Rhinichthys klamathensis goyatoka (western speckled dace): 130097369
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Entry
130097369 CDS
T09701
Symbol
grin2da
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04020
Calcium signaling pathway
rkg04080
Neuroactive ligand-receptor interaction
rkg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130097369 (grin2da)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130097369 (grin2da)
04082 Neuroactive ligand signaling
130097369 (grin2da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130097369 (grin2da)
Ion channels [BR:
rkg04040
]
Ligand-gated channels
Glutamate (ionotropic)
130097369 (grin2da)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
BTK
Motif
Other DBs
NCBI-GeneID:
130097369
NCBI-ProteinID:
XP_056120141
LinkDB
All DBs
Position
Unknown
AA seq
1917 aa
AA seq
DB search
MAARPALSFLLAVLACTGPAQPSPPLLLRPRERERDSGGASGGVNIAVVHSGSSHLPETS
AGVGGVGGASSAGSGSGAGPSSSSSNSGTGFLSRAWSGQVGESVMTPWGPANVIWLAVNE
SSPGSLLLQLCELLATTPLQGLVFEEEKPPPPNRAPLAPMLEFVSAQTGVPIIAVGGGAG
LGREPQESGSVYLQFLCSTSLQLDVIFEVLEEFDWTAFSVVTTRHHGYEDFLAMVEGMID
GSFIGWERKSVVMLNLTDDPGGARTRRLLKENEAQVRLLYCSQEEAGHIFKAAWASGQAT
PSHMWFAVGPGLAGLGLEGLPKAVFAVRPQGWRDEPRRRIAKGVSVLTHGAMALRREYAG
ARGTSFAGNCMMDGNQTQRVPDRIRFFSNITLSGRDYSFNNDGYLANPLLDVISYTAGRS
WEEVGWWENGVLRLRYPPWSRYGPFLKPLDDSQHLRVVTLEERPFVIVEPADPGTGSCIR
DSVPCRLPLNNSMVVEGIQSMKHCCKGFCIDVLKRLAKIVGFTYDLYLVTNGRHGKNIDG
EWNGMVGEVVSKRADMAIGSLTINEERSEVVEFSVPFVETGISVMVSRSNGTVSPSAFLE
PYSPAVWVMMFVMCLSVVAVTVFIFEFLSPVGYNRSLQSGKKLGGSKFTIGKSIWLLWAL
VFNNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQ
HPTDQYPPLRFGTVPNGSTEENIRSNYPNMHQYMVRNNQRGVEEAIDNLKTGKLDAFIYD
AAVLNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIDML
ERLWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCMGR
SGGLDFLLAFSRGMYSCCNFEDERDHGCSQSTLPQYHHVSTVPPPPPPHVISTAMANPNI
AKAQQQQQQQKQHHQQPPPVYNTLLPGSPPSGGHSGMALGPSNSPILGAPMPCSTFLPRH
DRRLAVVDRWTRPKVGPEKPSGVSSGITDLTQFQGMPPHWGAGITGGDGGLDEYKRYYGP
IDPEGLGVSAEPQNMGTQTPKTKHRGTKSSGNPRLPPKGQASGHLPINPALPHPSPPQQS
IWRRSSFSKRKGSGAPLYENIIPLGRRGGGRYGMRDGGGRRGRRPPPLPLPIPVPLSSPT
QTPPSPSPSICSTSTSSSTSSTSSSSSSSESVSRSNSPSSSSSYTSSQSFRYRADVQDVY
EEYDTDELTEESSLLLGRRKSRSRMSSRSLPSSPPPPPIPPRKPCPQRAQVRDRAGSQLA
QLQEWWASWGEKEKGRRAAGDREVKEEKRHHKERERERKRRKKGRKKKKREERERERERK
RRKVKKKKKKEEKSRRREREKRPEQEEVDVDRKDVFEKGIGQECYSYPALRRSSFRKKSE
SSTKSYEWDIIRDGVKRDRDDQGGDNEEGSRGKERHHRSPKSLHHSRPRSNNKHFSTSNK
PPSTVKFWGSGNPTSESPSPFVPLLPITSKRRKSVGAERDEHGRAVESRPLLENHCRGKP
CSREGLSFHEWESEEEDEESEVERSRPEEQGRRRESRGMNSESERDREKTVEIYTDDEGS
SGEFGKFERYWEGHEGRAVGGIGGGGWFFGTYPARERGSSINSRDDSFLGLGGRESSLGF
GAGTGWGSGGLGSNQWPPTPLTPPPPRRYWSVDKLPVKTEKKSKSRSQEKSRGHTSCSCQ
SPHHSASTHSKWNRVTSRSQEELLPHCHSFSSSVRPKRQSSKPDRAQSQAKSGSQSNINA
QRPQRSDRSRQPPSPPQSLPPSLPSPMVPALPAPPSSSHHIHVPPPTSSSSVSSPSVVSS
TPGAPQPSSLSSSSAKLQYQKLRSVPQRYQSPHLPLKTKSLCSRRGSAQFSSVESEV
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaggcccgccctttcgtttctattggctgtgctggcgtgcactgggccggcc
