Rhinichthys klamathensis goyatoka (western speckled dace): 130095547
Help
Entry
130095547 CDS
T09701
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130095547
04121 Ubiquitin system [BR:
rkg04121
]
130095547
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130095547
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130095547
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
Lipoprotein_3
hAT-like_RNase-H
GSH_synth_ATP
Motif
Other DBs
NCBI-GeneID:
130095547
NCBI-ProteinID:
XP_056118286
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MAEREQLLPKKCSSTSVVWSWYGFTESDEEQKIPRCKLCLKAVVVAGSSTTNLFQHLKRK
HAAEWEKCRRLRSENDSSGVSASTPLAKQTTLQQSFSSSVPYEKSGARWKAITEAITLYI
ATDMLPVYSVEKRGFNNLLKVLDARYTVPSRKYFSDVALPQLYNNTRQKIISELKGIYFY
AATTDLWSSRTMQPYMCLTVHYVSESWEMRSVCLQTSYFPQDHTGQTIAQELKDALNSWG
LSEERLSCMTTDSGSNVIRAMKDNNWPNLKCFGHRLHNAVVNGVKDERIDRAIGVCKKAV
SAFSYSWKKRRDMAEVQAELGLPPHQLVTESLTRWGSRQKMIDRLLEQERAISRVLGADK
KTRHLVPTWQDLEVLDATNKAIKPLQDFTDALSGESYVSVSYIKPVLHLFKTSLLQREEK
DVDLTATIKRNIMCYLEQKYSDPENDELLDMASLMDPRFRTTYITLDKLDIVKKRAVTEL
SALCSEEEGPTVQMCQEESPPKKKTLAAFFKKAAPAASLSHQSTKEKFEAELTSYLLGPE
VDPDTNPLEWWKQHQPNFTRLSHLAKKYLAIPATSAPSERVFSVGGGIVTYSREETEPFK
ESPMVTARFRETPQIEVIKGSGVFCQAEAWKAARLATSATAMVRDLLLGTFDLETEWY
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagagagcagctccttccgaagaaatgctcatcgacgtcagtagtgtggagt
tggtatggatttacagaatctgatgaggaacagaaaatacctcgatgcaaactttgtcta
aaggctgttgttgttgctggtagcagtacgacaaatctgtttcagcatttaaagcggaaa
catgcggctgagtgggagaagtgtcgccgccttcgatcagaaaacgactctagtggcgtt
agcgctagcaccccgttagcaaagcaaacaactcttcaacaaagcttttcaagcagtgta
ccgtatgagaagagcggggcaaggtggaaagccataacggaggcaattaccctctacata
gctacggatatgctgccagtttactctgttgagaagagagggtttaacaacttgctgaaa
gttttggacgctcgatatacagtacccagccgcaagtatttctctgatgttgctcttcct
cagctgtataacaacactcggcaaaagataataagcgagttgaagggaatttacttttac
gctgccactactgacctgtggtcgagccgaaccatgcagccttacatgtgtcttacggtt
cattatgtcagcgagagctgggagatgcgaagcgtctgtctccaaacgtcatatttccct
caggaccatacgggccaaactattgcacaagagttaaaggatgctctgaactcctggggc
ctttcagaggagcgcctttcctgtatgacgaccgacagtggctccaatgtaatcagggct
atgaaggacaataattggccaaacctcaagtgctttggacatcgactgcacaatgctgtc
gtgaatggtgtgaaagatgaacggattgaccgtgccattggagtgtgtaaaaaggcagtt
tctgctttttcatacagttggaaaaaaagacgggacatggcagaggttcaggcagagctg
ggtcttcctcctcatcaactggtaaccgagtcactgacaagatggggttcgcgccaaaaa
atgattgatcgtcttctcgaacaagagagagccatcagccgtgttctgggtgctgataaa
aagacccgccatcttgttcctacatggcaagatctggaggttttagatgccacaaataaa
gcgatcaaaccccttcaggactttactgacgcgttgtccggagaatcttatgtaagcgtt
tcatacattaaacctgtgctgcatctgttcaaaacaagtctccttcagcgagaagagaaa
gatgtagatctcaccgctacaataaaaagaaacattatgtgctaccttgaacagaaatac
agtgaccctgagaatgacgagctcctggacatggcttctctaatggatccacggttccgt
accacctacattaccctggacaagttggacattgttaagaaaagagcggtcactgagctt
tctgccctctgctcagaggaagaaggtcctactgtacaaatgtgtcaagaagagagccca
cctaagaagaaaactttagctgccttcttcaagaaagcagcacctgctgcatcactgtcc
caccagtcaacaaaggagaaatttgaagcagagctcacctcctacttactgggtcctgag
gtggatcctgacactaacccacttgagtggtggaagcagcatcagcccaacttcacaaga
ctcagtcatctggcaaaaaaatacctggccattccagcaactagcgccccatcggagagg
gtctttagtgtgggtgggggtattgtcacctactccagagaggagaccgagccctttaaa
gagagtcccatggtgactgcgcgctttcgagagacaccacagattgaagttataaagggc
tctggggtgttttgccaggcagaagcgtggaaagcagcccgccttgccacctctgccact
gctatggtgcgggatctgctgctgggcacctttgatttggagactgaatggtactaa
DBGET
integrated database retrieval system
