Rhinichthys klamathensis goyatoka (western speckled dace): 130095394
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Entry
130095394 CDS
T09701
Symbol
rbm22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130095394 (rbm22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130095394 (rbm22)
Spliceosome [BR:
rkg03041
]
Complex B
Other components
Prp19-related factors
130095394 (rbm22)
Complex C
130095394 (rbm22)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
RRM_YTH1
zf-CCCH_4
zf-CCCH_10
RRM_PARP14_3
zf-CCCH_12
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
130095394
NCBI-ProteinID:
XP_056118107
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MATSLGSNTYNRQNWEDSDFPILCQTCLGENPYIRMTKEKFGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLSVKDEVPRSDVNKEYYTQN
MEREIANSDGTRPVGLLGKAPSSSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDVPEDKSITTLYIGGLG
ENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKSFNKLIINGRRLNV
KWGRSQAARGKEKDGVTESGIRLEPVPGLPGALPPPPVSDEDASTNYFNLPPTSSPAVMN
LGLPPPPGVAMPPPPGFGPPMFHTMDPMAPSMPPPMGMRPPGQVHYPSQDPQRMGAHASR
HGGP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtcgttaggatccaacacttacaacaggcaaaactgggaggattcggatttt
cccatcctctgtcaaacatgcttgggagaaaacccttatatccgcatgaccaaagagaaa
tttggcaaggagtgcaagatctgtgcgcgtccgttcacggtgttccgctggtgtcccgga
gtcaggatgcgctttaagaagacagaagtgtgtcagacctgcagtaaaatgaagaatgtc
tgtcagacctgcctcctggatctggaatatggcttgcccattcaggttcgtgacactggg
ctgtccgttaaagatgaagtaccgagatcggacgtgaataaggagtattacactcagaat
atggagagagagatcgctaactctgatggcacgagacccgtggggctgcttgggaaggca
ccgagcagcagcgatatgctgctgaaactggctcgtaccacaccgtactacaagaggaac
agacctcacatctgttccttttgggtgaaaggggagtgtaagagaggggaagagtgtccg
tacaggcatgaaaagcccaccgatccagatgacccgctggctgatcagaacattaaggac
cgttactatggcattaatgatcctgtggctgataaactcttgaagcgggcctccactatg
cccagactggacgtacctgaggacaagtccatcaccacgctgtatattggggggctggga
gaaaacgttactgattctgagctcaggaatcacttctaccagtttggggagattcgtacc
atcaccattgttcaaaggcagcagtgtgctttcatccagttcgccacacggcaggccgca
gagacggctgcagagaagtcctttaataaactcatcattaatggacgccggctcaatgtt
aaatggggcaggtcacaggcggctcgagggaaagagaaggatggggtgacggagagtgga
atccgtctggaaccagtgccagggctccctggtgctcttcctccaccccctgtatctgac
gaagatgcctccaccaattacttcaacctgcctccaaccagctcccctgctgtcatgaac
ctgggacttcctcctccacctggggttgccatgcccccaccacctggttttggtcctcct
atgttccacaccatggatcccatggccccttcaatgcctccgccaatgggcatgaggccc
cctggacaggtccactacccatcccaggatcctcagcggatgggcgctcatgcaagtcgc
catggaggcccctag
DBGET
integrated database retrieval system
