Rhinichthys klamathensis goyatoka (western speckled dace): 130095709
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Entry
130095709 CDS
T09701
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130095709
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
DSCAM family
130095709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
C1-set
Ig_5
Pur_ac_phosph_N
V-set_CD47
Ig_6
Receptor_2B4
Sp38
fn3_2
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
130095709
NCBI-ProteinID:
XP_056118439
LinkDB
All DBs
Position
Unknown
AA seq
2158 aa
AA seq
DB search
MTVPRRGGYERRDQSLPRFSALTSRGLGLERSPGSIVTTPARSLAWPNTAQCTRRDCKTF
LRNIPAIYGMWLVTLLLLYSFQEVHSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGG
APHAVLRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENQAGK
IRSPSIRVKAVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPG
NRFFLTSYGALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVLDPTESPPSVMDS
FQSGEVQVGRSIELPCIASGYPNPTIRWLKDGRPLPADSRWTRRLTGLTISDLRLEDSGN
YICEVTNSFGSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTVSWFRN
TEPIVPDQHFSIQGAHNETLFITAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIV
SSFSERVVAPGEPFSLMCAAKGAPPPTITWTLDDEPVARDSAHRASQYTLSDGSTVSHVN
VTNPQIRDGGVYRCAARNSAGSAEYQARINVRGPPSIRAMRNITAVAGRNTFINCRVIGY
PYYSIKWYKDIVPLPDNHRQVVYENGTLKLSDVQKGMDEGAYQCSVLIQPQLSISQTVYV
TVKVPPLIQPFDFPPTSIGKLMYIACVVSSGDMPIRITWRKDGQEIVSGTSGVTIETKEF
MSSLQISKVSLEHNGNYTCIASNDAATVSSERQLIVTVPPGFLVQPNNQDGIYGKSEVLN
CSVKGYPPPKVVWKHAKGIGNPQQYHPVPLTGRIQILSNGSLLIRHVLEEDRGYYLCQAS
NGVGSDISKSMMLTVKIPAMITSHPNTTMAIKGQNKELNCTARGEYPIIIRWERGDTVID
PDRNPRYSITTSPNEKSDEVISTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEPP
DPPELEVREVKDRSMNLRWTQRFDGNSIITSYDIEYKNKSDPWELKHATRKISPTNNQAN
IVELHPASVYSIRMYSYNKIGRSQASKELTISTEEAPPDGPPMEVILQPMTSQSIRVTWK
APKKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQA
FNRAGTGPSSSEINATTLEDVPSQPPQNVRAITVTSDEAVITWSEPPRMTLNGVLKGYRV
VFWSLYPDGGGCCGGQTLGLNQKWGEMQNITTTREQVELKGLEKFTNYSIQVLAYTQAGD
GVRSNVLYIQTREDHPGPPAGIKAVPSSASSVVVSWLPPIKPNGIIRKYTIYCSSPGSGQ
PAPSEYEANPELLIYRITHLTRGQQYLIWSAAVTTAGRGNISEKVTVEPAGKAPAKILSF
GGTVTTPWMKEVRLPCSSVGEPTPTIKWTKDSEDTAIPVTQDGHRNILSNGTLVLRSVKA
EDSGYYTCTATNTLGFDTIIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRG
FVLQYSVDNTEEWKDVFISSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEIIEAKTH
GREPQFNKDQPLFTHINSTHARLNLQGWTSGGCPITAVLLEFRPKGTWAWQSVRTNASAD
IFLAELREATWYELKMKACNSAGCGNQSSQFATLDYDGSTIPPIKSARGEGDDVKKLFSI
GCPVILVTLGMALLFIIRKKRKEKRLKRLRDAKSLAEMLISSKNNRSFDTPVKGPPQGPR
LHIDIPRVQLLIEDKEGIKQIGEDKATIPVTDTEFSQSVNPQSFCTGVSVHHPALIQNTG
PLIDMSDIRPGTNPVSRKSVKSAHSTRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHG
ITVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFEITEC
FISDSSSDQMTTGTNDNADSMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRAN
KSEYCNLPLYMKTDPFFRKQAELHDPCPVVPPREASIRSLAARAYHTQGRHMTLDPSKQQ
ALTLGHGGLSSLTSSGASGTSGPASSGAAGSSSISSGTATLPQRTLTMPSTSSTSSAPSG
AVAAGAGASASSTGGSGLTPGSSKVGGSRDSLLESSSSGLGRLQKQNAGAYSKSYTLV
NT seq
6477 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcccgcggaggggagggtacgagaggcgggaccaaagtcttccccgcttctcg
gcgctgacgagtaggggactagggctggagagatcgccggggagcatcgtcaccactcct
gcacggagcctcgcctggccgaatactgcacagtgcacacgtcgggattgcaaaacattc
