Rhinichthys klamathensis goyatoka (western speckled dace): 130095411
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Entry
130095411 CDS
T09701
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130095411 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130095411 (nup98)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130095411 (nup98)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130095411 (nup98)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130095411 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
TFIIA
Motif
Other DBs
NCBI-GeneID:
130095411
NCBI-ProteinID:
XP_056118122
LinkDB
All DBs
Position
Unknown
AA seq
1824 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTSSTFGQQNAGFGATGGFGSSAFGTANNTGGGLFGTTQNKPG
GLFGSSTFSQPVTSSTSSGFGFGAPSGTSNSLFGSTNTGSAGLFSQQNNAFGANKPASFG
TFGTSTSSGGLFGTTNTASNPFGGTSGSLFGASSFTAAPPGTTIKFNPPTGSDTMVKGGV
TTSINTKHQCITAMKEYENKSLEELRFEDYQAGRKGPSNPMAAGTGGLFGPTAAATPSTG
TGLFGSSAPNTGFNFGQNKTSFGTSTGAFGTTTGSLFGQPQQQQQQQQQQQQQQQQQQAS
SLFKPFGSATTTQNNTFSFGNTNTMGQPNTSTMQGLFGNTAASQAGGLFGNTNTSTAAGF
GTGIFGQTNTGFGNVGTQNLFGNKPAGFGTTTTSTPSFGTGTGLFANKPTLTLGANTNTS
TFGFGATGAGGGLFGNKTAATGLGTGLGTGFGGAVGTGQTSLFGNNQNKLGCTLGSMGTF
GTGGFNTGANTLNFGAPQQPVALTDPSAAAAQQAVLQQQINALAYSPFGDSPLFRNPLSD
PKKKEERLKPTNPAAQKALTTPTQYKLTPRPATRVRPKALSSSGSSKSQLFDGLDDDEPS
LNNGAFMPRKSIKKLVLKNLNNSSLYNNSVNREVDDLASPSEYPQNGLGLSMDDGETREV
TMERSGEDDLEVSKFYTNPITKPIPHGQPSPLLQDTISEFNMRGTASHRNGLEASSEEIS
LAEDSIQEERDEELEAQKPPHPAGIVLCRVGYYTIPSMEELGKMLNENGECILENFTVGR
KGYGSVFFSGEVNLTNMNLDEIVYFRRKEIIVYPDDKDKPPVGEGLNRRAEVTLDGVWPN
DKTTCCQIKSLERLNEMNYEGRLEAASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSD
EEEEAPPAKLDLKKLKTGGPLGISQLPLTQQQMAPQAQSTAVLELLSRVSELDSDMADIT
QEHPVDSVLGEEDGERTSLEENKLRSETPVEHEPVSASSQIASSMGINPHTLQIMKASLF
AEDDECDLFQEHGSSKLIMDVASPKVLLSGPGRPSIGALLQTKFTSGGGLFPQFPEAPFG
GIPQKLSKSLVSEAPWPSLGPSFLLPAPPPEPTLRTVGARRLGGPVPLEGSVTVGKGRLL
MDAALFRGRSFRVGWGPNWTLVHCGDQLSVTETMKEQAAESMGFGFLPKPTKSKQITESL
FKVRMEQVVGLEHKQSGESLALYHRPLEISLKYSTINIEDSCPFIQPARGVDALHGYAEW
IVEFNKDTGGGDAGLAHWQQIWTLCAALWGRLGDRDVETEQYSGYQQQLERRRSFSHWLS
VSAAECIEEEVGRALQRNHAEAVFSYLTGHCISKACKLSQKSGDHRLSLMLSQAVGSQFC
RDLLALQLTDWNRMQTDSFIEEERLRIVALLAGKPVWQSTDSVINVCSELDWKRCVAVHL
WYMLPPTASVADALAKYESAFQGSEEVKRYACPPLPPYVDELELLGLDEEMDETESKKPL
YDICFHLLKLYSDRHYSLQQLLDPSTVTADHLDYRLCWHLWNVLQALNYNHLSTSCQGLL
HTSYAAQLESAGFWEMAIFVLLHIPDSGRRESAVREMLNLHCPLEETEESMEKEQFLTEK
LLIPIQWIHQAKAIRACREGDKHREALHLYKAGHWNHCHRLVIQHLASDCIINDNHKYLL
EFLEGLAVPERSVQIQSWDTSGRVYLDYIHVIQTLQDIQQAESPGYALERLDTEVMSLCG
RIELLPCSKAKDRLAQSEMAKRVANILRVVLSLQQGGEGTPDPRHIPLCQLAPHIGRLPM
PEDYALEELRSLTQSYLQEYVISH
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaatcttttggtgctccctttgggggaggtacaggaggatttgggacttct
tctacatttgggcaacaaaatgctggctttggagcaacagggggctttggatcttcagcg
