Rhinichthys klamathensis goyatoka (western speckled dace): 130097140
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Entry
130097140 CDS
T09701
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130097140 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130097140 (ube3b)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130097140 (ube3b)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
HECT type E3
130097140 (ube3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
130097140
NCBI-ProteinID:
XP_056119829
LinkDB
All DBs
Position
Unknown
AA seq
1069 aa
AA seq
DB search
MFTATQTSKTQFLDKARIAREERKGYKEKERAATQIQALVRRFLCRCRLQREIRKEVDDF
IAVSDAGSTKRNALSIFKIARKLLFILSKDDKLRFEKLCRIILSSMDVENEPKVWYVSLA
LSKDLTIPWLKQIKDVLWVSCEFLKKLKPDILQDNKLVTLYLTMLITFTDTSTWKIIRGK
GEALKPALNRICENIMGHLNQKGFYSVLQILLTNGLARSRPSLSKGTLTAIFTLSLRPVV
AAHFSDNLLRSFLLHIMSVPAFISHLNTLTPDCMVTIQTHDLFRKFVLFLSREEQCLDIC
VCLEGSHTLCLLGNLIQLGYFNVKVLEQEAGHFVKDLTDMLSYCQRYVSQKKSNLTHWHP
VLGWFSQTVDYGLNESMPLVTKQLQCLWGVPVICTLFCDVLSKKLETQDPTPPPSLQPSS
LQNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTALTTLTQIRL
QILTGLTYLDELLPKLWAFICELGPQGGLRLFMECLNNDTEESKQLLAMLMLFCDCSRHL
ITILDDIEVYEEQISFKMEELVTISSFLNTFVFKMIWDGILENTKGEKLDLFHSVHGWLM
VLYERDCRRRFTPEDHWLRKDLKPSLLFQELEKGKKRAQLLLQYIPHVIPHKNRVLLFRN
IVTKEKESLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLG
VDEAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSSIHENHLQLYEFVG
KMLGKAMYEGIVVDVPFASFFLSQVLGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGD
VSDLGLTLSYDEEVMGQLVCHELIPGGKTMSVTNENKISYIHLMAHFRMHTQIKEQTAAF
IRGFRSIINPEWLHMFSTPEVQRLISGDNAEIDLDDLKKHTVYYGGFHSSHRVILWLWDI
LSSDFSPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFF
TIRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccgctacccaaacgtccaaaacccagttcctggataaagccaggatagcacgg
gaggaacggaaaggttataaggagaaagagagagctgctacacaaatccaggctctggtc
agaagattcctctgccgttgcaggttgcaaagggaaatcaggaaagaggttgatgatttc
attgcagtcagtgatgcaggttcaacaaaaagaaatgcattatccatcttcaaaattgca
agaaaattgttatttatattgagcaaggatgacaagttgagatttgagaagttgtgtaga
atcatactaagtagcatggatgttgagaatgaacctaaagtatggtatgtatctctggcc
ctttcaaaagatctcaccatcccctggctaaaacagatcaaagatgttctttgggtctcc
tgtgaatttctgaaaaaactgaagcctgacatactgcaagataataaattggtgacgctg
tacctgacaatgctgataacattcactgacacatcaacgtggaaaatcatcagaggaaag
ggggaggccctcaagcctgctttaaacaggatttgtgagaacatcatgggacatctcaat
cagaagggcttctactctgttcttcagattctacttacaaatggattggcaagatccaga
ccttccctttccaaaggaaccctcacggccatttttacgctgtcactcaggccagttgtc
gctgcacatttctcagacaacctgctgaggtctttcctcctccacatcatgtctgttcca
gcgttcatctcgcacctcaacactctcactcctgattgtatggtcaccatccagacccat
gacctctttcgcaagtttgtcttgtttttaagccgagaagagcagtgtttggatatctgt
gtgtgtctggagggaagccacactctgtgcttactgggtaacctcattcagctgggatac
tttaatgtaaaagttttagagcaggaagcgggtcactttgtcaaggatctgacagatatg
ttgtcatactgtcagagatatgtgtctcagaagaaatccaatctcacacactggcaccca
gtgttgggctggttctcccagactgttgactatgggcttaatgagtctatgccgttggta
acaaagcagttacagtgtttgtggggagttccagtgatctgcacactcttctgtgacgtt
ctcagcaaaaagctagaaactcaagatcccaccccaccaccctctcttcagccaagctca
ttacagaataacttacccgtcaaaaatctgttcaagagagcgttccaaaagtctgcgtct
gtgcggaacatcctgaaaccggtcggggggaagcgtgtggattcagctgaggtccagaag
gtgtgcagtatttgtgtgttgtatcagacggccctcaccacgctcacacaaatccgcctg
cagattctcacaggactgacgtacctggatgaactgctgcctaagctgtgggcatttatc
tgtgagcttggccctcagggggggctacgactcttcatggagtgtctcaataatgacaca
gaagagtccaaacagctcctggccatgctgatgctcttctgtgattgttctagacatctc
atcacaatcctggatgacatagaggtgtatgaggagcagatttcttttaaaatggaagag
cttgtcaccatctcctcgttcctcaacacatttgtgttcaagatgatctgggatggtatt
ttagagaataccaaaggggagaagctggacctattccacagtgttcacggctggctgatg
gttctgtatgagcgggattgtcgcaggagattcacgcctgaagatcactggctccgcaaa
gacctgaagcctagcctgttgttccaggagctggagaaaggcaaaaaaagggcacagctg
ctacttcagtacattcctcatgtcatcccacacaaaaatagggtgctgctgttccggaac
attgtgacaaaagagaaagagagtcttggattggtggaaacaagctccgcctctccacat
gtgactcatataaccattcgacgctcacgcatgttggaggatggttatgatcagctgcgg
cgtctacctgtcaattccattaagggggtgatccgcgtgaagtttgtgaatgatttagga
gtggatgaggctggaattgaccaggatggtgtgtttaaggagtttttagaagagatcatc
aagaaggttttcaacccagcgctcaatctatttaagaccaccagtgggaatgagagatta
tacccctccccaacctccagcatccatgagaaccaccttcagctgtatgaatttgttgga
aagatgctgggaaaggccatgtatgaaggcatcgtggtggatgtgccttttgcctctttt
ttcctcagtcaggttctaggtcaccatcacagcaccttctatagctccatagacgagctg
ccctccctcgactcagagttctacaaaaacctcacctctatcaagcgttacgatggggac
gtcagtgatctgggcctgactttatcctacgatgaagaggttatggggcagttagtctgt
catgagctaattcctggtggaaagactatgtctgtcactaatgaaaacaagatcagctac
atccacctgatggcccacttccgcatgcacacccagatcaaggagcagacggcagcattc
atcaggggcttccgtagcatcatcaacccagagtggctgcacatgttctccacccctgag
gtccagaggctcatctctggagacaacgctgagatagacctggatgatctcaagaagcac
actgtgtactatggaggtttccatagcagccacagagtcattctttggctgtgggacatt
ctctccagtgacttctcccctgaggagagagccatgttcctgaagtttgttaccagctgc
tcaagacctcctctgctcggttttgcctacctcaaaccccctttctcaatccgctgtgtg
gaagtatctgacgatcaggacacaggtgacactttaggaagtgttctccgtggatttttc
accatccgtaagaaggagccaggcggtcgcctccctacatcctccacttgtttcaaccta
ctcaagctgcccaactacagcaagaagagcatcctcagagacaaactccgctacgcaatc
agcatgaacactggctttgagctttcataa
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integrated database retrieval system
