Rhinichthys klamathensis goyatoka (western speckled dace): 130097251
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Entry
130097251 CDS
T09701
Symbol
shank1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
SH3_2
Ank_5
SAM_2
PDZ_6
PDZ
SH3_1
FERM_f0
SH3_9
Motif
Other DBs
NCBI-GeneID:
130097251
NCBI-ProteinID:
XP_056120027
LinkDB
All DBs
Position
Unknown
AA seq
2468 aa
AA seq
DB search
MTMPLSPLSSDEEQQRMLGNSQHLYPGAEEEEEEEEEMDDDGVDEEGEEENGELELDDEE
EVDDEDDIRRGPGRLRGGREEGHRQKGTMAGRLPGDKPLRPGNPGHAANPYSSNPGPIHQ
TAANQQQQQQRKLRERSSSNAPDDTHIAMMVFRIGIPDIKQTKCLRFNPDATVWKAKQQV
LCSLTESLRDVLNYGLFQPATDGHDAKFLEEERPLREYPQSFEKGVPYLEFRYKTRVYKQ
TNLDEKQLAKLHTKASLKKLMDCIQTGAADKVAKLIDKGLDPNYHDPDTGETPLTLAVQT
ESGGGENIRVLVMGGAHIDFRAKDGLTPLHKAVRAHGHTALLTLLSLGASPDYKDRRGLT
PLYHTVLIGGDTSCCETLLYHRAKLGLRDENGWDETHQACQNGNSQHLEHLLFYGADSSS
QNASGNTALHICALYNKESCVRILLYRGANKDTKNNSGQTPFQVAVMSGHFELGEIIKNH
RESDVVPFLESPKYAPQRRESSRTLGLPHPHPFLRANSDNSMNVPDWIAFPNAAGSNIVS
VQGLKHGGTLRSSSSPRGARTRSPSRGRTGDRDDRSRQTRGRQGAGSISSQGTASGQRRR
LYSAVPGRVFVATRSHSAQGDREISFNKGDKVKVLSVGEGGYWEGTVRGRTGWFPSDCVE
EVAHRSLESRSESRSERAKRLFRHYTVGYYDSFDAPSDYIIKEKTVLLQKKDNEGFGFVL
RGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQV
VNMIRQGGNSLMVKVVMVTRNPDMEEGVRKKIPQQSKRLSTPAIALRSKSMTSELEEMGK
ASSAPWKKKSEFESSQATEKKRTVYQMALNKLDEILAAAQQSISTNEAPGPRAQGVKRER
GRGFYNETNFDQSGMGMTSSGAGLGYDRGQFVSGHGPPHGMLRQKSIGVPEEEKQFLHPP
TMKFARSLSVPGPDDIPPPPTTAPPEPPFSSAPPLGFRGKTSQQPSVSVSQSTSSSAHYQ
LYSQSVHVTHGPRDRSPGPPTGSGAGDLAYSHAQAHPAVPSRTASRKVIGYTGDLSGAGG
AAGAKATVLRRGYSNAVPPTSVATVIPQQQQTTQGQPSRMDRSGIGTGAGAGGVPKGGAR
RGKGPLVKQSKVEDLRQGQGTLEGKGSVEKSSIPIPTIIVKAPSTSSSGRSSQGSSVEAE
PSPPGESDSSKHHPVVPPPAPTVPPPAPPSIPAPPPPSLPSLRTQESLDFTSQFGAAIVG
AARRDRERFHEARRKSASFFLSAEEELGGAGGAGGRTQTSQQQLSSQPSPRLRPSKSIDE
GMFSGDTFIHHTRSMPPAFGLPEYSSPAPPGDYQPKSVPADFYGAEGRQQQQQQASTTTF
IHPLTGKVLDPSSPLGLALAARERALKDDGRIRRERTTEHHFSRQLSSIGAFPSSTAQST
SHNSYSMASSSPATSSAAQSSSSSSYLVTSSSLAATTTSTRPPSPRILRGAGSSWGEEAG
VGERADREAASTSAPREGLRVRFSEDKTVHTHHYQSHHYQPTYKERERERQRERSRERER
EREIEKAQTQLLQQSAQPTTQQPRRPSFLRMESEAGAYILSLTPPSPPSTAAPTRPSVGP
TGEGGSGTGLMVLPPPAPSVDVDDEFAFVDTLPPPLEFANSFDRGLSYSAMMSHNVTARQ
QLHPPPPPPPPPPPPTKDTFMAGFPPHTPLPSPQAGDSTTSSLTSYDSEVANLTQSAPSP
SPSSPNPLPPPSPSTLQPSGPPPPPPPSVSPPPPPTSYHRPFGLSQSQHLYNSTHSTGRS
SSPTPPPLSIPAPPAYRGPPVATSTPATSVSLRGASTVTASCSTTASSTVASSSTTTSAA
AVTPHTRMATVSTVATGGSRRPSAEHRPPPCAAAAKSSESQETVVDSGIEELDSRSSSDH
HLDNILALSGSGVRDRLERAGIGSIGGVGERGGSTEADRTSGADFLESYMSYLDGQTFEM
HNAKAASTASTYPKTQRYREGSRPGDLRRQTSTAPPAYHRRREEEEEEDEAEEGEEEDFN
ARDGYVLREGPGIARSSVMYFDRPRTPEIKPLWGDGSAGSMGEGGGQTVGTYVEARKLHP
PVSGMKASIINELSTKLQQRSKGTENWGAQRSLSRHRYLFSEDSTGALSPPSVRSSSPSP
VHLSQPALSPSPTPSSQPLFPNWARSPSPQPPAASSQPPPRSHSPVSPSSYSPYPTSPKH
