Rhinichthys klamathensis goyatoka (western speckled dace): 130097565
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Entry
130097565 CDS
T09701
Symbol
chrna2b
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2 isoform X1
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130097565 (chrna2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130097565 (chrna2b)
Ion channels [BR:
rkg04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
130097565 (chrna2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
130097565
NCBI-ProteinID:
XP_056120437
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All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MMERFEKPRFFLRITLLFTILCESISCCERTHSHAEDDLFKKLFDGYNKWSRPVPNTSDV
VIVKFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWKPSDYDNVTSIRVPSELIWVP
DIVLYNNADGEFAVTHMTKAHLFHTGKVRWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGS
WTYDKAKIDLERTENTVDLKDYWESGEWAIINAVGTYNTKKYDCCHEIYPDITYFFIIRR
LPLFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSL
VIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPSTHKMPHWVHSVFLDLIPRWLFMRRP
APDSRRRQKLLLLQRQGQGMTSRVLGPANSTLSTSTSWFRGENSGEESRRRYCYKDLELG
TLSSAISLSLQTASPCPLGSTPPTLQNFGPSPRLEMGVASRQPSGRATVTKRPDNLIADK
PGFPLSPSVLQALEGVHYIADHLRAEDADFSVKEDWKYVAMVIDRIFLWMFIIVCLLGTI
GLFLPPWLAGMI
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgatggagcgctttgagaagccgcggttcttcctgcggattactcttctcttcactatc
ctatgtgagtcaatttcttgttgtgagaggactcactcacatgctgaagatgatctcttc
aaaaagctctttgatggctacaacaagtggtcaaggcctgtaccaaacacctctgatgtt
gtcatcgtcaagttcggtttatctatcgcccagctgattgatgtggatgagaagaatcag
atgatgacaacaaatgtctggctaaagcaggagtggaatgactataaactacgctggaag
ccttcagactatgacaatgtgacttctatcagggttccgtctgaacttatctgggtcccg
gatatagtcttgtacaacaatgcagacggggagtttgcagtgacccacatgaccaaagcc
cacctcttccacacaggtaaagtgcgctgggttccacctgccatctacaagagctcatgc
agcatcgatgtcaccttcttcccctttgaccagcagaactgcaagatgaaattcggctcg
tggacttacgacaaagccaagatcgacctggagcgcaccgagaacacggtggacttgaaa
gattactgggagagcggcgagtgggccatcatcaatgctgttggcacctacaacaccaag
aagtatgactgctgccatgagatctacccagacattacctacttcttcatcattcgccgt
ctcccgctcttctacaccatcaacctcatcattccctgcctgctcatctcctgcctaact
gtgctggttttctacctcccgtcagactgcggtgagaagatcacactgtgtatctcagtc
ctcctctcgctcactgtcttcctgctgctcatcacagaaatcatcccgtccacctcgctc
gtgatcccgctcatcggcgaatatctgctcttcactatgatcttcgtcaccctgtccatc
gttatcaccgtcttcgtgcttaacgtccatcaccgctcgcccagcactcataagatgccc
cattgggttcactcggtcttcttggatttgatcccacggtggctgtttatgcgcagacct
gcaccggacagccgtcgcaggcagaaactcctcctcctgcagcggcagggccaaggaatg
acgtcccgggtgcttggaccggcaaactcaaccctcagtacgtctactagctggttcaga
ggggagaactctggggaggagtcccgcaggcgctactgttataaggacttagaactgggg
acgctctcctccgcgatctcactgtcactccaaactgcttcgccctgccctcttggctca
actccacctactctacagaatttcggtccttcccctagactggagatgggcgtggcttcc
aggcagcccagtggaagagctactgtcacgaagcggcctgacaacctgatagcagacaag
ccagggtttcctctgtcccccagtgtcctgcaagctctggagggggtccactacatagca
gaccacctgagagcagaagacgctgactttagtgtaaaagaggactggaagtatgttgct
atggtaatagacagaatcttcttatggatgttcatcatagtgtgtttgctgggcacaatc
gggctgtttctcccgccctggctcgcaggcatgatctag
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