Rhinichthys klamathensis goyatoka (western speckled dace): 130096585
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Entry
130096585 CDS
T09701
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rkg03037
]
130096585 (ttc28)
Cilium and associated proteins [BR:
rkg03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
130096585 (ttc28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TTC28_C
TPR_MalT
CFAP70_TPR_C
RPN7
TPR_SusR
TPR_16
DUF6340
TPR_6
TPR_NPHP3
TPR_14
TPR_9
TPR_19
PUB
TPR_YpiA_C
Motif
Other DBs
NCBI-GeneID:
130096585
NCBI-ProteinID:
XP_056119109
LinkDB
All DBs
Position
Unknown
AA seq
2354 aa
AA seq
DB search
MMKWQPRKKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRES
LEPTYQQLQKMKLDKSPFVVVSVIGQELLTGSHHGASVVVLEAALKIGTCSLKLRGSVFS
ALSSAYWSLGNTEKSTAYMQQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALSNHR
HQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELG
NMGAVYIAMGDFENAVQCHEQHLSIAKSLGNKREEARAYSNLGSAYHYRRNFDKAMSYHT
HVLELAQELEEKSIEMRAYAGLGHAARCMQDLERAKKYHEQQLSIAEGLKDRAAEGRASS
NLGIIHQMKGDYETALKLHKVHLSIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHR
QELQISMEVNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALG
NLGNFHCSRGEFPQAVPYYEQYLRLSPDLQDMESEGKVCHNLGYAHYCLGNFQEAVKYYE
QDLALAKDLHDKLSQAKAYCNLGLAFKALGDYSKAEECQKYLLSLAQSLNNSQARFRALG
NLGDIFLCKKDVPGAVKFYEQQLSLAHQVKDRKMEANAYAALGAAYRMLQKFDKSLGYHT
QELEVYQEQGDIQGECQAHGHLAAVYMSLGKYTMAFKCYEEQLELGQRLKDPSVEAQVYG
NMGITKMNMGVMEEAIGYFEQQLAMLQQLSGNEAVLDRGRAYGNLGDCYDSLGDFEEAIK
YYDQYLSVAQSLSHMLDQEKAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQ
AYGELGSLHSQLGNYEQAISCLERQLAIARDTQDRLLEGDASCGLGAVYQLMGEHDTALQ
FHQLDLQIAEETGSSSCQARAYGNLGLTYESLGNFERAVVYQEQHLSVAAQTNDLVAKTL
AYSSLGRTHHALQNYSQSVMYLQEGLRLAEQLGRREDEAKIRHRLGLSLWASGNLEESQH
QLYRASALFETIRHEAQHSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTR
AFADLLVERQTGQQDSDPYTPVTVEHILDTVNGQRALVLYFSLAAGYLYSWLLAPGSGIL
KFHEVYLGEGASEDFQEAGGGVMPSSLEQHIANAREALGVDSYYSRACSSSETESEAGDL
LDQQFEELNNKLNSVTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTVSPVKEGTSPLPRRA
SALSKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEY
LYERFSLIAVPSIGSLGTTAKVHPRRTGPVLCNGGSSMAAVVGNPRLPPSVMDRWLWGPM
PSAEEEAHMVADQLGCQPLAGPAATKERVMSALTQAECAHFATHISWKLAALVLTPCQDT
SSGPSATGASGGGGGGAGESAVKSNYTIPESLRVPDDASDAESICDSPPLQEFLLTAADI
LDLRLPTKLVVLGSYQESDSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVAASKMFIHS
FYSALLNGTKASAALADAMKTVQSSKQFSHPSNWAGFMLIGCDVKLNSPSSLIGQALAEI
LQYPDKARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVCGVPGWQALLTAVGFR
LDSAGTGLPAAVFFPTTDPGDRLQQCSTTLQSLLGLPPPALQALCKLITASETGEQLINR
AVKNVVGMLHQVLVQLQSGEKEQDFSLAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQ
EEVVLKTGKQANRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSHQLPMG
FPNPPFSPPCPDSLASDAISVYSLSSIASSMSFLSRPEGASEFISQRSRQQELERHRGGA
GIFASHRHTAVPRSRSSPHGAVGGHEDEEYEGYSIISSEPLGSQCDTLPRPANHRNHRGA
ARGGAGRGYAVSVSSRGSVSTPTSPVKTTLVPSPNSPFQKVGKVSSSDTGESDQSSTETD
STVKSQEERTSGAPLDPQELAQKILEETQSHMRAVETLQRSVPLGDGMSSGGPPTPTGGS
AFRSSETSAFSRPSSRASIKAQSSPLPTRPKPPSRTSSLQKISSGYNSPATSETSLKEGS
QPSPTSEQFKLKYPSSPYSGHISRSPSNVSPSSGHQSPAGSAPSPALSYSSTGSTRSSPA
DAPDIDRLKLAAIDEKVQAIHNLKTFWANATQQQHSGPMRVLRGGKLSTAKRDVLGLLNL
SPRHGVTGQDSPGQDVALEHRNPPNGHRKIDPKRVAPSPTASTGSSPGSHSIRLPTGNGY
KFLSPGRFFPSSKC
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaatggcagccccggaagaaggcatacttccgacagggtgttgcccttcagtac
ctgggccgccatgcggacgccctggctgccttcgcctcgggactggcccaggaccccaag
agcctgcagctgctggtgggaatggtggaggccgccatgaagtccccgctgagagaatcc
ctggagcccacgtaccagcagctgcagaagatgaagctggacaagagcccgtttgtggtg
gtgtcagtgatcgggcaagagcttctgaccggctctcatcacggggcctcagtggtggtt
ctggaggcggcgctgaagatcgggacctgcagcctcaagctgcgcggctccgtgttctcg
gccctcagcagcgcgtactggtccctgggcaacacggagaagagcaccgcgtacatgcag
caggacctggaggtggccaaaactttaggtgaccagacgggcgaatgtcgcgctcacgga
aacctggggtcggccttcttctccaaggggaattaccgtgaggccttgagcaaccacaga
caccagctcgtcctggccatgaagctcaaggacagagaggcggcgtcttcagccctcagc
agtttgggtcacgtctacacggccatcggcgactatcccaatgccctggcgagccacaag
cagtgtgtcctgctggccaaacagtccaaggaccagctgtccgaggcccgtgagctgggc
aacatgggggccgtgtacatcgccatgggtgacttcgagaacgccgtgcagtgccacgaa
cagcacctgagcatcgccaagagcctcggaaacaagcgcgaggaggcgcgcgcctacagc
aacctgggcagcgcttaccactaccggcgtaacttcgacaaggccatgtcctaccacaca
cacgtgctggagctcgctcaggagctggaggagaagagcatcgagatgagggcgtacgcg
ggcctgggacacgctgcccgatgcatgcaggacctggagcgagccaagaagtaccacgag
cagcagctcagcatcgctgaaggcctgaaggaccgcgccgctgagggcagggcttcgtcc
aatctgggaatcatccaccagatgaaaggggactacgagactgctctgaagctgcataag
gttcatctatccatcgctcaggagctaaatgactacgccgcccagggcagagcgtacgga
aacatgggaaacgcttacaacgccctcggtgcctttgaccaggccgtacgctaccaccga
caagagctgcagatttccatggaggttaatgatcgtgcatcgcaggcatcgacacacggg
aacctggcggtggcgtaccaggctttaggggctcacgatcgagctttgcaacattaccag
aatcatctgaacatcgcacgagagttaagggacatccagagcgaagctcgggccttgggc
aacctgggaaatttccactgctcacggggagagtttccccaagccgtaccttactacgaa
caatacctacggctttccccggacttgcaggatatggagagcgagggtaaggtctgtcac
aacttgggatacgcgcactactgtctgggcaacttccaggaggcggtgaagtattacgaa
caagacctggcccttgctaaggacctccacgacaagctaagtcaagccaaagcctactgc
aatcttggcctggctttcaaagcgcttggtgactatagcaaggcagaggagtgccagaag
taccttctctccttggcgcagtcgctgaacaactcgcaagctcgatttcgcgccttgggc
aacctgggcgacatcttcctttgtaagaaggacgttcccggagccgtcaagttttacgag
cagcagttgtccttggcgcatcaggtcaaggatcgcaagatggaagcgaacgcctacgca
gcgctgggagccgcctatcggatgctacagaagtttgacaagtccttaggctatcacacc