tttggtacggcaaacaacacaggaggaggactgttcgggaccacccagaacaagccaggt
ggtctctttggctcaagcactttcagtcagcccgtcacctcctccaccagtagtgggttt
gggtttggtgcccctagtggcacatcaaacagcctttttggaagcaccaacaccggaagt
gcaggactgttttcccagcagaataatgcctttggtgccaacaaaccagcctcgtttggc
acttttggtaccagcaccagtagcggtggattgttcgggacaaccaacacagcatccaac
ccatttggaggaacgtcaggctctttgtttggggcatcaagtttcactgctgcaccccct
ggcacaacaatcaaattcaatccaccaactggtagtgacacaatggtaaaaggtggtgtg
acaaccagcattaacaccaaacaccagtgcatcactgcaatgaaggaatatgagaacaaa
tccttagaggaattgaggtttgaggattaccaggctggaaggaagggtccttccaaccct
atggcagctggtacaggtggtctctttggaccgacagccgcagctactcccagtactggc
actggactctttggctcctcagctccaaacactggcttcaacttcggccagaacaagact
tcattcggcacgagcaccggggcatttgggacaaccacaggaagtttgtttggccagccg
cagcagcagcaacagcagcaacaacagcaacagcagcagcagcaacagcagcaagcttcc
agtctcttcaaaccatttggctcagccaccaccacccaaaacaacactttctccttcggc
aacaccaataccatgggccagcccaacaccagcaccatgcaggggctgtttggcaacacg
gctgcctctcaggccggaggactttttggaaacactaacacgagtaccgccgcaggcttt
ggcacaggaattttcggtcaaactaacaccggctttgggaatgtgggtacacagaatctt
tttggtaataagcctgctggatttggcaccaccaccactagcacaccctcctttggcaca
ggcactggtctgtttgcaaataagcctacactcactctaggggctaacacgaacacctca
acctttggattcggtgcaactggtgctggtgggggtctttttgggaacaaaactgctgca
acaggactgggaacaggattgggaactggcttcggaggagctgtagggactggtcagacg
tcattgtttgggaacaaccagaacaagctgggctgcaccttggggtcaatgggcaccttc
gggactggaggcttcaacaccggagccaacactctgaattttggtgctcctcaacagcct
gtggctctgactgaccccagtgcagcagccgctcagcaggctgtcctccagcagcagatc
aatgcattggcctactctccttttggagactcacccctcttcagaaacccactttcggac
cccaaaaagaaggaagagcgtctcaagcccacaaatccagctgcccagaaagccctgact
acccctactcaatacaaactgacccctcgtcctgccacccgtgtgcgtcccaaagctctt
tcctcctctggctcctccaaatctcagctcttcgatgggcttgatgatgatgaaccctct
cttaacaatggagccttcatgcctaggaagagcataaagaagcttgtgttgaagaacttg
aataacagcagtctgtataacaactctgtgaacagagaggttgatgatttagcttcccct
tcagagtacccacagaatggactcggtctgagtatggatgatggagagactagagaagtc
actatggagagaagtggggaggatgatctagaggtttccaagttctacaccaacccgatc
accaaacccattccacacggccagccaagccccttgctacaggacaccatctcggagttc
aacatgcggggaactgccagtcatcgcaatggcttggaggccagcagtgaggagatctct
ctggctgaggattccattcaggaggaaagagatgaggagctggaggctcagaaacctcct
cacccagctggtatagttctttgccgtgtaggctactacaccatcccatccatggaagag
ctgggaaagatgttgaatgaaaacggggagtgtattttggagaacttcactgttggcaga
aagggctatgggtccgttttcttctctggtgaggtgaatcttaccaacatgaacctggat
gagattgtgtacttccggcgtaaggagataatcgtgtaccctgatgacaaagacaagcct
cctgttggagagggactaaacagacgtgctgaagtgactctagatggtgtgtggcccaat
gacaagacaacgtgctgccagatcaagagtctagagaggctgaatgagatgaactacgag
ggccggctcgaggcagcctcgcgcaaacaaggtgcacgcttcttggagtaccgacctgaa
actggatcctgggtctttgaggtggcccacttctcaaagtatggcctgcaggattctgat
gaagaagaggaagcccccccggccaagctggacctgaagaagctgaaaaccgggggcccc
cttgggatctcacagcttccactgacccagcagcagatggcgccacaggctcagagtact
gcagtacttgagctgctcagccgtgtgtcggagttggacagtgacatggccgacattact
