KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130095465
Entry
130095465         CDS       T09701                                 
Symbol
pafah1b1b
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00565  Ether lipid metabolism
rkg01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    130095465 (pafah1b1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rkg03036]
    130095465 (pafah1b1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rkg04147]
    130095465 (pafah1b1b)
Chromosome and associated proteins [BR:rkg03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    130095465 (pafah1b1b)
Exosome [BR:rkg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   130095465 (pafah1b1b)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_EML Beta-prop_Vps41 Beta-prop_DCAF4 WDR90_beta-prop_4th WD40_RFWD3 LisH Beta-prop_RIG_2nd Beta-prop_SPT8 LisH_PAC1 Beta-prop_IFT140_1st Beta-prop_DCAF12 eIF2A Beta-prop_WDR35_TULP_N Nucleoporin_N Beta-prop_NUP159_NUP214 Pox_A_type_inc ARMC9_LisH LisH_2 SutA-RBD DUF2570
Other DBs
NCBI-GeneID: 130095465
NCBI-ProteinID: XP_056118181
LinkDB
Position
Unknown
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEITLGGPVAQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQAGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSE
NKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDFHKTSPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacagaggcaacgagatgaactaaatcgagcaatagcagattatctgcgc
tccaatggctacgaagaggcatattctgtttttaagaaggaggcagagttagatatgaat
gaggagttggataagaagtatgctggccttttggaaaagaaatggacttcagtcatcaga
ttacagaaaaaggtaatggagttggagtccaaactaaatgaagctaaggaggagatcact
ttaggaggccccgtggcacagaaacgagaccccaaagagtggatcccacgcccgcctgag
aagtacgccctcagcggtcacagaagccctgtcacacgcgtcatcttccaccctgtgttc
agcctcatggtctccgcctcagaggacgccactataaaggtttgggactacgaggctggg
gatttcgagcggaccctgaagggtcacactgattcagtgcaggacatctcctttgaccag
gctggaaagctgctggcttcttgctccgcggacatgaccatcaaactgtgggacttccag
ggcttcgagtgcatcaggaccatgcacggacacgatcacaatgtgtcgtcggttgccatc
atgcccaacggggatcacatagtgtctgcttcaagggataagaccatgaaaatgtgggaa
gtggccactggttactgtgtgaagacgttcacgggtcacagggagtgggtgcgtatggtc
cggcccaatcaagacggcacactgttggccagctgctctaatgaccagacggtgcgcgtg
tgggtggtggccaccaaggagtgcaaggcggagctgcgggagcacgagcatgtggtggag
tgcatctcctgggcccctgagagcgcacaccccaccatatctgaggctacaggctctgag
aacaagaagagtggaaagcctgggccattcctgttatctggatccagagacaagaccatt
aaaatgtgggacataagtactggcatgtgccttatgacactggttggccatgacaactgg
gtgcgtggagttctgttccatccgggtgggagattcgtagtgagctgtgctgatgacaag
accctccgtatctgggactataagaacaagcgctgcatgaagaccctgtgtgcccacgaa
cactttgttacctctctggatttccacaagacttctccttacgtggtgacaggaagtgta
gatcaaacggtcaaagtgtgggaatgtcgctga

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