Rhinichthys klamathensis goyatoka (western speckled dace): 130096837
Help
Entry
130096837 CDS
T09701
Symbol
atg4a
Name
(RefSeq) cysteine protease ATG4A
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04136
Autophagy - other
rkg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130096837 (atg4a)
04136 Autophagy - other
130096837 (atg4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130096837 (atg4a)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130096837 (atg4a)
03029 Mitochondrial biogenesis [BR:
rkg03029
]
130096837 (atg4a)
Peptidases and inhibitors [BR:
rkg01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
130096837 (atg4a)
Membrane trafficking [BR:
rkg04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
130096837 (atg4a)
Mitochondrial biogenesis [BR:
rkg03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130096837 (atg4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
130096837
NCBI-ProteinID:
XP_056119503
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MEAVLAKYENQFSEYLEELPDADEPVWILGECYNAKTQKSELLSDVRSRLWFTYRKKFSP
IGGTGPSSDAGWGCMLRCGQMILAQALICRHLGRDWRWDPEKHQPKEYHRILSCFLDKKD
SCYSIHQMAQMGVGEGKSVGEWYGPNTVAQVLKKLALFDDWNTLAVYVSMDNTVVIEDIK
KQCQQPGRGFRPRPGPCDREEECVSGRSASEALHVHTQRPLDWRPLLLVIPLRMGINCIN
PVYIQAFKECFKMPQSCGVLGGKPNLAFYFIGFIDDELIYLDPHTTQQAVDPESGSAVDD
QSYHCQRTPHRMKITSLDPSVALGFFCKSEEDFDSWCDLVQQELLKKRNLRMFELVEKHP
SHWPPFVPPTKPEVQTTGAEFIESPDKLFESEEEFEILNV
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagttctagccaagtatgagaatcagttttccgagtatctagaagagcttcct
gatgcagacgagccagtgtggatcctgggagaatgttataatgctaaaacacagaaatca
gagctgctctcggatgtgcgatcgcgactgtggttcacatacaggaaaaagttttctcca
ataggaggaacaggcccttcgtcagatgcggggtgggggtgcatgctccgctgtggacag
atgatcctggcgcaggcgttgatctgcagacacctgggacgagactggcggtgggaccca
gagaaacatcagcccaaagagtatcatcgtatcctgagctgctttctagacaagaaggac
agctgctactcgatccatcagatggctcagatgggcgttggcgagggcaagtctgtggga
gaatggtatggaccgaacacagtggcgcaagtactcaagaaactggccctgtttgatgac
tggaatactctggctgtgtacgtgtcgatggacaacacagtcgtgattgaagacatcaag
aagcagtgccagcagccgggccgggggttcaggcccaggcccggtccctgtgatcgggaa
gaggagtgtgtgtcgggccggagcgcttcagaggctcttcatgttcacacacaacggccc
ctggactggaggcccctgctcctggtcattcctctgcgaatgggcatcaactgcatcaac
cccgtctacattcaggccttcaaagagtgtttcaagatgcctcagtcatgtggtgtttta
ggaggaaagcccaacctggccttttattttattggatttattgatgacgagttgatctat
ctggaccctcacactacgcagcaggccgtggaccctgagtcaggcagtgctgtggacgac
cagagctaccactgtcagaggacccctcaccgcatgaagatcaccagcctggacccttcg
gttgcactgggtttcttctgcaagagcgaggaggacttcgacagctggtgtgatctggtt
cagcaggagctcctcaagaaaagaaacttgcgcatgttcgagctggtggagaaacatccc
tctcattggcctccgtttgttcctcccaccaaaccagaggtgcagaccacaggagcagag
ttcatcgagtctccagacaagctttttgagtcggaagaggagtttgagatcctaaacgtg
tga
DBGET
integrated database retrieval system