RPVYRTKALEFQFIPSRESRKAESHHAQRRRAPSPLISPSDRPKLGPPRPSSLPILPTTP
LYSSLYDLRGSITPPSPANPLGDPYFSPSPPLFAPSGAPPPPNSSLVVSRSLSPTHFLSG
TSSPPLHPIPPPTCLSYPHLPPPSPTKPFASKPLPYWTKYDVADWLGYLNLGEHRERFLD
NEIDGTHLPSLTKDDYLDLGVTRVGHRMNIERALRRVMDRLSSSTFPISALSPRDERRDR
RRDEANRS
NT seq
7407 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgccgctcagccccctctccagcgacgaggagcagcaaaggatgctgggaaac
agtcaacacctttatccaggggcggaagaggaagaggaggaggaagaggaaatggacgat
gacggcgtggacgaggaaggcgaggaggaaaatggagagctggagttggatgacgaagag
gaggtggatgatgaagatgacatcaggcgtggaccagggcgtttgagaggaggcagggaa
gaggggcacaggcaaaaaggcacaatggctggacgactcccaggagacaaaccgctacga
cctggcaacccgggccatgcggccaacccttattcgtccaaccctggacccatccaccaa
acggcggcgaatcagcagcagcaacagcagcggaagctacgagagcggagctcgagcaac
gcacctgacgacacacacatagctatgatggtctttcggattggcattcctgatatcaaa
cagacgaagtgtctgaggttcaaccctgatgcaaccgtatggaaggcgaagcagcaggtg
ttgtgtagtctaaccgaatccctaagggatgttttaaactatggccttttccaacctgcc
actgacgggcatgatgccaagttcctggaggaagagaggccgctccgcgagtacccacaa
tcctttgagaaaggagtaccctacctggagttccgctacaaaaccagggtgtacaaacag
acaaatctagatgagaaacagctggccaaactacacactaaggccagtctgaagaagtta
atggactgcatacagaccggcgctgcggataaggtagccaaacttatagacaaaggactt
gaccccaactaccacgaccctgatacaggagagaccccactcactctggccgtgcagact
gagtcgggtggaggggagaacatcagggtgttggtgatgggtggagctcacattgacttt
agggcaaaggatggcttgactcctctccacaaggctgtcagagcacatggacacactgcc
ctactgacgctgttgtctttgggggcatctcctgattataaggaccgccgtgggctcaca
cctctttaccacactgtgctgatagggggcgacacctcctgctgcgagaccctcctgtac
cacagagccaagctggggctccgtgatgagaatggctgggacgaaacccatcaggcttgt
caaaatgggaactctcaacacttggagcacctacttttttatggtgcggattcctcatcc
cagaatgcctcaggaaacactgccctgcacatatgtgcattatataacaaggagagctgt
gtccgaattctgttgtatcgaggagccaataaggacacaaagaataacagtgggcagacc
cccttccaggtggctgtgatgtctggccattttgagctgggagaaatcattaaaaaccat
cgagaatcagacgtagttccctttttggagtctccgaagtacgccccccagaggagggag
agttcacgtactcttggattgccccatcctcaccccttcttgcgggccaacagtgacaac
agcatgaacgtaccagactggatcgcctttcccaatgctgctggatcgaacattgtctct
gtgcagggtctaaagcatggcggcaccttgcgtagttccagcagtccccgtggagcacga
acccgttccccatcccgtggccgaacaggtgacagagacgatcggagccggcaaacgcgt
ggaagacaaggggcgggctccatcagtagtcagggcactgcaagcgggcagcggcggcgt
ctctacagtgccgtgcctggccgtgtgtttgtggccacccgctcgcactcggcccagggg
gaccgtgagatcagcttcaacaagggagacaaagtcaaagtgctgagcgtgggtgaagga
ggctactgggaggggacggttcgagggcgcaccggctggttcccttctgattgcgtggag
gaggtggctcaccgcagcctggagtctcgttcagagagccgcagtgagagagccaagcga
ctcttccgacattacaccgttgggtactacgacagctttgacgcgcccagtgactacata
atcaaggagaagacagtcctcctgcagaaaaaagacaatgagggttttggctttgtcctg
agaggagccaaggctcagacccctatagaagagttcactcccaccccagcctttccagca
ctgcagtaccttgagtctgtcgacgagggaggcgtggcttggagagctggtctgcgaatg
