Rhinichthys klamathensis goyatoka (western speckled dace): 130096154
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Entry
130096154 CDS
T09701
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A-like
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130096154
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
130096154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1_subA
KATNA1_MIT
Motif
Other DBs
NCBI-GeneID:
130096154
NCBI-ProteinID:
XP_056118798
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MDDVEADGFPQDELTNRELVKSPVNLELWTDDKGVPTEIFFTKSNRKCLKRLRDAMLLHN
WQEAAVYYNSYIQALEARNSIKVHPTASEITWRIGTEILRHLPNATAEDFNAVNEQLKNN
GVKNFSKICLEHCFHLLLNGQMEEAKRQLSVGESWRYGNFSIAQGEAKNLIRAYSGFLDY
LIWCEKKSSTAGTDEASRNHEMHSYFRYASVTLKDIISQPGIWDPFVLGYINMLEFYNDE
DGALQILENYAYNKDFPINPNAHVYLYQFLKRHNAPNDRLIRSLRILHSLVPSHELMLDL
CSLLLSTRLMSDLEEALSVSMDLLEFSSWKCDMKAWSCLLNIMNLLKQKKRKEFVLKEWD
ARRPLWFSFHFRIHFARVDLVENVSLLQIKSEVLKGLGERFLEYRRYAQNLKRKSESKTK
ECALRKSKKRKVKKEKMEKEKKKKR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgtagaggctgatggttttccacaggatgaattgacaaatcgggaactggtt
aaatcgcccgttaacctcgaattgtggacagatgacaaaggagttcccacagagatcttc
ttcaccaagtcgaacagaaagtgtctgaagcggctcagagatgcgatgctgcttcataac
tggcaggaggctgcggtttattacaactcttacattcaggcactggaggccaggaatagc
attaaagtgcatccaacggcttctgagatcacatggagaataggcacagaaattctgcgt
catctccctaacgccaccgctgaagatttcaacgctgtaaatgaacagttgaaaaacaat
ggagtcaaaaacttctcgaagatctgtttggagcattgctttcatctcctactaaacggg
cagatggaagaagccaagcggcagctgtccgtcggagagagctggagatatggcaacttc
tcgattgctcagggtgaggccaaaaatctcatccgtgcgtacagcggtttcctagattac
ttgatctggtgtgagaagaagtcctctacagctggaaccgatgaggcgagccgtaaccat
gagatgcacagctacttcagatatgcttctgtgaccctgaaggacatcatcagtcagcct
ggaatctgggacccttttgtgttgggttacattaatatgctggagttttacaacgatgag
gacggcgctctgcagattctggagaattacgcttacaacaaggatttcccaatcaatccc
aatgctcatgtgtacctgtaccagttcctcaagagacacaatgccccaaatgacagactg
atcaggtcattaaggattctgcactctttagtcccgagtcatgaactgatgctggatctc
tgctctctcctgctgagcacccgcctcatgagtgatctagaagaagctctcagcgtttca
atggaccttctggagttttccagttggaaatgtgacatgaaggcttggtcgtgtcttctg
aacattatgaatttactaaaacagaaaaagcgcaaggagtttgtattgaaggaatgggac
gccaggcgaccgctgtggttctcctttcacttcagaatccatttcgccagggtagacctg
gtggagaacgtcagtcttctgcagatcaagagtgaagttttaaagggtctaggtgaacgc
tttttagaatacagaagatacgctcaaaacttaaagagaaaatctgaaagtaaaacaaag
gaatgcgcattgaggaagagcaagaaaaggaaggtaaagaaggaaaagatggagaaggaa
aaaaagaagaaaagatga
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