Rhinichthys klamathensis goyatoka (western speckled dace): 130097624
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Entry
130097624 CDS
T09701
Symbol
dmd
Name
(RefSeq) dystrophin isoform X1
KO
K10366
dystrophin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130097624 (dmd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rkg04812
]
130097624 (dmd)
Cytoskeleton proteins [BR:
rkg04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130097624 (dmd)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
EF-hand_2
EF-hand_3
ZZ
Spectrin_SYNE1
WW
CH
Motif
Other DBs
NCBI-GeneID:
130097624
NCBI-ProteinID:
XP_056120519
LinkDB
All DBs
Position
Unknown
AA seq
2507 aa
AA seq
DB search
MAEVDVFLNEEWPALGDAEALEKQLEQCTALVNDIHTVQPSLNGINEVGLALKKEAETPF
AIKIQKMLDELNAQWELICKQAYAKKSALKGGLDMTVSLRKEMQEMQEWITQAEEEYLER
DFQYKTPEELFKAVEELKRAQEEVHQKETKVKLLTDKVTNFISKAPPVAHDALKAELDVL
TSNYQRLCSRLDGKCKTLEEVWACWCELLSYLELENAWMDLLEKKIDETESLQGGVEELE
EALTSLDTMIREHPEYNRNQIRELAQTLMDGRVLDELLHKKVEDYNTRWDELMQRALQRR
QQLEKSLQWAQENDKTLRLIQDSLNTTDRHLTAYIADGIDAAQIPQEAQKIQTELNGHEM
TLDDMKKKAIEVDASEKVIGEIDATYDKLFQVKGKFRLFQKPANFDQRLRECERVLEEVK
VKLGVLSIRSVEQEVVQSQLEQCMKLYKNLSEVKSEVETVIKTGRQIVQKQQTEQPKELD
DRLTALKLAYNVLGSQVTEGKQELEKILKLLRKFRKEVNSLTEWLATTDEELTRRSSVEG
MPSDLDAELAWAKATQEDTERHKPQLKLVRELAQTLKGLLRSQENLIDDKVSLLNCNWIA
VTSRSEQWLNLLLDYQSQMKTLEQNISQINTWMDRAEETLDEMDSQGCIEHVIKGLRIEL
EEMKGKVEAVQVLAEDLIKNTGEHCKAQVKPKLEQLNQRFDIVAKRILMGQASSQELDEY
HRQANIWLQVLDEEIKLGESLKEDDFLEDAGIDEDALNEVFLKGESLLKRTPSGDKKEAV
REKHNLLHDKYDTLKNLRALRKKKALALAPQWYQFCKKTDDMMQWLDKIEKTLAELPDPP
EETRVKAVGSEIEHQRPKLEDLRGLGRVLSEGGAGKLVEPRLLPVNKRWAGLDVKFNQVR
HKSELQFLLQCIADNEALLNSPERWSAAFINVSQQEKCLKEVKVNLDKLESPVTEALGRG
ASLPEESLLVQLLRANWENLKKLYHDRLTRLEKSKKFSEELKALDDWLTYAERTIMKYEQ
DHINNRDHLKELQGEFEKQEAAVKGLNALGTDLTPQCSKDDRDHIKQQLASINSRWAKVS
NQLAEIKRRSAGAKIVLAELNEDMGEFQSWLDAADAVASLPVEAGHKEQLSATLEKVKAR
VVELPSRKQTLHQINSKGSSLPADKVKPLEKHLKVINMQWAKVSTDLPEKQRQIEDLLRD
LSLYQGQLSKLSIWASTTKNQLEQSPTAVDPKIEDDVKEKKPAVEAILAKERPPCQPEKG
QFDGLSADWTSIQVLLKEWRNKCQLAVVTLTGSAAGDAALDKFNKSWTELDDWLTLLDHM
VQTQRVMVGDLDEINDMTVKLKSTLQDMEQRCPQLNKQITAAQNLKNKTNNPETRATITE
RIEKLQAHWEDSHTKLMDRVLQLQNMYKDSSDWLEARKRVEPLIKKANEKLESGKKISHS
VDDLKGQNADVKQLSKDIQQWQAHVNVTNELANKLLTLYADDDTSKVKQMTESMNLAWAN
INKRVGDKEADLEAGLRQLQHFYLDLEKFLNWLTEAETTANVLQDATFKEGLLENPATVR
HLFGQWQDLQAEIDAHGEMYHSLDENGQRIVSSLEGTDNAVVLQKRLDDMGQRWHELCNK
VMSIRPYLDTGVDQWKHLHMSLQELLNWLQLKREELEQQKPVGGDVPTVHQQLLTHKVFR
RELGAKEPVINGTLDNAKTFLAEMPREGLKQRPGQKDVSPEERVQNVGRILRKEVEDVTV
RWKNLGAAAIDWQQQLELAMERLMELQDAQDQLDFKLRQAETVKNSWKPVGELLVDDLQN
HIDRVKVFQEEIAPIQDNVNQVNQLASTFRPPDIQLSPDNLSRIDDLNMRWRLLQVSIEE
HLTQLTTAYRDLGPQTQNFLHASVESPLERSISPNNVPYYINHQTQTTCWDHPKMAELYQ
SLADLNNVRFSAYRTAMKLRRMQKALCLDLLGMSAACEAFEQHNLKQNEQFMDIMQVINC
LTSIYDRLEQQHSSLVNVPLCVDMCLNWLLNVYDTGRAGKIRTLSFKTGIICLCKAHLED