ctgagaaatatacctgctatttatggcatgtggctggtaactttactcctgctgtattct
tttcaagaagtgcacagcgaggatgtggtctcgacgcggctgtactttgtgaatgcttcc
ctgcagagagtgaccttctccagctcagtgggggtgtccctgccctgtcctgcgggtggc
gccccccatgccgtcctccgctggtacctggccactggcgacgacatctacgacgtgcca
cacatccgccacgttcacgccaacggcacgctgcagctctaccccttctccccctctgcc
ttcaacagcttcattcatgataatgactacttctgcactgccgagaaccaggccggcaag
atccgcagccctagcatccgtgtcaaagcagtgttcagggaaccttacacggttcgcgtg
gcggaccaaaggtccatgcggggcaacgtggccgtcttcaagtgcctcatcccctctgct
gtgcaggagtacgtcagtgtggtgtcctgggagaaggacactgtctccatcgtcccaggt
aacaggtttttcctgacatcatatggggccctctacatatctgacgttcagaaagaggac
gccctctctacataccgctgcatcaccaagcacaaatacagcggagaaaccaggcagagc
aatggggctcgtctctctgtgctggaccccactgaatccccgccttctgtgatggacagt
ttccagtcaggagaggtacaagtggggcgcagcatagagttgccctgcatcgcctccggg
taccccaaccctaccatccgctggctgaaggatgggaggccgcttcctgctgactcccgc
tggacgcggcgactgaccggcctcacaatcagcgatctccgcctggaagactccggaaac
tacatctgtgaagtcaccaacagcttcggctccaaagaggtcacaggacaccttaatgtc
atcgagcctctgagagtcactttatcccccaagaacctgaaaacaggcatcagcagcaca
gttattctttcatgtgctgttcagggctcgccccactttaccgtctcctggttccgcaac
acagaacccatcgtgcccgaccagcacttctccatccagggtgcccacaacgagacactc
ttcatcacggcagcccagaaaagacactcaggggcatatcagtgctttgccacccgcaag
ggtcagaccgcacaggacttctccatcatactgcttgaggacggcaccccgcggatcgtc
tcgtcttttagtgagcgcgtggtagcccctggcgagcccttctccctcatgtgtgcagcc
aaaggcgcccctccccccaccatcacctggacgctggacgacgagccggtagcgcgggac
tcggcgcaccgggccagccagtacacgctctccgacggctccactgtctcgcacgtgaat
gtcaccaacccccagatccgcgatgggggcgtgtaccgctgcgccgcacgcaactcggcc
ggtagcgccgagtaccaagcgcgcataaacgtaagaggtcctccaagtatccgggccatg
cggaacatcacggccgtggcgggtcgcaacacttttattaactgtcgtgtgattggttac
ccctattactccatcaagtggtataaagatatagtgccattgccagacaaccatcgtcag
gtggtgtacgagaatggcactctgaagttgagcgatgtgcagaagggcatggatgaggga
gcgtatcagtgcagtgtgctcatccaaccccagctctccatcagccagactgtctacgtc
acagtcaaagttcctcccctcatccagccctttgacttccctcccacctccattggtaag
ctgatgtacatagcgtgcgtggtgtcctccggagacatgccaatccggatcacctggagg
aaggatgggcaggagattgtgtcgggaacatcaggagtcaccatcgaaacaaaggagttc
atgagttcccttcagatctccaaagtttctctcgagcacaacggaaactacacctgtatt
gcaagcaacgacgcagcaactgtcagttcagagagacagctcattgtaacagttccccct
ggttttctggttcagcccaataaccaggatgggatctatggcaagtcagaggttctgaac
tgctctgtgaaagggtaccctcctcccaaagttgtctggaagcatgccaaaggtataggg
aacccccagcagtaccacccagttccactgacgggtcgcatccagatcctgtccaatggt
tctctgctgatccgccacgttctagaggaagaccggggatactacctgtgtcaggccagc
aacggagtggggtccgacatcagcaagagcatgatgctcaccgttaaaattccagctatg
atcacatcccacccaaacaccaccatggccataaaagggcagaacaaggagttaaactgc
accgcccggggtgagtaccccatcatcatccgctgggagcgaggcgacactgttattgac
cccgaccgcaaccctcgatactccatcaccaccagccccaacgagaaaagcgatgaagtt
atctccacactgaagctgaagccagcggagcgcggggattccgtctttttctcctgtcac
gccatcaactcatacggcgagggcagagggctcatccagctgacggtgcaagaaccccct
gaccccccagagctggaggttcgagaggtcaaagatcggagtatgaacctaaggtggacg
cagcggtttgacggcaatagcatcatcaccagctacgacattgagtacaagaacaaatcc
gacccgtgggagctgaaacatgccacccgtaagatctcgccaaccaacaaccaggccaac
atagtggagctccacccggcgtccgtgtacagcattcgcatgtactcctacaacaagatt
ggacgcagtcaagccagcaaagagctgaccatcagcacagaggaagcacctcctgatggg
ccacccatggaggtgattttacagccaatgacttctcagagtatccgtgtcacttggaag
gcacctaaaaaagagctccaaaatggagtgatccgtggctatcagatcggttatagggag
aatggaccgggcagtaatggacaatacagtatagtggagatgaaagccacaggtgatagt
