Rhinichthys klamathensis goyatoka (western speckled dace): 130096581
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Entry
130096581 CDS
T09701
Symbol
cpdp
Name
(RefSeq) CPD photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130096581 (cpdp)
Enzymes [BR:
rkg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
130096581 (cpdp)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
130096581 (cpdp)
Prokaryotic type
130096581 (cpdp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
130096581
NCBI-ProteinID:
XP_056119108
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MSANKRSLKRQRETASAGRESGGKQPKPAGERGRESGWLLEEVSELRRAAQGCEFNKKRL
RYLSSTQKIKQGSDGVLYWMSRDQRVQDNWALIYAQQLALAEKLPLHICFCLVPRFLDAA
YRQYAFMLKGLQEVAKECKSLDIQFHLLSGEPGQNLPTFVKNCNFGAVVTDFNPLRIPLQ
WIETVKKHLPSDIAFIQVDAHNVVPCWEASEKLEYGARTIRGKITKLLPEFLTEIPLVDT
HPHAASQTAKPTDWEEVLSSLEVDRGVGEVDWAQPGTSAGMAMLESFIDQRLRFFATHRN
NPNCDALSHLSPWLHTGQLSAQRIVRQVKREKNASESVASFTEELVVRRELADNFCFYNH
NYDDISGAYDWAKKTLQEHSKDSRQYLYTKQQLENGKTHDQLWNAAQRQLVSEGKMHGFL
RMYWAKKILEWTASPEEALSIAIYLNDRLSLDGCDPNGYVGCMWSICGIHDQGWAERPIF
GKIRFMNYAGCKRKFDVAQFERKYAAIKEISKKDTKTSV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaacaagcgcagcctgaagcgccagagagagaccgcgagcgccgggagagag
tccggtgggaaacagccgaagcccgcaggagagagagggagagagtccggctggctgctg
gaggaagtgtctgagctccgcagagccgcgcaggggtgcgagttcaacaaaaagcgcctc
cgctacctatcaagcacccagaaaatcaaacagggctccgatggggtcctctactggatg
tctcgcgaccaaagagtccaagataactgggcactgatctatgctcagcagctggccttg
gctgagaaacttcctctgcacatctgcttctgcttggtacctcgatttttggatgcagct
tacagacagtacgcctttatgctaaaaggactgcaagaagtggcaaaggaatgcaaaagc
ctggatattcagttccatctgctgtcaggggaacctgggcaaaatctgccaacctttgtt
aaaaactgtaactttggagccgttgtcactgactttaaccctctcaggatccccctccag
tggattgagactgttaagaaacaccttccgtccgacatcgctttcattcaggtcgatgca
cataatgtggtgccgtgctgggaagcatctgagaagctggaatatggagccaggacaata
cggggcaaaatcactaaacttctcccagaattcctcactgagattccgcttgtggacacg
catccacacgccgcttctcaaacagcaaagccgacagactgggaggaggtgctgtcgtct
cttgaggtggaccgtggtgttggcgaggtggactgggctcagcctggcacctctgctggc
atggccatgctggagtccttcattgatcaacgcctgcgtttctttgccacccacaggaac
aatcccaactgtgacgccctcagccatctctccccctggctccacaccggtcagctgtct
gctcagcgtatcgtgaggcaggtcaagcgagaaaagaacgccagcgagtccgtggcgtct
tttaccgaggaactggtggtgcgcagggagctcgccgacaacttctgcttctacaaccac
aactacgatgatatttcaggtgcgtacgattgggcgaagaagactttgcaggagcactct
aaggacagcagacagtacctttacacaaaacagcagctggagaacggcaagacccacgat
cagctgtggaacgccgctcagcgtcagctggtgtcagaagggaagatgcatgggttcctg
cgcatgtactgggcaaagaagatcctggaatggactgcgtcccctgaagaagccctctct
atcgctatatatctgaatgaccgtttatctttggacggctgcgatcccaatggatacgtg
ggatgcatgtggtccatctgtggcatccatgaccagggctgggcagagaggcccatcttt
gggaaaattcgctttatgaattatgctggctgcaagaggaagtttgatgtggcgcagttc
gagaggaagtacgctgctataaaggagatctccaaaaaagacaccaagacatccgtgtaa
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