KYRFLFREVASATGFCDQRRLGLLLHDAIQIPRQLGEVASFGGSNIEPSVRSCFQFANNK
PELEASVFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNICKECPIIGFRYRSLKHFN
YDICQSCFFSGRVAKGHKMQYPMVEYCTPTTSGEDVRDFAKVLKNKFRTKRYFAKHPRMG
YLPVQTILEGDNMETPVTLINFWPVDHPPSSSPQLSHDDTHSRIEHYASRDDEHLLIQHY
CQSLNQGSPLSQPQSPAQILISMESEEKGELERVLSDLEQENRKLQSEYDRLKKAHDHKG
LSPLPSPPQMLPASPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLKRLRQ
LLEQPQTESKVNGTALSSPSTASPRSDTSLASLRVAASQTTETMGDDELSSPSQDASTGL
EDVIEQLNNSFPHSQGPSVGSLFHMVDNIGHAMESLVNVITEEQDLD
NT seq
7524 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggtcgatgttttcctgaatgaggaatggccagctcttggagacgcagaggca
ttggagaaacagttggaacagtgcacggctctggtgaatgacatccacaccgtccaacca
agtctgaacgggatcaatgaggtgggactggccttgaagaaggaagctgagacaccgttt
gccatcaaaatacagaagatgcttgatgagctcaatgctcagtgggagctcatttgcaaa
caggcttatgcaaagaaatcagccctgaaaggagggctggacatgacggtgagtttgagg
aaggagatgcaggaaatgcaggagtggatcactcaggcggaggaagagtacctggaacga
gacttccagtacaaaacaccagaggagctttttaaggctgtggaagagctgaagcgggct
caagaggaagtccatcaaaaggaaacaaaggtgaagctactgacggataaagtcaccaat
ttcatttcaaaggctcctcccgtggcccacgatgccctgaaggcagaattggatgttttg
acttctaactaccagcgactgtgcagccgactcgatggaaaatgcaagactttagaggag
gtgtgggcatgctggtgtgagttgctatcttatttggagttggagaatgcctggatggac
ctactggagaagaaaattgatgaaacagaaagccttcaaggaggtgtagaggaattagaa
gaagctttgacttccttagacacaatgattagagagcatcctgaatataaccgcaaccag
atccgtgaattagcccagaccctaatggatggcagagtcctcgatgagctcttacacaaa
aaagtggaggactacaacacacgctgggatgaactaatgcaaagggctttacaaagacga
cagcagctggagaagagcctgcagtgggcccaggagaacgacaaaaccctacgccttatt
caggactctctgaacaccacagaccgacatttgactgcttacatagcagatggcatagat
gctgcacagattcctcaggaggcacagaaaattcagactgagttgaatggtcatgagatg
actcttgatgacatgaagaaaaaggctattgaggttgacgcatcagagaaagtgattgga
gaaattgatgcaacatatgataaactatttcaagtgaaaggcaagttccggcttttccaa
aagccagccaactttgatcagcggttgagggaatgtgagcgagtgctagaggaggtgaaa
gtgaagctgggagtgctgagtattcggagtgtggagcaggaggttgtacagtcacagttg
gagcagtgcatgaagctctataagaatctgagtgaagtaaaatcggaggtggagacggtg
ataaagacgggaagacagattgtgcagaagcagcagacagagcaacccaaggagttagac
gacaggctgacggctctcaaacttgcatacaatgttttgggttcgcaggtaacagaagga
aagcaggaactggagaagattttaaagttattaaggaagtttaggaaggaggtcaacagt
ctgacagaatggctggcaactactgatgaggaactgacgcgccggtcttcggtggaaggg
atgccaagcgatttggatgcagagttggcttgggccaaggcgacgcaggaagacactgag
cgtcataagccacagctgaaactagtgagggagttggcacaaaccctgaagggtttactt
cgtagccaggagaacctgattgatgacaaggtcagtctgctcaactgcaactggatcgcg
gtgacgtcacggagcgagcagtggctaaacctcctgctggattatcagagtcaaatgaaa
acacttgagcagaacatttctcagatcaacacctggatggatcgtgctgaagaaacgctg
gacgagatggacagccagggctgcattgagcacgtcattaagggtttgcggatagagctg
gaggagatgaaggggaaggttgaagcggtgcaggttctggcggaggaccttataaagaac
acaggggaacactgtaaagctcaggtgaaaccgaagctagaacagctcaaccagcgcttt
gacatcgtcgcaaagaggattttaatgggacaggcctcctctcaagagttagacgagtac