caggagctggaggtgtatcaagagcagggagacatccagggagagtgccaggctcacgga
cacctcgccgctgtctacatgtctcttggaaagtacaccatggccttcaaatgctacgag
gaacagcttgagcttggccagcgattgaaggaccccagcgttgaggcccaggtctatggt
aacatgggcatcacaaaaatgaacatgggagtaatggaggaggccattggctacttcgag
caacagttggcgatgttgcagcagctcagtggcaacgaggccgtgctggaccgtggtcgc
gcttatgggaacttgggagactgctatgactcgctgggagattttgaagaggcaattaag
tattacgaccagtatctctccgttgcacaaagcctcagccacatgctggaccaggagaag
gcatacagaggtcttggtaatggacacagggcgatggggaacctccagcagtctctggtg
tgttttgagaagcggctggttgtggctcatgagctgggagagtgtggaggaaaggctcag
gcgtatggagagctgggcagtttgcacagccagctggggaactacgagcaagccatctca
tgcctggagcggcagctcgccatcgcccgcgacacacaggaccggctgctggagggggac
gccagctgtgggctgggcgctgtgtaccagctgatgggtgagcacgacacggctctgcag
tttcaccagctggacctgcagatcgcagaggagaccggcagctccagctgtcaggcccgg
gcctacgggaacctgggactcacctacgagtctctgggtaatttcgagcgtgccgtggtg
tatcaggaacagcatctgagcgtcgccgctcagaccaacgacctggtggccaaaactctg
gcctacagcagcctgggacgcacacaccacgctctgcagaactactcgcagtccgtcatg
tacctgcaggaaggtctgcgtctggcggagcagctgggccgtcgagaggacgaggccaag
attcgacaccgtctggggctctcgctgtgggccagtggcaatctggaggaatcccagcac
cagctgtaccgtgcgtcggctctgtttgagaccattcgtcatgaagcccagcacagcacc
gactacaagctctcgctgttcgacctgcagacctcctcgtaccaggctctccagagggtc
cttgtcagccttgggcatcatgatgaagctctggccgtggcggagcgcggacgcactcgg
gctttcgccgatctgctggtggagagacagacgggccagcaggactcggacccgtacaca
cccgtgacggtcgagcacattctggacacagtgaacgggcagcgggccctggtgctctac
ttctccctggcggcggggtacctgtacagctggctcctggccccggggtccggtatcctg
aagtttcacgaggtgtatctgggtgagggcgcgtcggaggacttccaggaggccggtggt
ggcgtcatgccctcgtctctggagcaacacatcgctaatgcccgtgaagctctgggtgtg
gactcctactacagcagagcgtgttccagcagcgagactgagagcgaagctggagacctt
ctggaccagcagtttgaagaactcaacaataaactcaactcagtgaccgacccgaccggc
ttcctgaggatggtttccagaaacaacctcttcaacaggagttgtcagagtatgacgagt
ctcttcagtaacaccgtgtctccggtgaaggaaggcacatcgcctctgccccggcgcgcc
agtgcgctcagcaaacccccgttacgagcgctctacgacctgctcatcgccccgatggag
gggggcctgatgcactccagcggtcccgtcggcagacaccggcagctggttctggttctg
gagggcgagctgtacctcatcccgttcgctcttctgaagggaagctcatctaatgagtat
ctgtatgagcgcttcagtctcatcgctgtaccgtccatcggcagtctgggaaccactgct
aaagttcaccctcggcggacgggtcctgtcctgtgtaatggaggaagctcgatggctgca
gtggtggggaaccctcgcctgcccccgtcagtgatggaccgctggctgtggggtccgatg
cccagcgctgaggaggaggctcacatggtggccgatcagctgggctgccaaccgctggcc
ggtcccgccgccaccaaggagcgggtcatgagcgccctcacccaggccgagtgcgcacac
ttcgccacgcacatctcctggaagctggcggccctggtcctcacgccatgccaggacaca
agctctggaccgtcagcgacgggggcttctggaggaggaggaggaggagctggagagagc
gcggtgaagtccaactacaccatcccggagagcctgcgtgtgccagacgacgccagcgat
gccgaaagcatctgtgacagtcctccactgcaggagttcctgctcaccgcggccgatatc
