaatacagaggcttcactcaggattttaaggaaaaggatcac
tacaagcctgatgtcaagattgaatatgttgatgaatctggtcgcaagctgacccctaaa
gaggctttcagacagctgtcccatcgcttccacgggaagggttctggcaagatgaagacg
gaacggagaatgaaaaagcttgaggaagaggcgctgctgaagaagatgagcagcagtgac
actcctctgggaaccgtcgctcttctgcaggaaaagcagaagtcccagaaaactccttac
attgtgctgagtggcagtgggaagagcatgaatgcgaacaccataacaaagtaa
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integrated database retrieval system