cacagacaggctaatatatggctccaggtgctggacgaggagattaaattaggtgaaagt
ctaaaagaggacgatttcttggaggatgcgggcatagatgaggatgcgctaaatgaagtt
ttcttaaaaggagaaagtctcctcaagagaaccccttctggggacaaaaaagaggccgtc
cgtgagaaacacaaccttcttcatgacaaatatgacactctaaagaatctgagagccctg
agaaagaagaaggcccttgctcttgccccgcagtggtatcagttctgtaagaaaaccgat
gacatgatgcagtggctggacaaaattgagaagacccttgcagagcttccagatccccca
gaggagacgagagtgaaagcagttggttctgagattgaacatcaacgtccaaagttggag
gacttgcgtggactgggccgagtgctttcagagggcggagctggcaagctagtggagccc
cgcctcctcccggtcaataaacgctgggcagggctggacgttaaattcaatcaagtgcgc
cacaaaagtgagctgcagtttttgctgcagtgtatcgctgacaacgaggctctgctgaac
tctcctgagcgctggtctgcagcattcatcaacgtttctcaacaagaaaagtgccttaag
gaggttaaagtgaatctggacaaactggagagtccagtgacagaggctttgggcagggga
gcctctcttcctgaggagagtttactggtccaactgcttcgagccaactgggaaaacctt
aaaaagctctatcatgacagactcacacgccttgaaaaatcgaagaaattcagcgaagag
ctcaaagcgcttgacgattggctcacatatgctgagaggacgattatgaagtatgaacaa
gaccacattaataatagagaccacctcaaggagctccagggagagtttgagaaacaggaa
gcagcagtgaaggggctcaatgctcttgggacagatctgactccacagtgcagtaaggac
gacagggaccacattaaacagcagctcgcctctatcaactcccgctgggccaaagtgtcc
aaccagcttgctgaaatcaagagacggtctgccggggcaaaaattgttcttgccgagtta
aatgaagacatgggggagtttcagtcctggctggatgctgcagatgctgtagcttcactt
cctgtagaagcaggtcacaaggagcagctcagtgcaacattagaaaaagtgaaggcccgg
gtggtggaactgccgagcagaaagcaaactcttcatcagatcaacagcaagggctcatct
ctcccagctgataaagtcaaaccattggagaaacatttgaaggttattaacatgcaatgg
gccaaggtgtccactgatcttcctgagaagcagcgacaaatcgaggatctcctgagggat
ttgtctttgtaccagggacagctctccaagctctcaatttgggcttccactactaagaat
cagcttgagcagtcccctactgcagtagacccaaagattgaggatgatgtaaaggaaaag
aaaccagcagtggaagccattttggcaaaggagagacctccatgtcaaccagaaaagggg
cagtttgatggcctcagtgcagattggacatccattcaagttctccttaaagagtggcga
aacaaatgtcagctcgcagtcgtaacattgactggtagtgcagcaggagatgcagccctt
gataaattcaataaatcctggacggagcttgatgattggctcactcttttggatcacatg
gttcagactcagagagtaatggtaggagatcttgacgagatcaacgacatgacggtgaaa
ctcaagtcaacactgcaagacatggagcaaagatgcccacagctgaacaaacaaatcact
gcggcgcagaacctgaagaacaaaaccaataaccctgagacacgggcaaccattacagag
cgcattgaaaaattacaggcacattgggaggattcccacaccaagctgatggaccgggtc
cttcagctgcagaacatgtataaggactccagtgattggttggaggctagaaaaagggtg
gagcccctcattaagaaagccaatgaaaaactagaaagcgggaagaaaatttcgcacagt
gttgatgatttaaaaggccaaaatgcagatgtcaagcaactttctaaggacatacagcag
tggcaagctcacgtaaatgtcaccaatgaactggcaaacaaactattgaccctgtatgca
gatgacgacacaagcaaagttaaacaaatgactgagagcatgaatctggcttgggccaac
atcaataagcgtgtaggggacaaggaggcagatctggaagctggactacggcaattgcag
catttctacttggacctggaaaaattccttaattggctcactgaggcagaaaccacagcc
aatgtcttacaagatgccacatttaaggagggactcctggaaaaccctgccacagtgcgg
catttattcgggcaatggcaggatctccaagcagagattgatgcgcacggggagatgtac
cattcattagatgaaaacggacagcgtattgtgtcatccctggaggggacggacaatgct
gtggtgctacaaaagcggcttgatgacatggggcagcggtggcatgagttgtgtaacaaa
