Rhinichthys klamathensis goyatoka (western speckled dace): 130097499
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Entry
130097499 CDS
T09701
Symbol
arhgef10
Name
(RefSeq) rho guanine nucleotide exchange factor 10 isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130097499 (arhgef10)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130097499 (arhgef10)
Membrane trafficking [BR:
rkg04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130097499 (arhgef10)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
130097499 (arhgef10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Hanta_Gc_C
DUF6059
IQ_SEC7_PH
Cu-binding_MopE
Motif
Other DBs
NCBI-GeneID:
130097499
NCBI-ProteinID:
XP_056120346
LinkDB
All DBs
Position
Unknown
AA seq
1413 aa
AA seq
DB search
MDVEDFPPPPPDLLDDVDEGERFEFDSGSDEGPEADRPPPDPEGISVPPPCSSAARDAPV
NGTSPNPENLLTAEADLPPPPQNCLTNNSPLAHEPFPQGDLPPPPPPIELCHNAAEGQDR
DAPPALEGATGAAAHKEQDESRGACVVPTPKAKVSPYSVIDIAPIQQQLVSEQSGPPSSP
PANESERDIQDVPSSPGLPSGYSVPVPCGYATPSNVPVIRPTYTTPVIIRHFSMDEDVTV
MGAGNTPVDSVFSEECPVIREEDALTKWVSDPANTAWMESPDEVIYDDVPRENSGSTTDP
DEMIYDDVEFGEEGGSSSLDNGWSSSEFESYEEASDSENGHGENGLPDAFVRGRAPSKKT
HLSEDLTRLKEHYERKMRDLMANTVGTVELQQLKHKHEQKMQRLVKAAKDGTKDGLQKTK
AAVRKGRSFIRTKSLCYEKKPSCFDEESDLFIEVECFNVDPVLRPAPDGLSQHQVMRRCI
LEMILESEKNYLEALKRILEQYEKPLAEIEPRLLSDRKLKVVFYRIREILQCHALFQMAL
ASRVSDWDELEMIGDVFVASFSKSMVLDAYSEYVNNFSLAMGVVRKACASKPCFLDFLKH
RQETNKDHLTLYGLMMKPIQRFPQFILLLQDMLKNTPVGHPDRLPLQMALTELETLAEKL
NERKREADQRCEIRHIAKAMNEHYLNKLLSSGSRYLICSDDVVETVYNDRGEIIKTKERR
VFLLNDVLMCATPNQRPSQDGVSVGAGGEGVPTGQRFLLKWSVPLSFVEVVEFGSSEEMG
DSRFPPLHSGDKVVINAKPNKLYMGPGQLYQDLQNLIHDLGLVNQISTMISSLKGNYQNV
NGTVAQDWVSGLQRLILKKEEEIRAADRCRIQLQLPGKQDKYGRPTFFTAVFNTFSPSIK
QAWISNLQMAKLALQEDNIQGWFCAEDDGNQMRKQNHPLLLRQMAVVMSKLQEFKVECAV
HNPEPHVNTDSTADLPVMGHGCVWVASCTNHMGQVSIVALQNSNPKVTECFNVESRILCM
TFVPLDEPVENVEGKPEDRKANDTPTVCLGMEEGSISVYKSSQRAKKVRLQHFFSPDKSS
VTCLVYKSGCLYAGLVSGSLVVYSRADDGSWVESGARVLKLGVLPVKALLVVGEHVWASS
GGQIFIISTQTHTVEHQFEAHQEEGMIVSHMVVAGVGIWISFSSGSTLRLFHTETLDHLQ
DINITTAVNNILAGQQRVSVSSLLVSHGLLLVGTNLGVTVALSVPRLQGIPKVTGRGMVS
FHAHHGPVKFLTMATAVCNVSQATMATLTSSTPSQCQPGAQEVQGTQLDENCSGLSSPSH
APVLQDSLSSSCGSLALSQGSLEHGPEDGAIYDLLNEPAHFQKAKQTERANVSSLLVVSG
GLGHRRINRKTKQSKHEEMVSTIMVWQIPLPNL
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggaggatttcccccctcctccaccagacctgttggatgacgtagatgaaggt
gagaggtttgagtttgacagcggtagcgatgaaggccccgaggcggatcggccaccccct
gaccctgagggaatctccgtgcctccaccctgctcatcagcagccagggacgcacccgtg
aatggaacaagtccaaacccagagaacttactcactgcagaggctgatctgccccctcca
ccccagaactgcctcactaataacagccctttggctcatgaacccttcccacagggtgat
ctacctcctcctcctcctcccatagagctctgtcacaatgcagcagaaggccaggacaga
gacgctccaccagcactagagggcgctacaggagctgcggctcacaaagagcaggacgag
agcagaggtgcctgtgtggttcccaccccgaaggccaaagtcagcccctactctgtgatt
gacatcgcccctatccagcagcagctggtgtcagagcagagcggccctccctcctctccc
ccagccaatgagagtgaaagagacattcaggatgtacccagtagcccagggttgccctct
gggtattcagtgccagtgccctgtggttatgcaacgccctcaaatgtgccggtgatccga
ccaacctacacaaccccagttatcatccgacacttctctatggatgaagatgtgactgtg
atgggagctggaaataccccagtggacagtgtttttagtgaagagtgtccagtcatcaga
gaggaagatgctcttactaagtgggtatcagacccagcaaacacagcctggatggagagt
ccagatgaagtgatttatgatgatgtaccgagagaaaactctggatccactacagaccca
gatgagatgatctatgatgatgttgagttcggggaggagggcggcagcagctcgctggac
aacggctggagctccagtgagtttgagagctatgaggaagccagtgactcagagaacgga