caagagcaccccgtggacagtgttttgggtgaggaggatggagagagaacttcattggag
gagaacaagctgagatctgagactcctgttgagcatgagcccgtgtctgcatccagccag
attgcttcctcaatgggcatcaaccctcataccttacagattatgaaggcctctctcttt
gcagaggatgatgaatgtgacttgtttcaagagcatggttcttcaaagctcataatggat
gtggcttcccccaaagttttgctttctggacctggtcggccatcaatcggagccctgtta
caaacaaagttcacctcaggtggagggctttttccccagttcccagaggctccttttggt
ggaatacctcagaagcttagcaagtcacttgtgtctgaagccccatggccatcattgggt
ccatccttcctgttgccggcccctcctccagaacctacgcttaggaccgtcggggcccgt
aggctaggtgggccagtgcctctggagggctccgtaactgtagggaaaggccgtttactg
atggacgcggctctgttcagaggccggtctttcagagtgggctggggtcccaactggaca
ctggtgcactgtggagatcaacttagtgtcacagaaacaatgaaggagcaggcagcagag
agcatgggttttggcttcttacccaaaccaaccaaaagcaaacagatcactgaaagtctg
tttaaggtgcgtatggagcaggtggtcggcctggagcacaagcagtcaggtgagagcctt
gctctttaccacaggccactggagatcagtctaaagtacagcacaatcaacatagaggac
tcctgtcctttcattcagcctgcgagaggagtggacgctctgcatggttatgcagaatgg
attgtggagttcaacaaagatacaggtggaggggatgctggcctggcccattggcagcaa
atttggactttgtgtgctgccctgtggggtcgtcttggtgaccgagatgtggagactgag
caatactcgggctaccagcagcagcttgagaggcggaggagcttctcacactggctctct
gtaagtgcagccgagtgtatagaggaggaggtgggccgggctcttcagcgcaaccacgct
gaggctgttttcagttaccttaccggccactgcataagcaaggcctgcaaactgtcccag
aagagtggggaccatcgcctttcactgatgttgtctcaggctgtgggctctcagttttgt
agagatctactggctctgcagctcactgactggaacaggatgcagacagactccttcata
gaagaggagaggctgcgaatcgttgctttgcttgcaggcaaaccagtgtggcagtcaaca
gacagcgttataaacgtgtgctccgagcttgactggaagcggtgtgttgctgttcatctc
tggtacatgctgcctcccactgcctctgtagctgatgctctcgccaaatacgagtctgca
tttcagggttcagaggaagtgaaaaggtatgcttgccctcctttacctccctatgtagat
gaactcgagttgttgggtttggatgaagagatggatgagactgaatccaaaaagccactc
tatgacatctgcttccacctacttaaactttacagtgacaggcattacagcctacaacag
ctacttgatcccagcacagtaactgctgatcatctggattaccggctgtgctggcacctg
tggaacgtgttgcaggctcttaactacaatcacctgtccacctcatgccagggcttgctg
cacaccagctatgctgcccagctggagagtgcgggattttgggagatggctatcttcgtg
ctgctgcacatacctgactctggacgtagagagagtgcagtgcgggagatgctcaactta
cactgcccccttgaggagacagaagagtcaatggagaaggagcaatttcttacggaaaag
ttgctgatccccatccagtggatccatcaggccaaggccatccgtgcctgcagagaggga
gataaacatcgtgaagccttgcacctttacaaggccggccactggaatcactgccatcgg
ctggtcatccagcacctggcctcagactgcataattaatgataatcataagtacctgttg
gaattcctggaggggttggcagtgccagagcgcagtgttcagattcagagctgggacaca
tctggacgggtctaccttgattacatccatgtcatccagacactgcaggacatccaacag
gctgaaagcccaggttatgcgctggagcgactggatacagaggtgatgtctctctgtggg
agaatagagctcctcccctgctccaaagctaaagacagacttgcccaatcagagatggcc
aaacgtgtggctaacatcctccgagtggttttgagtctccagcagggtggtgaaggcacc
ccggatccccgacacatccctctttgccagcttgctccacacattggacgtctacccatg
ccagaggactatgctttagaggaactccgcagccttactcagtcgtacctgcaagagtat
gttatcagtcactga
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integrated database retrieval system
