Rhinichthys klamathensis goyatoka (western speckled dace): 130096525
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Entry
130096525 CDS
T09701
Symbol
cadm1a
Name
(RefSeq) cell adhesion molecule 1a isoform X1
KO
K06781
cell adhesion molecule 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130096525 (cadm1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130096525 (cadm1a)
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
Nectin family
130096525 (cadm1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_5
C2-set_3
C1-set
DUF6941
DUF4307
Motif
Other DBs
NCBI-GeneID:
130096525
NCBI-ProteinID:
XP_056119033
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MKQVSNMANTSNGSLATLLILFTISAAIHTGAAQFPVQSQNLIADNISVVEGETATISCR
VKNNDDSVIQLLNPNRQTIYFKDVRPLKDARFQLVNFSDNELRVSLSNVSLSDEGRYVCQ
LYTDPPQEAYADITVLIPPGNPIIESREDIVSEGNETEITCTSMGSKPAAAIRWMKGDKE
LQGKSKVETTYDRMFTVTSWLRFTVTREDDGVPVVCIVDHPAVKDFQAQKYLEVQYKPEV
KIVVEFPSGPIREGENLELTCQAKGKPEPQQVNWVRVEDDVPSHAVITGSDLFIENLNKS
YNGTYRCVASNSVGEAYDDYILFVRDALTTTPKPTTTTTTTTISATTSPPDIIQDAAPST
EAAAHDSQAGTEAQRSLDHAVIGGVVAVVVFAMLCLLIVLGRYFARHKGTYFTHEAKGAD
DAADADTAIINAEGGHNNSDEKKEYYI
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggtgtccaacatggcgaacacgagcaacggatctctcgctactctcctcatt
ttattcaccatttcggcagctatccatacaggagctgctcagttcccagtccaaagccag
aatctcatagcggacaacatctcggtagtggagggggagacagccaccataagctgtcga
gtcaaaaacaatgacgactcggtcattcagctcctcaaccccaacagacagaccatatac
ttcaaagatgtcagacccctgaaagatgctcgattccagctggtcaatttctcagacaac
gagctgcgtgtgtcgttatccaacgtgtctctctcagacgagggcagatacgtgtgccag
ctctatacagaccccccacaggaagcctacgccgacatcactgtgctaatcccaccagga
aacccaatcatagagtcccgtgaggacatcgtcagcgagggcaacgagacggagataacc
tgcacctccatgggcagcaaacccgctgcagcgatcagatggatgaaaggagacaaagag
ctacagggcaagtctaaagtggagaccacgtatgacaggatgttcactgtgacgagctgg
ctgaggtttacggtcacgagagaggatgacggggttcctgtggtttgcattgtcgaccat
ccagcggtcaaggacttccaggcgcagaagtacctagaagtacaatataaacctgaggta
aagatcgtggtggagtttccttcgggcccgattagagagggtgaaaatctggaactgacg
tgccaggctaagggcaaaccagagcctcaacaggtgaattgggtgagggtcgaggatgac
gtgccatctcacgcagttatcaccggctcagatctcttcatcgagaacctaaacaagtcc
tacaatggcacttaccgatgtgtggcgtccaactctgtcggtgaagcctatgatgactac
atcctttttgtgcgcgatgcccttaccacaacccctaaacccacaaccaccaccaccacc
accaccatctccgccacaacctcccctccagacatcatacaagacgctgcgcccagcact
gaagccgcagctcacgattcacaagcaggaacagaagcacagagatcgttggaccatgcg
gttattggaggcgtggtggccgtcgtggtcttcgccatgttgtgtcttctcatcgttttg
ggacgatactttgcaagacacaaaggcacctacttcacacacgaagccaagggggcagat
gacgcggcggacgctgacacggccatcatcaacgccgaagggggccacaacaactcggac
gagaagaaggaatactatatctga
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