gttatgagtataaggccgtatctggatacaggtgtggatcagtggaaacacttgcacatg
tccttacaagagctgctcaactggctgcagttgaagagggaggagctagaacagcagaaa
ccagtagggggcgacgtgccgaccgtgcaccaacaactccttacgcacaaggtcttcaga
agagagttgggtgccaaagaacctgtaatcaatggaacactcgacaatgctaaaaccttc
cttgccgagatgcctcgtgagggtctgaaacagaggcctggacaaaaggatgtaagtcct
gaggagagggttcaaaatgtgggccgcatattgcgtaaagaagtggaggatgtaacggtg
cgctggaagaatctgggtgcagctgctattgactggcagcaacagctggaattggccatg
gagaggctgatggagctgcaggacgcccaggatcagctggacttcaagctacggcaggct
gagactgtgaagaattcttggaagcctgttggggagctgcttgtagatgatttgcaaaac
cacatagacagagtaaaggtgttccaggaggagatagctcccattcaggataatgtaaat
caggtcaaccaactggcctccacatttagaccacctgacattcagctctctccagacaac
ctgagcagaatcgatgacctcaacatgagatggaggcttctgcaggtctccattgaggag
catctgacccagctgaccacagcctacagggacttggggccccagactcagaatttcctg
catgcgtctgttgaaagccctcttgaacgctctatttcgcccaacaatgtcccctactat
atcaatcaccagacccaaacaacatgttgggaccacccaaagatggcagaactgtaccag
tcattagcggatctcaacaacgtacgattctcagcatacaggacggcaatgaagctcaga
cgaatgcagaaagctctctgcttggatcttctgggcatgtctgcagcctgtgaggccttt
gagcagcacaatctgaaacagaatgagcaattcatggacatcatgcaggtgatcaactgt
ctgaccagcatctacgaccgcctggagcagcagcacagcagcctggtcaacgtgcctctc
tgcgtggacatgtgtctcaactggctgctcaacgtttatgatacaggacgagctggcaag
attcgtaccctatccttcaaaacaggaataatttgtttgtgcaaagctcaccttgaagat
aagtacagatttttattcagagaggtggccagtgccacaggcttctgtgaccaacggcgc
ctcggcctcctcctgcacgacgccattcagatccccaggcagctgggtgaggtggcatct
ttcggagggagcaatatcgagcccagtgtgcgcagctgctttcagtttgccaataacaaa
ccagagctagaagcttcagttttcttggactggatgcgtttagaacctcagtcgatggtt
tggcttcctgtccttcaccgtgtggcggccgctgagacagcaaagcaccaggctaaatgc
aacatttgtaaggaatgtcctattattggcttcaggtaccgaagtttaaagcactttaac
tatgatatctgccaaagctgcttcttttctggcagagtggccaaaggtcacaagatgcag
taccctatggttgaatattgcacaccgacgacgtcaggagaggacgtgagagactttgct
aaggtgttgaagaacaagtttaggacgaagcgctattttgccaagcatcctcgcatgggt
tacctccctgtccaaaccatccttgaaggagacaacatggagactcctgttacactgatc
aacttctggcctgttgaccatccgccgtcatcttccccacaactctcccatgacgacacc
cactcacgcatcgagcattacgctagcagggatgatgagcatctgctgatccagcattac
tgccagagtctgaatcaaggctctccactcagccagccgcagagccccgctcagatcctc
atctcaatggagtctgaagagaagggagagcttgagagagttctcagcgatctggagcag
gagaacaggaagctgcagtcagagtacgatcgtctgaagaaggcacacgaccacaagggg
ctgtcgccgctgccctcacccccacagatgctgccggcctcgccccagagtccacgggac
gcagaactgatcgcggaggccaaactactgcggcagcacaagggacgtttggaagcaaga
atgcaaatcctggaggatcacaacaaacagctggaatcacagctcaaacgccttagacag
ttacttgagcagccacagactgagtccaaggtgaatggtactgccctgtcctcaccctcc
actgcctctccgagatctgacaccagcctggcctcactgcgtgtggccgcaagccaaacc
acagagaccatgggtgatgatgagctgtccagtccctcccaggatgcaagcactggatta
gaggacgtcatcgagcagctcaacaattccttccctcacagccaaggtcctagtgtggga
agtcttttccacatggttgataacattggacacgccatggagtcgttggttaatgtaata
accgaggagcaggatttagactga
DBGET
integrated database retrieval system
