Rhinichthys klamathensis goyatoka (western speckled dace): 130095970
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Entry
130095970 CDS
T09701
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130095970 (rnf169)
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130095970 (rnf169)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
130095970 (rnf169)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
130095970 (rnf169)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
130095970 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
130095970
NCBI-ProteinID:
XP_056118549
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MAAVGSAKSTGLGQRGKSRPGAHTAPLSLEEARCPVCSEILLEPVTMPCGHSVCLHCFQR
TVKLISLCCPLCRLRVSSWARTQSREKSLVNAELWELVRLSHPERCKRRMEQRDGEIADG
EIFRAPVPIHKPGEMRQDYEKQKMKSGCSEETEERKKKIHRKEDCGMLKHCQYPFCGVSD
SENEEPVGKRTRHVSAFVRKTRCSPAFNRGCLHSSAVQRSRSCTDSEDGRGKSRVHTHHA
VPDKASITHSYNAGILLSSENSLSFSAPVLSLDKRHHWRGIHTSSVSAVLQTKPERSISP
ESNDSISEELNHFKPIVCSPCTPPKRLPDGRLLEPTIVKSTPRNLTRTLQKSTSYEASPT
ILQKWKQIEVDRQSIKVTSKGTVTSPIAEDPSHKLSPVEERDSRLCSCAVATDGLKDHQC
ICESSAKGSKDHKLVVCNKRRLIFDQCKKEEDTQPVSAHVRSTTQTIADTSSPKRRSRCE
ARCEPTETCAPMLDKHAGHCNQGTVDPENFINEPSTRSCVLNRPTSRRGKKRSHKTKHLE
EKLQAKISRTNSRNACNRLDDPIVRRMNQEKVDRELALKLQRQFDRECQKVDRLKTSRNK
YELRSWATKDGMVGHNTRRSGRISKRNEHLNYSC
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggggtccgccaaatccactggactgggacagagaggcaaaagcaggcca
ggcgctcacaccgctccgctgtctctggaggaggcccggtgtccggtgtgctcggagata
ctcctggagccggtgacgatgccctgcggacactcggtgtgcctgcactgcttccagcgg
acggtgaagctgatcagcctgtgctgtccgctgtgccggctgcgggtgtccagctgggcc
cgcacacagtcccgggagaagagcctggtcaacgccgagctgtgggagctggtccgcctc
agtcacccggagagatgcaagcggaggatggagcagagggacggggagatcgcggacggg
gaaatttttcgtgcgcctgtgccaattcataagcctggagaaatgcgtcaagactacgag
aaacaaaagatgaagagtggatgcagtgaagaaactgaagagagaaagaaaaaaatccat
agaaaagaagactgtgggatgctcaaacattgtcaatatcctttctgtggagtgtcagac
tctgagaatgaagagccagtgggaaagaggaccagacacgtttcagcatttgtacgaaaa
acaagatgctcccctgctttcaatagaggttgtcttcatagcagtgccgttcagaggagc
aggagctgtacggattctgaggatggcagaggaaaaagcagagttcacacacatcatgct
gttcctgacaaggcaagcatcactcatagttacaacgctggaatccttctctcctcggag
aacagtctgtctttttcagccccggtgctgagcctagataagagacaccactggcggggc
atccacacctcttccgtttctgctgtgctacaaacgaaaccagagaggtccattagcccc
gagagcaacgatagcatatcggaagaactcaaccatttcaagcctatcgtctgctcgcca
tgcacgccacccaaaaggttgcccgacgggcgacttttggagcctacgatcgtgaagtcg
acccctaggaacttgacacgcactctgcagaagtccacaagctacgaggccagccccacc
atcttgcagaagtggaagcagattgaagttgatcgccagagcatcaaagtgacctccaaa
ggtacagtcacaagtccgatcgcagaggatcccagccataaactgagtcccgtagaagaa
cgggacagccgactctgcagctgtgctgtagccacggacggcttgaaggatcatcagtgc
atttgtgagtcaagtgccaaagggtctaaggatcataaacttgtagtctgcaataaacgg
cggcttatatttgatcagtgtaagaaagaggaagatacacagccagttagcgctcatgtc
aggtcgacaactcaaactattgcagatacttcatccccaaaaaggcgtagcagatgtgaa
gcacgctgtgaacccacagaaacgtgtgcaccgatgttagataaacacgctggacattgt
aatcagggaactgtagaccctgagaactttataaacgagcctagcaccaggagctgtgta
cttaacagacctacctcaagaaggggtaaaaagagaagccacaaaaccaaacacttggag
gagaaactccaggcaaaaatatctcggaccaatagccgcaatgcctgcaacaggcttgat
gatcctattgtccggcgaatgaatcaggaaaaggtggaccgagaactggcactgaagcta
cagagacagtttgacagagaatgccaaaaagtggacaggctcaaaacaagtcgtaacaaa
tacgaactcaggtcctgggctacgaaagatgggatggtaggacacaatacacgcagatca
ggaagaatctccaaaagaaatgagcacttgaactatagttgttaa
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integrated database retrieval system
