Rhinichthys klamathensis goyatoka (western speckled dace): 130096216
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Entry
130096216 CDS
T09701
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130096216
04121 Ubiquitin system [BR:
rkg04121
]
130096216
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130096216
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130096216
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-BED
DUF659
DBD_Tnp_Hermes
RhoGEF
DUF3196
Motif
Other DBs
NCBI-GeneID:
130096216
NCBI-ProteinID:
XP_056118875
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MAEYIGDADEREIIKPPLRSSVWKHFGFCKDGDVLNKSLAVCRICKGQVKYNGNTTNLSS
HLLRRHGISHNTDRPGTSCSVPATAAAAQGKVNSAEASGLACMFSQRLGQNSARAKNITA
TIAKFICKDLRPYSVVENPGFREMILTLEPRYTIPSRPHFSEKVIPALYESTKNDVKLSL
SQAERVAITTDGWTSCSNQGYVTITSHHIDPEWKMKTFVLQTRVLNEAHTGKNIGALLRE
ACMEWEISDKNPAIVTDNARNMIVAGAEAQFSPHITCFAHTLNLTSQKGLEVERVSRLLG
KVRKIVGYFHRSTIACHALQEKQTLMDLPKHKLIQDIITRWNSSFEMLERFLEQQQAIMA
TLMSKDLRKKGVTDVGTLSESDIANMEDIVQLMGPVKMATTVMCEEDQPTLSVIAPLQAK
LLKHLQPCEDDSTLVAEIKRVMANDLSTRYSGTQDALNMGN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatacataggagatgccgacgagcgagaaatcatcaagcctccattgcggtcc
agtgtgtggaaacactttggattttgcaaagacggcgatgttttaaataagtcgctcgct
gtttgtagaatatgcaaaggtcaagtaaagtacaacggcaacacgacaaatctctctagc
cacctactaaggcgccatgggatttcacacaacaccgaccgtccaggcacctcttgcagc
gttcccgctactgcagccgcagcgcaaggtaaagtcaactctgcagaagcctcaggcctc
gcctgcatgtttagtcagagactaggccaaaactcagctcgggcgaaaaacatcacggca
acaattgccaagtttatctgcaaagatttgcgaccgtacagtgtggttgaaaatccgggg
ttccgtgaaatgattctaacattggagccaaggtacacgataccaagccgaccacacttc
tcagaaaaagttattcctgcattgtacgaaagtactaagaatgacgtgaagctgtcgctt
tctcaagctgaacgagtagccataacgacggatggctggacgtcatgctcaaatcaaggg
tatgtgacaattacctctcatcacattgatccggagtggaaaatgaagacctttgttctg
caaaccagagttttaaatgaagcccatactggtaaaaatattggcgcgttactgcgtgaa
gcctgcatggagtgggaaatctcagacaagaatcctgccatcgtcacagataatgccagg
aacatgattgtggccggtgcagaagcccagttcagtccacacattacctgcttcgcacat
acactcaacctcacctcgcagaagggtttggaggtggagcgtgtttccaggttgttgggg
aaggtgcgaaaaattgttggatattttcaccgcagcacgattgcatgtcacgccctacag
gaaaaacaaactctgatggatttaccaaaacataaactgatccaagacataatcaccaga
tggaacagttccttcgaaatgcttgaacgttttttggaacaacagcaagctataatggca
actctgatgtccaaggatctacgaaaaaagggggtcacagatgtaggcacgctgagtgag
agtgatattgccaacatggaagacattgttcagttgatgggtcctgtcaaaatggcaact
actgttatgtgtgaagaagaccagccaactctctctgtaattgctccacttcaagcaaaa
ctgctgaaacaccttcagccatgtgaagacgactcaaccctggttgcagagatcaagagg
gtgatggccaatgacctctccacacgctacagtggcacccaagatgctctcaacatgggt
aattaa
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