ctcgatctcaggctgccgaccaaactagtggtgctcggctcgtaccaggagtcggacagt
aaagtgaccgctgacggggtggtgggactgacgcgggcgttcctggccgctggagcgcag
tgtgtgctggtgtctctgtggccggttcccgtcgccgcctccaagatgttcatccactcg
ttctacagcgctctcctcaacggcaccaaagccagcgcggccctcgcagacgccatgaag
accgtccagagcagcaaacagttctcgcacccctccaactgggccggcttcatgctgatt
ggctgtgacgtgaaactgaacagcccgtcatctctgattggtcaggctctggctgagatc
ctgcagtatccggacaaagccagagatgccctgagggtcctgcttcacctggtggagaag
tctctccagcgcatccagaacggccagaggaactccatgtacacgtctcagcagagcgtt
gagaataaggtgtgtggcgtcccgggctggcaggctcttctgacggcggtgggcttcaga
ctggactcggctggaacgggactccccgctgccgtcttcttccccaccactgaccctgga
gaccgccttcagcagtgcagcaccacactgcagtccctgctgggtttgcctcctccagct
ctgcaggcgttgtgtaaactgatcacggcgtcagaaaccggagaacagctcatcaaccgg
gctgttaaaaatgtagtgggaatgctccatcaggttttggtgcagcttcagtctggagag
aaggagcaggatttctctctcgcacccattcaggtgtccatcagtgtgcagctctggaga
ctccccggctgtcacgagttcctggccgctttggggtttgacctgtgtgaggtgggtcag
gaggaggtggtgttgaagactggtaaacaggccaaccgtcgcaccatgcactttgccctg
cagtcactgctggcgctgtttgactcaaccgagcttccgaagcgtctgagtctggacagt
tcctcatctctggagtcgctggcctcggcacagtccgtgtcccaccagctgcccatgggc
ttccccaaccctcccttctcccccccgtgccccgacagcctggcatcggacgccatctcc
gtctacagcctgagctccatcgcctcctccatgagctttctgtcccgtcccgagggagcg
tccgagtttattagccagcgctcgcgacaacaggaactagagcggcatcggggcggagct
gggattttcgcgtcccacaggcacacggcagtgccacgcagtcgctcgtccccacatgga
gccgtaggaggacatgaagacgaagaatatgagggatacagtataatcagcagtgagccg
ttgggaagccaatgcgatacgcttcctcgtcccgcgaaccacaggaaccatcggggcgcg
gcgcgcggcggagccggcaggggttacgcggtatccgtgtcctccaggggaagcgtaagc
accccgacatctcctgtcaaaaccacccttgttcccagtcccaactccccgttccagaag
gtcgggaaggtgagcagctccgacacgggcgagtccgatcagtcgagcacggagacggac
agcactgtgaaatcccaagaggagcgtacgtccggagcgcctttggatccgcaggaactc
gcgcagaaaatcctcgaagagacgcaaagccacatgcgggccgtcgagactttgcagaga
agcgtcccgctgggtgacgggatgagcagcggaggtcctccgactccaaccggaggctct
gctttccgttcctcggagacgagcgcgttcagtcggcctagcagcagagctagcatcaag
gctcaatcgtctccgctcccgacccgccccaaaccgccttcccgtacctcctcccttcag
aagatcagctcgggatacaacagccctgccacttcagaaacgtccctgaaggaaggcagt
caaccctcgcctacttccgagcagtttaaactcaagtatcccagctcgccgtatagcgga
cacatctctcgctcgcccagtaatgtctcgcccagctcgggacaccagtcgcccgccggg
agcgctccctctccggcgctgtcctactcctcgacgggttcgactcgctccagtccggcg
gacgccccggatattgaccgactcaaactcgccgctattgacgagaaagtccaagcgatc
cacaatctcaagaccttctgggccaacgcgacccaacagcagcactcgggaccgatgcgg
gtgctccgcggcgggaaactgagcaccgcaaaacgagatgtcctgggtcttttaaacctc
tcgcctcggcatggagtgacgggtcaggattcgcccggtcaggatgtggcgctcgaacac
agaaatccaccaaatggccatcgcaaaatcgatccgaagagagtcgcaccttctccgacg
gcttccaccggttccagtcccggttcgcattcaatccgactgcctacggggaacgggtac
aagttcctctcgccgggacggttcttcccttcgtctaaatgttga
DBGET
integrated database retrieval system
