Rhinichthys klamathensis goyatoka (western speckled dace): 130095546
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Entry
130095546 CDS
T09701
Symbol
cnot8
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130095546 (cnot8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rkg03019
]
130095546 (cnot8)
Messenger RNA biogenesis [BR:
rkg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130095546 (cnot8)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130095546 (cnot8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
130095546
NCBI-ProteinID:
XP_056118282
LinkDB
All DBs
Position
Unknown
AA seq
285 aa
AA seq
DB search
MPAALADTSQIICEVWASNVEEEMRKIRQIIQNYNYIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLTFMNEEGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDTRLPEEEHE
FFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSSQSQNGISNSSQEEANNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgcacttgcagataccagtcaaattatctgtgaggtatgggccagcaatgtg
gaggaggagatgaggaagatccgacagatcattcaaaactacaactacatcgccatggac
acagagtttcctggcgttgtagttcgtcccattggagagtttcgcagtactgttgactat
cagtaccagctcctgaggtgcaacgtggaccttttaaaaatcatccagctgggtttgacg
tttatgaatgaagagggagactacccgcctggaaccacaacatggcagttcaacttcaag
ttcaatctgacagaggacatgtactcccaggactccatagatctcctccagaactctggg
ctgcagtttaagaagcacgaggaggagggcatcgacacactctacttcgcagagctcctg
atgacgtcaggcctggtgctgtgtgaaaatgtcaagtggctctcctttcacagtggatat
gattttggatacctggtgaagctcctcacagacacccggctgccagaagaggaacacgag
ttctttcagatcttaaaccttttcttcccagccatttacgacgtcaaatatcttatgaag
agctgcaaaaacctcaagggtggacttcaggaggttgcggaccagctggagctgaaaagg
atcggcaggcagcatcaggccggctcggactcgctgctcactggaatggctttcttccgc
atgaaagagctgttttttgaagacaacatcgacgatgccaagtactgtgggcgactctat
ggcctgggatccggttcctctcaaagtcagaacggaatctccaattcctcgcaggaggaa
gccaacaacaagcactga
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