cagccctcccccccactgctgctccgcccccgggagagagagagggactcaggaggggct
tcgggcggagtcaacatcgctgtggttcactccggctcctcccacctcccggaaacgagc
gctggggtggggggcgtgggcggggcctcttcagcgggctccggctccggtgccgggcca
agcagcagcagcagcaactcggggacgggttttttaagtcgggcctggtcaggacaggtg
ggtgaaagtgtgatgacaccgtggggtcctgcgaacgtgatctggctggccgtgaacgag
agcagtcctgggagcctcttgctacagttatgcgagttactggctaccactccactacaa
ggccttgtgtttgaggaagagaagccaccaccgcccaaccgggcaccgttagcacctatg
ctggaatttgtctcggcccagacaggagtgcctatcatcgctgtgggaggaggggctggt
ttggggagggagccacaggagagcggctccgtctacttgcagttcttgtgctccactagc
ctgcagctggatgtcatttttgaagtcctggaggagtttgattggacggcgttctctgtg
gttaccacacgccaccacggctatgaggatttcctggccatggtagaaggcatgatagat
ggctccttcatcggttgggagagaaagagtgtggtgatgctcaacctgaccgatgacccg
ggaggggctcgtacccgcaggctactgaaggagaatgaagcacaggtgcgactcctgtat
tgctcacaggaagaggcagggcacatttttaaggctgcatgggcatcagggcaggctact
ccatcacatatgtggtttgcggtgggccctggtctggcaggacttggccttgagggtcta
cccaaggctgtgtttgctgtgaggccacagggatggagggacgagccacggcggcgaatt
gcaaagggtgtgtcggtactgacgcacggtgctatggctttgcgtagggagtatgctggg
gctcgagggacgagcttcgctgggaactgcatgatggatggaaatcaaacccagagggtg
ccagataggatcaggttcttcagtaacataactctatctggacgggactattcctttaat
aatgatggttatctggcaaatccgcttctggatgttatctcctacactgcaggaagaagc
tgggaggaggtgggttggtgggagaatggagtgctgcgtctgcgttacccaccctggtcc
aggtacggccccttcctcaaacctctggatgattcccagcacttgcgcgttgttactttg
gaggagaggcccttcgtcatcgtagagcctgctgatcctggaacaggctcctgcatcaga
gactcggttccgtgccgtctgccactcaacaacagcatggttgttgagggcattcaatcc
atgaagcactgctgcaaaggcttctgtattgatgttctcaagcgcctggctaaaatagtg
ggcttcacctatgacctctatctggtgaccaatggcaggcatggaaagaacatagatgga
gagtggaatggaatggtcggggaggtggtgtccaagcgggccgacatggcgatcggctcc
ctgactattaatgaagagaggtcagaggttgtggagttctctgttccgtttgtggagact
ggcatcagtgtcatggtctctcgtagcaatggcactgtgtcaccatctgctttcctcgag
ccgtacagcccagctgtgtgggttatgatgttcgtcatgtgcctgtctgtggtggctgtg
accgtttttatattcgagttcctcagccctgttggatataaccgaagcttacagagcggg
aagaagttaggaggttcaaagttcaccatagggaagtctatttggctgctatgggctctg
gtgtttaataactctgttccggtggaaaacccgagaggcaccaccagtaagataatggtg
ctggtctgggctttctttgctgtcatcttcctagccagctacactgctaacctggctgct
ttcatgatccaagaagaatacatcgacactgtgtcgggcctcagtgataagaagtttcaa
catcccacagatcagtatcctcccttacgatttggcactgtcccaaacgggagtacggaa
gagaatatacggagcaattaccccaacatgcatcagtacatggtgcggaacaatcagaga
ggagtggaagaagccatcgacaaccttaaaaccggcaaactggatgcattcatatatgat
gcggctgtcctgaattacatggctcgtaaagacgagggctgcaaagtaatgaccatcggc
tctggtaaagtgttcgctacaacaggatatggcattgccttacacaagaactcccgctgg
aagcggccgctagatcttgccctgctgcagctagttggagatgatgagattgacatgctt
gaacggctctggttgtctgggatctgccataatgataagattgaggtgatgagttccaaa
ctagacatagacaacatggcaggagtcttctatatgcttctggttgccatgggcctaagt
ctgctggtgtttgcatgggagcatcttgtctattggaagcttcgccactgtatgggccgc
tcaggaggacttgacttcctactggctttcagtcggggaatgtacagctgctgcaatttt
gaggatgaaagagatcatggatgttcccaaagcacacttcctcaatatcatcatgtttcc
acagttcctcctcctccgccacctcatgtgatctctacagccatggccaatcccaatatc
gctaaggcacaacaacagcagcaacaacaaaagcaacaccaccagcagccaccaccagta
