Rhinichthys klamathensis goyatoka (western speckled dace): 130097746
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Entry
130097746 CDS
T09701
Symbol
rabgef1l
Name
(RefSeq) RAB guanine nucleotide exchange factor (GEF) 1, like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
130097746 (rabgef1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rkg04131
]
130097746 (rabgef1l)
Membrane trafficking [BR:
rkg04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130097746 (rabgef1l)
Protein recycling
Other Rab GTPase associated proteins
130097746 (rabgef1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Xpo1
Motif
Other DBs
NCBI-GeneID:
130097746
NCBI-ProteinID:
XP_056120665
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MNSQHRRGFSVQQSDLMCKSGCGYYGNAVWQGHCSKCWREQNQCTRAKQIEEDRALAERL
QREEEAAAYASSQEGAPAQPASSRTHTVPMVKRLFTPAPKTPARRDAGSAQTPASHSSSL
GRESDHVTQTFIDFLKTLQRPPGYDIFKQCHAFTENIARRKAVVCDDLSESVQDFYQNMS
EYLQTNFKGSPEVMETVMEEVERFVMGRLYEQLFCPEHSDDEKKDLVIRKRIRALHWVSI
AMLCVPLDEQIPKVSDSVERAITDLIDLDSRKVPKEKLACVTRCSKLILTAVQGSVKAAA
SADDFLPALVYIVLKANPPRLHSNIQYITRYCNPSRIMSGEDGYYFTNLCCAVAFIEKLD
AQSLNLSQDDFELYMSGSASPSGPRASSSGHSSQNGSASSTSAPPAGERRPEEADLIEWS
EGQELSVMGILDAAPVRTHASASSTIDSDNIGGDSLPPPLQPQRFAS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaactctcagcaccgcaggggcttcagcgtccagcagtcggacctcatgtgtaagagc
gggtgcggttactatggtaacgccgtctggcagggccactgctccaaatgctggcgcgag
cagaaccagtgtacgagagccaagcagatcgaggaggaccgggcgctggccgagaggtta
cagagagaggaggaagcagcagcgtacgccagcagccaggagggggcgccagcacagccc
gcgtcctccaggacacacaccgttcccatggtgaagaggctcttcacacccgctcccaaa
acacccgcacggagagacgcaggatccgcacagacgcccgcgagccacagctcgtccctc
ggccgagagtcagaccacgtcacgcagaccttcatcgacttcctcaagaccttgcagaga
cctcctggatatgacatcttcaagcagtgccatgccttcacggagaacatcgcacgcaga
aaggctgtggtttgtgacgatctctcagaatctgtgcaggatttctatcaaaacatgtct
gaatacctacagaccaactttaaaggctctccagaagtgatggagactgtgatggaggag
gtggagcgctttgtgatgggccgcctgtatgagcagctcttctgccccgagcactcagac
gacgagaagaaggacctggtcatccgcaagagaatcagggctttgcactgggtgtccatt
gcgatgctgtgtgtcccattggacgagcagatccctaaagtatcggacagtgtggagaga
gccataacagacctgatcgacttggactcgaggaaggttcccaaggagaagctggcgtgc
gtcacccggtgtagtaaactcatcctgacggccgtccagggcagtgtgaaagctgccgcc
tccgcggacgactttctgcccgcgctcgtctacatcgtgctgaaggccaacccgccccga
ctgcactccaacatccagtacatcacccgctactgcaaccccagccgcatcatgagcgga
gaggacggctactacttcactaacctgtgctgtgccgtggcgttcatcgagaagctcgac
gcgcagtcgctgaacctgagccaggacgactttgagctctacatgtctggttctgcgtct
ccatcgggtcccagggcctcctcgtctggccacagctcacagaacggctccgcgagcagc
acgagcgccccgccggcaggggaacgcaggccggaggaggccgacctcatcgagtggagc
gaaggccaggagctgtctgtaatgggcattttggacgcggctcctgtccggacacacgcc
tctgcctcctccaccatcgactcggacaacatcggtggcgatagccttcctcctccgctg
cagccgcagaggttcgccagctag
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