catggagagaacggtctcccagatgccttcgtcaggggccgtgcacccagcaagaaaacg
catctgtctgaagatctgacgcgtttgaaagagcactatgagagaaagatgcgagatctc
atggcaaacacagtgggaacagtagagctacagcagctcaaacacaaacacgagcagaag
atgcagcggcttgtaaaagcagctaaagatggaactaaagatggtctgcaaaaaaccaaa
gccgcggtgagaaagggacgatctttcatccgcaccaaatctctctgttatgagaagaaa
cccagctgttttgatgaagagtcagatctgttcatcgaggtggagtgttttaatgttgac
ccagtgctgagacccgcacctgatgggctttctcaacaccaggtgatgaggagatgcatt
ctggagatgattctagagagtgagaagaactatctggaagctctgaagaggattttagag
caatatgagaaaccactggcagagattgagcctcggttactgagcgaccgcaagcttaag
gtggtgttttatcggattcgggagatcttgcagtgccatgccctgttccagatggcgctg
gccagtcgtgtgtctgactgggacgagctggagatgatcggagatgtgtttgtagcgtcg
ttttctaagtctatggtgttggacgcttacagtgagtatgtgaataacttcagcttggcg
atgggagtggtgcggaaggcgtgtgcatctaagccctgtttcctcgacttcctcaagcac
cgtcaggagactaacaaagaccatctgaccctctatggactgatgatgaagcctattcaa
cggttccctcagtttatactgctgctgcaagacatgttaaaaaacacaccagtgggccat
cccgatcgtcttccgcttcagatggctctcactgaactggaaacgcttgccgaaaaatta
aacgagaggaaaagagaggccgaccagcgctgtgagatcagacacattgctaaggctatg
aatgaacattacctcaacaagctgctaagcagcggcagtcgttatctgatttgttctgat
gacgtggtggaaacagtttataatgatcgtggggagatcattaagactaaagaacgcaga
gtctttcttctgaatgatgttctcatgtgtgccacccccaaccagcgcccctctcaggat
ggtgtgagtgtgggagctggaggtgaaggtgttcccacaggacagcgcttcctgctcaag
tggagtgtgcctttgagttttgtggaggtcgtggagtttggctccagcgaagagatgggc
gactccagatttccccctttgcactcaggagataaagtcgtcatcaatgctaaacctaat
aagttgtatatgggtccagggcagctgtaccaggacctacagaacctgatccatgacctg
ggtttggtgaaccagatctctaccatgatcagcagtctgaaggggaactatcagaatgtt
aatgggacagttgctcaggattgggtttcaggtctccagcgactcattttaaagaaagag
gaggagattcgtgcagctgatcgctgtaggatacaactacagttaccagggaagcaagac
aagtacggtagacccacgttcttcactgcggtctttaacactttcagtccatccatcaag
caagcttggatcagtaatctgcagatggctaaattggctctacaggaagacaacatccaa
ggctggttttgtgctgaagatgatggtaatcaaatgaggaagcagaaccatcctctctta
ctcagacagatggctgtggtcatgtccaaactacaggagttcaaggtggagtgtgcagtt
cacaacccagagcctcacgtgaacactgacagcactgcggatctgcctgttatgggtcat
ggatgtgtgtgggtggccagctgcaccaatcacatgggtcaggtctccattgtggcgttg
cagaactcaaatcccaaagtgacagagtgttttaatgtggagtcgcgtattctctgcatg
acgtttgtgcctctggatgagcccgtggaaaacgtagagggaaagcctgaggatcggaaa
gccaatgacacaccgactgtgtgcttgggcatggaggaaggcagtatatctgtgtataag
agcagccaacgcgctaaaaaagttcgtctgcagcacttcttctcccctgataagtccagc
gtcacgtgtctagtgtacaagagtgggtgtctgtatgcaggcctggtcagcggttctctg
gtcgtctactccagggcagatgacggttcctgggtcgagtcaggggcccgtgtgctgaag
ttgggagtgttgccggttaaagccctgctggtggtgggtgaacacgtctgggcctcatct
ggagggcagatcttcatcatcagcacacagacacacactgtggagcatcagtttgaagcc
catcaagaagagggaatgatcgtgtcccatatggtggtggccggtgtggggatctggata
tcctttagcagtggctccactctccgactcttccacactgaaactctcgaccacctgcaa
gacatcaacattaccacagccgtcaacaacatactcgcaggacagcagagagtctctgtg
agcagtctgttagtcagtcacggtctgctgttagtggggacaaatctcggggtcacagtg
gccctctctgtgcccagactacagggcatcccaaaagttacaggtcgaggaatggtctct
tttcatgctcaccatggcccagtcaagttcctcaccatggcaacagcagtgtgtaatgtc
tcccaagcaaccatggcaactcttacctccagcacacccagccaatgccagcctggggcc
caggaggtgcagggaacccaactcgacgaaaactgctctgggctgagctctccctcacat
gctccagttctccaggactccctgtcctcctcatgtgggtctctggctctgtctcagggc
tctttagagcacgggccagaagacggggcgatatatgacctgctgaacgagccagcacac
ttccagaaggccaagcagactgagagagcgaatgtgagctcattgttggtggtgtctgga
gggctgggacaccgcagaatcaacagaaaaacaaaacagtctaagcatgaggagatggtg
tccaccattatggtgtggcaaataccactgcccaacctgtga
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