tacaatactcttcttcccggctctcctccgtcaggtggacattctggaatggctctaggg
ccatcgaacagtcccattcttggagcacctatgccttgctctactttcctaccacgccat
gatcgccgattagctgtggtagatcggtggacacgtccaaaggtgggccctgagaagccc
agtggtgtgagcagtgggattacagacttaacacaattccaaggcatgccccctcactgg
ggtgcaggaataactggaggggacgggggtctggatgagtacaagagatactatgggcca
attgatccagagggcttaggggtatctgcagagcctcaaaacatgggcactcaaactcca
aaaactaagcatcgagggacaaaatcctctggaaatccacggttacctcctaaaggtcaa
gcttctggacacttgccaattaaccctgctttgccacatccctctccaccccagcaatct
atctggaggagaagcagcttctcaaaaaggaagggctcaggagcgccactgtatgaaaac
atcattccactcggaagaagaggtggcggcagatatggaatgagggatggtggtggaaga
agaggacgtcgtcctcctccccttcccctgcctataccggtgcccctctcttccccaact
caaactccaccctcgccttctccatctatatgttccacatccacttcctccagcacctcc
agcacctccagttcatcctcttcttcagagtcagtctcccgatccaattctccctcctct
tcatcatcgtacacatcatcacagagcttcagataccgagcagatgttcaagacgtgtat
gaggaatacgacaccgatgagcttacagaggaatcaagcttgcttttggggaggagaaaa
agtcgttctcgtatgtcttctcgatccctgcccagcagtcccccgcctccacctatacca
ccccgtaaaccttgcccacaaagggcgcaggtgagagatagagcaggcagtcagcttgca
cagcttcaagagtggtgggcatcttggggggagaaagaaaaaggtagaagagcagctggg
gatagagaagttaaggaggagaaacggcatcacaaagaaagggaaagggagagaaagagg
aggaagaagggtagaaagaaaaagaagagagaagagcgtgaaagagaaagggagcgtaaa
agacgtaaagtgaaaaagaaaaagaaaaaagaggagaaatccagaagaagagagagggaa
aagcgacctgagcaagaggaagtagatgtggacaggaaagatgtttttgaaaaaggaata
ggacaggaatgttattcctatcctgcactgaggcggagctctttccgaaaaaagagtgaa
agctctaccaagagttatgagtgggatattatcagagatggagtaaaaagagatagggat
gatcaaggaggagataatgaagaaggcagtaggggaaaggaaaggcatcacagaagccca
aaatcccttcaccactccaggccaaggtccaacaacaagcatttttccacctcaaacaaa
ccaccttcaaccgtcaagttttggggtagtgggaacccaacttcagagtctccatcgcct
tttgtacccctacttcccatcacctctaaaagacgaaagtctgtaggagctgagagagat
gagcatggaagagctgtagagagtcggccccttttggaaaatcactgtagaggtaagcct
tgctcgagagaaggcctgtcgtttcacgaatgggaatccgaggaagaagatgaagagtct
gaagtggaaagaagtaggcctgaagaacaggggagacggcgagaaagcagaggaatgaac
tcagagtccgaaagggacagagaaaaaactgttgagatatacacagatgatgaaggttcc
tctggagagtttggtaagtttgagagatactgggagggtcacgaaggaagggcagttgga
ggcattggaggaggaggatggttctttggcacctaccctgccagagaaagaggaagcagt
ataaatagtagagatgactcctttttgggattgggtggcagagaaagtagcttggggttt
ggtgcaggaacaggatggggatcaggaggcttaggatcaaaccagtggcctccaactcca
ttgactcccccaccacctcgaagatactggtctgtagataaattaccagtcaagactgaa
aagaaatctaaaagcaggtctcaagagaagagtcgaggccacacatcctgttcctgccag
tcgccccatcactctgccagcactcactccaaatggaatcgtgtgacttctaggagtcag
gaggaactactcccccactgccacagtttcagcagcagcgtaaggcccaaacggcaatca
tccaaaccggatcgggctcagagccaggcaaaatctggaagccaatccaacatcaatgca
caaagaccacagcgctcagaccggtcccgacaaccgccatcccctcctcaaagtctacca
ccttctttaccatctccaatggtccctgcactcccagcaccaccctcttcctctcaccat
atacatgtaccaccacctacctcctcctcctcagtttcctccccttcagttgtctcatct
acacctggtgccccacagccctcctctttgtcctcctctagtgctaagctccaataccag
aaactgcggtcagttccccaacggtatcaatccccacatcttcccctcaaaaccaagagc
ctatgctcccgtcgaggctctgcccaattctccagtgtggagagtgaggtttga
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