Rhinichthys klamathensis goyatoka (western speckled dace): 130095453
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Entry
130095453 CDS
T09701
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rkg03009
]
130095453 (ddx52)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130095453 (ddx52)
Ribosome biogenesis [BR:
rkg03009
]
Eukaryotic type
90S particles
Helicases
130095453 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
130095453
NCBI-ProteinID:
XP_056118166
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MDAVDLFRKLGSGAKFDLKRFAKDAERFKVVKSQSKYSSQQLAETSFFGTETQENASLES
RLSEDDGEEGKEGSDEEQASGKRKRTEVDEPVKAARKKKKGAKRKSEDTEPEKSAEEGIQ
WMSSQDTAKDTKKESKDKLSLKRLKQLHQEKVNRVRNQNRINVHGTDIPDPVSTFEELQK
EYDLDPRVIQNIKTAGFQTPTPIQMQAIPLMMHKREILACAPTGSGKTMAFCLPLLAHLR
QPLNKGFRALIISPTRELATQTHRELLKLSEGVGFRVHMINKGVDAVKKYGPKSAKKFDI
LVTTPNRLIYLLNQDPPAINLSCVEWLVVDESDKLFEDGKRGFREQLATIFLACSSPKIC
RVLFSATFATDVEKWCKLNLDNLVSVNIGPRNSAVDTVEQQLLFVGSENGKLLAMRNLIK
QGFLPPVLIFVQSIDRARELFHELVYEGINVDVIHADRTQQQRDNVVSSFRSGKIWVLIC
TALLARGIDFKGINLVVNYDFPTTAVDYIHRIGRTGRAGHKGKAITFFTEDDKPLLRSIA
TVIKKAGCPVPDYMIGLKKIKRKLKRQLVTKPPRRSTIRTTPRMLFEKKIGKGKRKKRKA
ADKEAEAKGEPSEVVSNS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcgacttgtttagaaagcttgggtctggagcaaagtttgatctgaaaagg
tttgctaaagatgcagagaggtttaaggtagtgaagtctcagagcaagtacagctcacaa
cagctggctgaaaccagcttttttggcacagagacacaagagaacgcttctctggagtcc
agacttagtgaagatgatggtgaagaagggaaagaagggagtgatgaagagcaggcctct
ggtaaacggaaacgtactgaagtggatgagccagtgaaggctgcacggaagaaaaagaaa
ggagctaagagaaaatctgaagacacagaacctgaaaagagtgcggaagaggggatccag
tggatgtcatcgcaagacactgcgaaagacaccaagaaagagtctaaagacaagctctct
ttgaaaagactaaagcagcttcatcaggagaaggtgaatcgggtacgtaaccagaaccgg
attaacgtgcacgggacagacattccagatcccgtttccacttttgaggagctgcagaag
gagtatgatctggacccacgagtcattcaaaacatcaagacagcgggtttccaaaccccc
acacccattcagatgcaggccattcccctcatgatgcataaaagggagatcctggcatgt
gctcctactggctctggtaagactatggccttctgtctgcccctgctggcccaccttcgc
cagcccctcaacaagggtttcagagccctcatcatctcccccaccagagagctggccact
cagactcacagagagttgctcaaactgtcagaaggagtgggcttcagagttcacatgatc
aataaaggagttgatgctgtaaaaaaatatgggcccaagtcagctaagaaatttgacata
ttggtgacgacccctaacagattgatatatttattaaatcaagaccctcctgcgatcaac
ttaagttgtgtggagtggctggtggtggatgagtctgataagctctttgaggatgggaag
aggggtttcagagagcagcttgccaccatcttcttggcctgctcttctcccaaaatatgc
cgggttctcttcagcgcaacctttgccacagacgtagagaaatggtgcaaactcaaccta
gacaacctcgtgtctgtcaacattggacccagaaactctgcagttgatactgtggagcag
cagctgctgtttgtgggttcagaaaatggaaagctacttgccatgagaaaccttataaag
cagggttttttgccgccagtgttgatctttgttcagtctattgaccgtgcccgagagctc
ttccatgagctggtgtacgaggggataaacgtggacgtgatccatgcggatcgtacacaa
cagcagagggacaatgttgtgagcagtttccgttcggggaagatctgggtgctgatctgc
acggctctgctggctcgtggaatcgacttcaagggcatcaacctggttgtcaactacgac
tttcctaccactgctgtggactacatccaccggatcgggcgaacaggaagagctggacac
aaaggaaaggcaataactttcttcacagaggatgacaagcctctccttcgcagcattgct
actgtcataaagaaggctggatgtcctgtccctgactacatgatcgggttgaagaaaatc
aaacgcaaattgaaacgtcagctcgtgacaaaaccacccagacggtcaactattcgcaca
acgcctcgcatgctctttgagaaaaagatcggcaagggaaaaaggaaaaaaagaaaagct
gcagacaaagaagctgaagcaaaaggcgaaccatcagaagttgtttctaacagctga
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