ggagacttccttatcgaggtgaatggtcagaatgtggttaaggtgggacacaggcaggtg
gtcaatatgatcaggcaaggtggcaacagtctcatggtcaaggttgtcatggttacccgg
aatcctgatatggaggaaggggtcagaaagaaaatcccacagcagagtaaaagactgagc
actccagctatcgctctgcgctccaaatccatgacatcagaactggaagagatgggtaag
gcttcctctgccccatggaaaaaaaaatcagagttcgaatcttcacaagctacagagaag
aagaggacagtttatcagatggctttgaataaattggatgagattttagcagcagcacag
cagtccatcagtaccaatgaagctccaggaccccgggctcagggggtaaaaagagaacgg
ggcagaggcttttataatgagacaaatttcgaccaatcgggaatggggatgacatcatct
ggggcagggctaggctacgaccgtggtcaatttgtgtctggccatggccctccgcacggt
atgctgcgacagaagtccatcggggttcctgaggaggagaagcagtttcttcatcctcca
accatgaagtttgcccgcagtctttcagtacctggcccagatgacatacctcctcctcct
actacagctccccctgagccccctttctcttcagctcctcctcttggctttaggggcaag
acatcccagcaaccgtctgtttctgtttcccaatccacttcctcttctgcacattatcag
ctctactcacagtcagtacatgtcactcatggaccccgagacaggtctcctggaccacct
actgggtccggagccggggaccttgcttattcccatgctcaagcccatcccgccgtgcca
agcaggactgcctccaggaaggtgattgggtacacaggggacctttcaggggctggagga
gcagcaggggccaaggctacagtgttgagaaggggctacagcaacgcagtcccacccacc
agtgtcgctactgtgattccccaacagcagcagactacacagggccaaccttccaggatg
gaccgcagtgggatagggacaggagcaggggcaggtggtgtaccaaaaggtggtgcccgg
agagggaaggggcccttggtgaagcagtcaaaggtggaggatctacgtcagggccagggc
acactggaagggaaggggtccgtggagaagagctccattcctatcccaaccatcattgtt
aaagccccttccaccagcagcagtggtcgcagtagccaaggcagcagcgtggaagccgag
ccgtctcctccaggagagagtgacagttctaaacaccatcctgttgttcccccacctgca
cccactgttccaccgccagcccctccatctataccagctcctccacccccatcactgcca
tcacttcgtacgcaagagagtttggacttcaccagccagtttggtgctgccatagtaggg
gccgctcgcagggatcgagagcgattccatgaagcacgacgaaagagtgcctcctttttt
ctttctgctgaggaagagttgggtggagcaggaggagcaggaggacggacccagacttcc
caacagcagctgagttcccagccttcaccacgcctgcgaccatccaaatctatagatgaa
ggcatgttctcaggtgatacctttatccaccacacacgcagtatgcctcctgcctttggc
ctgcctgagtactcctcacctgctcctcctggggattaccagcctaagtctgtacctgct
gatttctatggggcagaaggccgacaacaacagcagcagcaagcctccactacaacgttc
attcacccattaacggggaaagtcctggacccttcatccccactaggcttggcattggct
gcacgggaacgtgccttgaaggatgatggtcgcatacgtagggagaggactactgaacac
cattttagccgtcaattgtccagcattggggcctttccctcatccactgcacaatcaaca
tcacacaactcttactcaatggcctcttcttcccctgcaacctcatctgctgctcagtcc
tcgagctcctcctcataccttgttacctcctcatcactagctgccaccaccacatccact
cgccctccatctcctaggatcctgcgtggagcagggagcagttggggtgaggaagcaggg
gtaggagagcgtgcagatagggaggctgctagcacctctgctcctagagaaggcctaagg
gttcgtttctctgaggacaaaactgtccatacgcaccactatcagtctcaccactatcag
cccacctacaaagagcgtgaaagagagcgtcagagagagaggtcacgagaaagagagaga
gaaagagaaatagaaaaagctcagacccagttactgcaacagtctgcacagccaacgacc
cagcagcctcgacgcccctcgttcttgaggatggagagtgaggctggggcgtacatcctt
tcattaacaccaccatctcctccttcaacagcagcccctacacgtccttcagtaggaccc
