KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130096478
Entry
130096478         CDS       T09701                                 
Symbol
cul5b
Name
(RefSeq) cullin-5 isoform X1
  KO
K10612  cullin 5
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    130096478 (cul5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rkg04121]
    130096478 (cul5b)
   03400 DNA repair and recombination proteins [BR:rkg03400]
    130096478 (cul5b)
Ubiquitin system [BR:rkg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     130096478 (cul5b)
DNA repair and recombination proteins [BR:rkg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     130096478 (cul5b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 130096478
NCBI-ProteinID: XP_056118947
LinkDB
Position
Unknown
AA seq 795 aa
MATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQESVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCKLEITLLG
NQGSNKKSSVEDSIVRKLMLDTWNESIFCNIKNRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNTDDKLQIYRENFEKAYLDSTERFYKTQAPSYLQQNGVQNYMKYADGKLRE
EEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKRNETESEYGRSSGT
KGSASSELHLMFSLMDKVPSGIEPMLKDLEDHILNAGLADMVATAETITSDSEKYVEQLL
TLFNRFSKLVKDAFQDDPRFLTARDKAYKAVVNDATIFKLELPLKQKGGGLKTQPESKCP
ELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILD
ISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQSFKEMHKHNKLALPADS
VNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFK
NEVGQYDLEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKR
QVLSYEPVVGSPKDFADGSVFYINQEFSLIKNSKVQKRGKINLIGRLQLTTERMREEENE
GIVQLRILRTQEAIIQIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEQKY
IKRDETDINTFIYMA
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggcgacgtctaatttattgaagaataaaggctccctgcagtttgaagacaaatgggat
ttgatgcggcccattgttttgaagttactccgtcaggagtcagttactaagcagcagtgg
ttcgatttgttctcagacgtccatgcagtgtgtttatgggacgacaaaggcccggcaaaa
attcaccaggcactgaaagaagacatcctagatttcatcaagcaagcacaggcacgagta
ctcagtcaccaggatgacacggctttgcttaaagcctacattgtggagtggaggaagttc
ttcacacagtgtgatattctacctaagcccttctgcaagttagagatcaccctgctgggc
aaccaggggagcaataagaagtccagtgttgaagacagtattgttagaaagcttatgcta
gacacatggaacgagtctatattctgtaatataaagaaccggctccaggacagtgccatg
aaactggtccatgctgagagattaggagaagcgttcgactctcagcttgtcatcggagtg
cgcgagtcatatgtgaatttgtgttccaacactgatgacaagctccagatctatagagag
aattttgagaaggcatatctggattccacagagaggttctacaagacacaagcaccctcc
tatctgcaacagaacggcgttcagaactatatgaaatatgcagatggcaagttaagagaa
gaggagaagcgtgcacttcgatatctggaaaccagacgtgaatgtaactccgtccaggca
ctaatggagtgttgtgtgaatgcgctggtgacgtcgttcaaagagacaatcctggccgaa
tgtccgggaatgatcaagcggaacgagacagagagtgagtacggcaggagctctggcacc
aaaggctcagcaagttcagagctgcacctcatgttctcgctgatggacaaagtgcccagt
gggattgagcctatgctgaaagacctggaggatcatatcttgaatgcaggtctggctgat
atggtggccacagcggagaccattacctcagactctgaaaaatatgtcgagcaactccta
acattgtttaaccgctttagtaaattagttaaggatgcattccaagatgacccacgtttc
ctaacagccagggataaagcatacaaagcagtagtgaatgacgcaacaatatttaaactg
gagctccctctaaaacagaaaggtgggggtctaaaaacacaaccagagtccaaatgtcca
gaactgctggccaactactgtgatatgctccttagaaagactccactgagcaagaaactc
acatcagaggaaatagaggccaagctgaaggaagtgctcttggttctaaagtatgttcag
aacaaagatgtcttcatgaggtaccacaaagcgcacttgactcgcaggcttattcttgac
atttctgcggacagtgagattgaagagaacatggtggagtggctcagggaggttggtatg
ccagcagattacgtgaacaagctcgccagaatgttccaggacatcaaagtatcagaagac
ttaaatcaatccttcaaagaaatgcataaacacaacaaacttgcattaccagctgactct
gtcaatataaagatcttgaatgcgggagcatggtctcggagttcagagaaagtgttcgta
tcgttgcccaccgagctagaagatctcattcctgaagtcgaggagttttacaagaaaaat
cacagtggcagaaaattacactggcaccatctgatgtccaatggcattatcacattcaag
aatgaagttgggcagtatgatttagaagttacgacattccagttagctgtgctgtttgcc
tggaaccaaaggccaagagagaggatcagctttgagaatctgaaattagccacggaactt
ccagacgctgagctgcgccggaccctctggtctcttgtagctttccccaaactaaagcgt
caggtcctgtcatatgaacctgtggtgggctctcctaaagacttcgcagacggctctgta
ttttacatcaatcaagagttttctttaataaaaaactcaaaggtccagaaaagagggaag
atcaatttgattggtcgattacaactcaccacagagagaatgcgtgaagaagaaaatgag
ggcatagtgcaacttcggatactacgcacacaggaagctatcattcagattatgaagatg
aggaagaggatcagcaatgcccagcttcagacggagctggtggagatcctaaagaacatg
tttcttccccagaaaaagatgatcaaagagcagatcgagtggctgatagaacagaagtac
atcaaacgggacgagacggacattaacacgtttatctacatggcgtag

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