Rhinichthys klamathensis goyatoka (western speckled dace): 130096841
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Entry
130096841 CDS
T09701
Symbol
pdlim4
Name
(RefSeq) PDZ and LIM domain protein 4
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130096841 (pdlim4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130096841 (pdlim4)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
130096841 (pdlim4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
SNAPC3
Motif
Other DBs
NCBI-GeneID:
130096841
NCBI-ProteinID:
XP_056119506
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MSHTVTLAGPSPWGFRLVGGRDFSTPLTISRITPASKAALSDLCPGDTILTINGESTETM
THMEAQNRIKACTDQLVLAISRSGKVWSPTGIEETKTSPYTGILESESQTFRPISSGYSP
TPKSPSPKSPITGGVSHNNGNSRPTYNSPAGLYSHNNGNGALPKQMAGLSLGSPHSFSPE
PPMNSSGNRNGFDPQSDVYRMLQDPEEPVSAPKQSGSFKYLQGILEAEDGGVSPVDRHGV
RGLRSPVKSPVPKLGSPITAPLAPMAGLQKLPQCTRCGNGIVGTIVKARDKLYHPDCFMC
DDCGLNLKQKGYFFIDESLYCETHAKARVQPPEGYDVVAVYPNSKVELV
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacactgtgactctcgccggtccctcgccgtggggttttcgactggtgggtgga
cgggacttcagcacaccgctcaccatctccagaataacacctgcgagtaaagcagcgctg
agcgacttgtgccctggagacaccatcctaaccatcaatggagaaagtacagagaccatg
acacacatggaggctcagaaccgcattaaagcctgcacagatcagcttgtgttggccatc
agcagatctggaaaggtttggtctccaactggaatagaagaaaccaagacaagtccatac
accggaatactggagtcggagtcacagacctttcgaccaatcagcagtggctatagcccc
actccgaagagtccatcgcccaagagtcccatcacaggcggtgtgtcccacaataacggc
aactcaagaccaacgtacaacagtccagccggactgtattcgcacaacaacggcaatggt
gccctgccaaagcagatggcaggcctcagcctgggctctcctcacagtttcagccctgaa
ccaccaatgaattcatcaggcaaccgcaatggtttcgacccgcagtcggacgtctacagg
atgcttcaggaccccgaggaacctgtgtccgctcccaaacaatctggctcctttaaatac
ctgcagggaatcctggaagctgaggatgggggggtctcaccggtggacaggcatggggtt
cgaggcttgcgctccccggttaaatcccccgtcccgaagctgggcagccccatcacggct
cctctggcgcccatggccggcctacagaagctgcctcagtgcacacgctgcgggaacggc
attgtgggaacgattgtgaaggccagagacaagctgtatcaccccgactgcttcatgtgt
gatgactgtgggctgaatctcaagcagaaaggatatttcttcatcgatgagagtctgtac
tgtgagactcacgccaaggctcgtgtccagcctcccgagggctatgacgtggtggccgtc
tatcccaactccaaagtggagctggtctaa
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