Rhinichthys klamathensis goyatoka (western speckled dace): 130096790
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Entry
130096790 CDS
T09701
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130096790 (vps53)
Membrane trafficking [BR:
rkg04131
]
Protein recycling
Others
EARP complex
130096790 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
130096790 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
GrpE
Laminin_II
Sec8_N
hAT-like_RNase-H
COG3_N
Tropomyosin
O_Spanin_T7
FUSC
Med11
ING
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
130096790
NCBI-ProteinID:
XP_056119439
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MMEDEELEFVEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNNIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFEETFPAQGSKKSGGPSIVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWWMTERIAVEFCHITRIELAKLMRTRAREIEVKLLLFAIQRTTNFEGLLAK
RFSGCTLNDGPGQKKPETPLEPTNPFLEDESGEDNVSEKEEDLDRPKKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKSGTDEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALSTIFQKYLREYAWKILSGNLPKTSTNSGGLTISSLLKEKEGSEA
AKFTMEELCLICSILSTAEYCLATTQQLEEKLKEKVDKSLMERINLTGEMDTFSTVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLADSNPETFQKILDMKGLKRS
EQSTMLELFRQRLPTPPSGPDGGPSLSFSAPTPEQESSRIRKLEKLIKKRIQ
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggatgaagaattagagtttgtggaagatttggaggcgatattacaccttact
ccagaagtgcagctggccattgagcaggttttccccagccaagaccctttggatcgagct
gacttcaatgctgttgaatacattaataccttgtttccaacagagcagtcattggcgaac
atagacgatgtggtgaataacatacgacttaaaatcagacggttggatgacaacatcagg
acagtggtgaggggacagactaatgtgggacaagatggcagacaggcattggaggaggcc
cagaaagccatccagcaactctttggcaaaatcaaagacatcaaagacaaagcggagaaa
tcggagcaaatggtgaaagagatcacacgggacatcaagcagttggaccatgcaaagcgt
cacctgacgacttctataaccaccctcaatcacctgcacatgctggctggcggtgtggac
tctcttgaagctatgactcgaaagaggcagtatggggaggtggccaatctccttcagggt
gtagtcaacgtgcttgagcacttccagaagtacatgggcatcccccagatacgccagctc
tcagagagagttaaagccgcacagagcgagcttggtacacagatattggctgacttcgag
gagacttttcctgctcaggggtcaaagaaatctggtggtcctagcattgttctcagagat
gcctgcttggtagcgaatgtcctggatcctcggattaagcaggagatcatcaaaaagttc
atcaggcagcacctgtcagaatacctcgttctcttccaagagaaccaggatgtggcatgg
ctcgacaaaatagaccggcgctatgcgtggatcaagcgtcagctcgtggactatgaagag
aagtatggacgaatgttccctgaggagtggtggatgaccgagcgcatcgctgtagagttc
tgtcatatcaccagaatcgagctagccaagctgatgcgaacccgtgccagggagatcgag
gtcaagcttttgctcttcgctattcagaggaccaccaatttcgagggactgctggctaag
cgcttctcgggctgcaccttgaacgacgggcccgggcagaaaaaacctgagacgcctcta
gagccaacaaacccctttctggaagacgagtcaggagaggacaacgtatcagaaaaggag
gaagatctggatagaccaaagaagcccaaggctccagacaaccccttccacggcattgtg
tccaagtgctttgagcctcatctctacgtttacatcgagtcgcaggataaaaatctcgga
gagctgatcgaccgttttgttgctgatttccgggcacagggtccccctaaatcaggtaca
gatgagggaggtgctgtgcttcccagctgtgcagatctctttgtgtactacaagaagtgt
atggtgcaatgctcgcaactgagcaccggagaacccatgattgctctgagcaccatcttc
cagaagtatctgcgcgagtatgcctggaagatcctctctggaaacctacccaagaccagc
accaatagtggtggtctgaccatcagcagcctgctgaaggagaaagagggatcagaagcg
gccaagttcaccatggaagagctgtgtctcatttgcagcatcctaagcacagccgaatac
tgcctggctaccacacagcagctggaggagaagcttaaggaaaaggtggacaagtcattg
atggagagaatcaacttaactggggagatggacacctttagcacggttatctcaaacagt
attcagctcttggttcaggaccttgatgctgcatgtgatccagcccttacagctatgagc
aagatgccgtggcagagtgtggagcatgtgggagaccaaagcccgtacgtgacctctgta
atcatgcacatcaaacaaaatgtgcccatcattagagacaacctggcctccacccggaaa
tacttcacgcagttctgcattaagttcaccaactccttcattccaaagttcatcaaccac
ctattcaggtgtaagccaatcagcatggttggagcagaacagctactcctggacacacat
tccctcaagaccgttcttctagacctcccttccattggctctcaggtggtccgtaaagcc
ccggccagctacaccaaaatagtggttaaaggaatgactcgagcggagatgatcctcaag
gtggtcatggcccctcacgaaccgtccgtggtctttgtggacaactacatcaagctcctt
gctgacagcaaccctgagactttccagaagatactagatatgaagggtctgaaacggagt
gagcagagcaccatgctggagcttttcagacagaggttgcccactccgccctcaggacca
gacggtggcccatcattgtccttcagtgcccccacccctgaacaagaatcttcccgtatc
cgcaaactggaaaagctcattaaaaagagaattcagtaa
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