gaggtgtacacactggataacttgaagaagtttgctcagtacggcgtggtcgtccaggcg
ttcaaccgagccggaaccggaccttccagttctgagatcaatgccacaacactggaagat
gttcccagccagccaccccaaaatgtgcgggccatcacggtgacatcggacgaggcggtg
atcacgtggtcggagcccccgcggatgaccctgaatggggttctgaagggctaccgtgtg
gtgttctggtccctctaccccgatggaggtgggtgctgtgggggccagacactggggctc
aaccagaaatggggagagatgcagaacatcactaccactcgcgagcaggtggagctgaag
ggtttggagaagttcacaaactacagcattcaggtcctggcctacacacaggcaggagat
ggcgtccgcagcaacgtactctacattcagacccgagaagaccaccccggccctccagcg
ggcatcaaagcagtgccatcctctgcctccagtgtggtggtatcctggcttccccccatc
aagcccaatggtatcatccgaaaatacacaatttactgttccagccctggatcgggccaa
ccggcacccagcgaatacgaagccaaccctgagctgctgatatacagaatcacccacctg
acccggggtcagcagtatctgatctggtcagccgccgtcaccactgctggtcggggcaac
atcagcgagaaggtgactgtggagcctgctgggaaagctcctgctaaaatcctatctttt
ggtggaacggtgaccactccatggatgaaggaagtccggctgccgtgcagctcggtggga
gagccgacacctaccatcaaatggaccaaagacagtgaggacactgccattccggttact
caggatggtcacaggaacattctttcaaatggtaccctggtgctacgttctgtgaaagcc
gaggattctgggtactacacctgcacagcgaccaacacgttggggtttgacacaatcatc
gtaaacctgctggtacaagtgcctccagatcaaccacgtttgacagtttccaccacgtcc
acttcttctatcactctggcttggatccctggagacaatggaggaagctccatcagaggt
ttcgtgctgcagtattcagtagataacactgaggagtggaaggatgtcttcattagctca
agcgaacgctctttcaagttggacaacttgcgctgtggaacctggtacaaagtcaaactg
gcagctaaaaacagtgtgggagccggtcgcatcagcgagatcattgaggccaagactcac
ggcagagagccgcagttcaataaggaccagcccctcttcactcacatcaactccacccac
gcccggctcaacctgcagggctggacgagcggcggctgccccatcactgctgtccttctg
gagttccgtcccaaaggcacctgggcctggcagagcgtgcgcaccaacgcctctgctgac
atcttcctcgctgagctgcgtgaggccacctggtatgagctgaagatgaaggcgtgcaac
agcgccgggtgcgggaaccagagctcacagtttgccacgctggattatgatggcagcact
attccgcctattaagtcagcgcgaggggaaggggacgatgttaaaaagcttttctctatc
ggctgcccagtcatcctggtcacgttaggcatggcgctactctttattatccgcaagaaa
cgcaaagaaaagagactcaagagactcagagatgctaagagcttggctgagatgcttatc
agcagtaagaacaatcgaagttttgacactccagttaaaggcccacctcagggaccccga
ctgcacatagatatccctcgcgtgcagctgctcatcgaggataaagagggaatcaaacag
ataggtgaagacaaggccaccatccctgtgacggacactgagttcagccaatcagtgaac
cctcagagcttctgtacgggtgtgtctgtgcatcaccccgccctcatccagaacactggg
cctttgattgacatgtcagacatccggcctggcaccaatccagtatcgaggaagagcgtg
aagtctgcgcacagcacaaggaaccgctattccagccagtggactctgacgaaatgccag
gcctccacacctgctcgcactctcacctcagactggcggacagtgggctcccagcacggc
atcacggtcacagagagtgacagctacagcgccagcctgtcccaggacacagataaggga
cgtaacagtatggtgtccaccgagagtgcgtcttccacatacgaggagctggcccgagcg
tacgaacacgctaagctggaagaacacctgcagcacgccaagtttgagatcacagagtgc
ttcatctcagacagctcctctgatcagatgaccaccggaaccaatgataacgcagacagc
atgacctctatgagcacaccatccgaaccgggcatctgtcgcttcactgcctccccaccc
aaaccacaggactacgaccgcggcaaaaatgtggcagtgcccattccccaccgcgccaac
aagagtgagtactgtaacctccccctatacatgaagacggaccctttcttccggaaacaa
gcagagctgcacgacccttgccctgtggtcccgccccgcgaggcctccatccggagcctc
gctgcccgggcctaccacacacagggccgccacatgacattagacccctccaagcagcag
gccctgacgctgggccacggtggcctgagcagcctgaccagctcaggggcctctggtacg
tcgggcccagcctcaagcggggccgctgggagctccagcatcagctcaggcacggccacc
ctgccccagaggactctcaccatgcccagcacctcctccacctcctcggcccccagcggg
gcggtcgccgctggagcaggagccagtgcaagctccacgggaggcagcggcctaacaccc
ggcagctccaaggtcgggggatccagagactctctgctagagagcagctcgtccggcctg
ggaagactgcaaaagcagaatgctggggcgtactccaaatcctacactctggtgtag
DBGET
integrated database retrieval system
