Rhinichthys klamathensis goyatoka (western speckled dace): 130095975
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Entry
130095975 CDS
T09701
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130095975 (rffl)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
130095975 (rffl)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
130095975 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
FYVE_2
SAP
zf-RING_5
Prok-RING_4
FYVE
HeH
zf-RING_2
Ish1
zf-C3HC4_2
SDE2_2C
Motif
Other DBs
NCBI-GeneID:
130095975
NCBI-ProteinID:
XP_056118559
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MWASCCGWLGLDESTVENTGSSTQHQTFTNSGFSSYPSPENTCKACGGRFDSLARKHMCM
DCKKSFCSQCSAQLDVQPWLCHTCQRFRGILYERAELMRLKVKDLREYLHLHGVPTQMCR
EKEELVELVLGQQTPPSDTHIPPPITTRLDPQEDPYTPFNTASLSQDNSTTELGPQAQTT
EDAQSLAEATAESEMDDELQVEQEMQSSDSEEVLAPGRRASLSDLGSADDIEALSVRQLK
EILARNFVDYKGCCEKWELMERVTRLYHDQKDLQNMVSTAIEGTDSGSGTAVEETLCKIC
MDSPIDCVLLECGHMVTCTKCGKRMSECPICRQYVVRAVHVFRS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtgggccagctgctgcggctggcttggtctggatgaatccactgtggagaacaccgga
agtagcacacaacatcagaccttcacaaactcaggcttcagcagttacccatctccagaa
aacacgtgcaaggcctgtggaggtcgctttgacagcctcgccaggaagcacatgtgcatg
gactgcaagaaaagcttctgcagccagtgctccgctcagctggacgtccagccgtggctg
tgccacacctgccagcgtttccgcgggatcttgtacgagcgagctgagctgatgaggctg
aaggtgaaggacctgagggaatatcttcacctgcacggggtccccacacagatgtgccga
gagaaggaggagctggtcgagctggtcctcggccaacagacacctccgtctgacacacac
attcctcccccaataaccacacgcctggacccgcaggaagacccttacactccattcaac
accgcaagcctgtcgcaggacaacagcacaacagaactgggacctcaggctcaaactaca
gaagatgcacagagcttggctgaggcgacagctgaaagtgaaatggacgatgagctgcag
gtggagcaggagatgcagtcttcagactctgaagaagtgttggctcctgggcgacgggcg
tccctctcagacctcggatcagcggatgatattgaggcgttgagtgtccggcagttgaag
gagattctggccaggaactttgtcgactacaaggggtgctgtgagaaatgggaactgatg
gagagagtcacgcgtctctaccacgaccagaaggacctgcagaacatggtgtctaccgcc
atagaaggcacagactctggatctgggacggcggtggaggagaccctgtgtaagatctgt
atggactcgcccatcgactgcgtcctgctggagtgcgggcacatggtcacatgcacaaag
tgcggcaaacgcatgagcgaatgtcccatctgccgacagtatgtggtgcgggcagtgcac
gtgttcagatcctga
DBGET
integrated database retrieval system
