Rhinichthys klamathensis goyatoka (western speckled dace): 130096150
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Entry
130096150 CDS
T09701
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A-like
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130096150
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
130096150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1_subA
Motif
Other DBs
NCBI-GeneID:
130096150
NCBI-ProteinID:
XP_056118794
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MDDVEADGFPQDELTNRELVKSPVNLELWTDDKGVPTEIFFTKSNRKCLKRLRDAMLLHN
WQEAAVYYNSYIQALEARNSIKVHPTASEITWRIGTEILRHLPNATAEDFNAVNEQLKNN
GVKNFSKICLEHCFHLLLNGQMEEAKRQLSVGESWRYGNFSIAQVDTKNLIRAYSGFLDY
LIWCEKKSSTAGTDEASRNHEMHSYFRYASVTLKDIISQPGIWDPFVLGYINMLEFYNDE
DGALQILENYAYNKDFPINPNAHVYLYQFLKRHNAPDDKLIGSLRILHSLVPSHELMLDL
CSLLLSTRLMSDLEEALSVSMDLLEFSSWKSDMKAWSCLLNIIKLLKRKKCKEFLLKEWD
ARRPLWFSFHFRMHFARVDLVENASLLQIKSEVLSGLGERFLEYRRYNAHLKRIPETKTD
ECPYRNVVNKRRKENLEKKKMEMEKKRLEKKKKMKEKLMETEEKDGEKNMKKKAKKSKYT
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgtagaggctgatggttttccacaggatgaattgacaaatcgggaactggtt
aaatcgcccgttaacctcgaattgtggacagatgacaaaggagttcccacagagatcttc
ttcaccaagtcgaacagaaagtgtctgaagcggctcagagatgcgatgctgcttcataac
tggcaggaggctgcggtttattacaactcttacattcaggcactggaggccaggaatagc
attaaagtgcatccaacggcttctgagatcacatggagaataggcacagaaattctgcgt
catctccctaacgccaccgctgaagatttcaacgctgtaaatgaacagttgaaaaacaat
ggagtcaaaaacttctcgaagatctgtttggagcattgctttcatctcctactaaacggg
cagatggaagaagccaagcggcagctgtccgtcggagagagctggagatatggcaacttc
tcgattgctcaggttgacacaaaaaatctcattcgtgcgtacagcggttttctagattac
ttgatctggtgtgagaagaagtcctctacagctggaaccgatgaggcgagccgtaaccat
gagatgcacagctacttcagatatgcttctgtgaccctgaaggacatcatcagtcagcct
ggaatctgggacccttttgtgttgggttacattaatatgctggagttttacaacgatgag
gacggcgctctgcagattctggagaattacgcttacaacaaggatttcccaatcaatccc
aatgctcatgtgtacctgtaccagttcctcaagagacacaatgccccagatgacaaactc
atcggttcattaaggattctgcactctttagtcccgagtcatgaactgatgctggatctc
tgctctctcctgcttagcacccgcctcatgagtgatctagaagaagctctcagcgtttca
atggaccttctggagttttccagttggaaaagtgacatgaaggcttggtcgtgtcttctg
aacattataaagttactcaaacggaaaaagtgcaaggagtttttattgaaggaatgggac
gccaggcgaccactgtggttctcctttcacttcagaatgcatttcgccagggtagacctg
gtggagaacgccagtcttctgcagatcaagagtgaagttttatcgggtctaggtgaacgc
tttttggaatacagaagatacaatgcacacttaaagagaatacctgaaactaaaacggat
gaatgcccgtacaggaacgtggtgaataaaaggaggaaggaaaatctggagaagaaaaag
atggagatggagaagaaaaggttggagaagaagaaaaagatgaaggaaaaattgatggag
acggaagagaaagatggagaaaaaaatatgaaaaagaaggctaagaagtctaaatacact
gtataa
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