Rhinichthys klamathensis goyatoka (western speckled dace): 130095442
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Entry
130095442 CDS
T09701
Symbol
srsf1b
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03040
Spliceosome
rkg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130095442 (srsf1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130095442 (srsf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130095442 (srsf1b)
Spliceosome [BR:
rkg03041
]
Common components
Common spliceosomal components
SR proteins
130095442 (srsf1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
130095442
NCBI-ProteinID:
XP_056118155
LinkDB
All DBs
Position
Unknown
AA seq
250 aa
AA seq
DB search
MSGGVIRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEF
EDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGGGGGGGVGAPRGRYGPPS
RRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLD
NTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSHSRSRSRSNSRSRSYSPRRSRGSPRYS
PRHSRSRSRT
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcggtgtaattcgagggcctgcagggaacaacgactgtcggatttacgtgggt
aatttaccccccgatattcgcaccaaggacgtagaggatgtgttttataaatacggagcc
attcgggatatcgaccttaaaaacagaagaggcggtccaccgtttgcattcgtggagttc
gaagacccgagagatgctgaggatgctgtatatggacgagatggctatgactatgacggc
tatcgtcttcgagtggagttcccaagaagtggcaggggaggtggaagaggtggtggtgga
ggtggtggtggaggtggtggcggcgttggagctcccagaggcagatatggccctccatcc
aggcgttcggagtacagggtcatagtgtcaggacttcctcctagtggcagctggcaggac
cttaaggatcacatgcgtgaagcaggtgatgtatgttatgctgacgttttccgagatggc
accggcgttgtggagtttgttcgcaaagaagacatgacctacgccgttcgaaagctggat
aacactaagttccggtcacatgagggggagacggcttacatccgcgtaaaggtggatggc
ccgcgcagtcccagttatgggcgctcgcgctcacgcagccacagcaggagtcgcagcagg
agcaacagccgcagtcgcagctactctccacgccgcagccgaggatcaccacgttactcg
ccccgccacagccgctcccgttcccgcacctaa
DBGET
integrated database retrieval system