acaggtgaaggtggaagtggcacaggtctgatggttcttcctcccccagctccctcggta
gatgtagatgatgagtttgcttttgtcgatactctccctccacctctggagtttgccaat
agttttgatcgtggtttaagctactctgcaatgatgtctcacaatgtgacagcccgtcag
cagcttcatcctccaccaccacctcccccaccacctcctccccctacaaaagacaccttt
atggctgggttcccacctcacacaccactgccttcaccccaggcaggagattccacaact
tccagtcttacttcctatgacagtgaggttgctaacctaacccagtcagccccgtctccc
tctccatcttcccccaaccctctaccgcctccctccccctctaccttgcagccctctggg
ccacctccacctccacctccctctgtatcacctccgccaccacccacctcctaccatagg
ccgtttggcctatctcagtcgcaacacttatacaacagtacacactctactgggcgctcc
tcttctcccacaccacctcctctctctattccagctccacctgcctaccgggggccccca
gtagcaacatccacccctgcaacttctgtttctctcagaggcgcctcaactgtgaccgca
agctgttccacaactgcttcttcaactgttgcctcttcttccactactacttctgctgcc
gctgtcacaccacacacacgcatggcaactgtctccacagtagctacagggggtagcagg
cggcctagtgcagagcatcgtccaccaccctgtgcagctgcagccaagagcagcgagtcc
caggagacagtggtggattctgggattgaggagctggacagccgaagcagcagtgaccat
cacttagacaacatccttgcactcagtggtagtggggtcagagataggttagagagagca
gggataggtagcataggaggagttggagagagaggtgggtcaaccgaggctgacagaaca
agtggggcagactttttagagtcttacatgagctaccttgatggacagacttttgaaatg
cacaatgccaaagccgccagcactgcatccacctacccaaaaacacagagatacagagaa
ggcagccggcccggagatcttcggcgccaaactagcacggcaccccctgcctaccaccgt
cgtagggaggaggaagaggaggaggatgaggcagaagagggagaggaggaagattttaat
gcccgtgatggctatgtgttgagggaagggccagggattgctcgctcctctgtaatgtac
tttgaccgtccccgcactccagagataaaacctctgtggggtgatgggtcggctgggtcc
atgggggagggagggggccagactgtggggacatatgtggaggcacgtaaactgcatcct
cccgtgtccggtatgaaggcaagcatcatcaacgaactaagcaccaaattacagcagagg
agcaaaggaacagagaactggggggctcagagatcactgagcaggcataggtatttgttc
tcagaggactccacaggtgcactgagtcctccctcggtccgctctagctccccatctcct
gttcatctctctcagcctgccttgtctccctccccgaccccttcctcccagccactcttc
ccaaactgggctcgatccccttcccctcagccccctgctgcctcatcccagcctcctccc
aggtcccactcacctgtttctccctcttcgtattcaccataccccacctcgcccaaacac
cggcccgtttatcgcaccaaagccctggagttccaatttatccccagccgagagtctcgt
aaggcagagtcacatcatgcccagcgcagacgagcacccagcccgttaatttctccatct
gaccggcccaagcttggccctccccgcccctcttctcttcctattctccccaccacgccc
ctctatagcagcctatatgacctccgtggttctattactccaccctcacctgccaatccc
cttggggacccctacttctccccctctccccctctctttgccccctcgggtgctcccccg
cctccgaattcctctctggtggtctctcgctccctgtcccccacccacttcctgtcaggg
acttcatccccacctcttcaccccattcctccacccacttgcctgagttacccccacctc
ccacccccttcacccaccaaaccctttgcctccaaaccactcccatactggaccaagtat
gacgttgcggattggctgggctacctgaacctgggtgagcacagggagcgtttcctagac
aacgagatcgatggcacgcacctgccctctcttactaaggacgactacctggacctgggt
gtgaccagggttggccatcgtatgaacatagagagggcgctcaggagagtgatggacagg
ctgtcttctagcactttccccatttccgccctctcccctcgagatgaacggagagacaga
aggagagatgaggccaaccggagttga
DBGET
integrated database retrieval system
