Rhinichthys klamathensis goyatoka (western speckled dace): 130099296
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Entry
130099296 CDS
T09701
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130099296 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rkg03400
]
130099296 (neil1)
Enzymes [BR:
rkg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
130099296 (neil1)
DNA repair and recombination proteins [BR:
rkg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
130099296 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
MoaC
Motif
Other DBs
NCBI-GeneID:
130099296
NCBI-ProteinID:
XP_056120882
LinkDB
All DBs
Position
Unknown
AA seq
446 aa
AA seq
DB search
MPEGPELHLASLFVNRMCAGLVFTGAVEKSEVNKNPEVPFCCDAYIIKAQSRGKEVILTL
TPFKNDGDRKRKVGKHQSQHPMDVVFRFGMSGFFRFTSEDDLPKHAHLRFYTNESPRRVL
SFEDTRRFGSWQANGTWQKDRGPCVMFEYESFRENVLSNLSDKAFDKPICEALLNQKYFN
GIGNYLRAEILFRLQIPPFVKARTVLEGIELKIEDKKEIKKVITVLETTDTAGKKGVKVE
TPDLLSLCHTVPLEVVKLGENGYKPAKAEYSVLQAWMQCYSVDGMNSLTDHNGRTIWFKG
DPGPMVPKGAKSRKNKWKIQKDHDYTDSKKAKKTHAESIAIEKPAKKKDNIKVKKESATS
KAQSGTKRQNKDTKRVSTEPADENKKSKKQGKRSLKVPPRTGTNKIKGQHEEELIKTKRN
SVTCRASATKAKPKRRSSGTRRGRSR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgccggagggtcctgagcttcatttggctagcctgtttgtcaacaggatgtgtgcaggg
cttgtgtttactggagccgtagagaaatctgaagtgaacaaaaatcctgaggtcccattc
tgctgcgacgcctacatcatcaaagcccagtccagaggaaaagaggtcatactcacactt
acaccctttaaaaatgatggtgaccgcaaacgcaaggtcggtaaacatcagtctcagcat
ccgatggatgtggttttccgatttgggatgtccgggtttttccgcttcacttcagaagac
gatcttccaaaacatgcccacctgcggttctacactaatgagagcccacgcagggttctg
agttttgaggacacgcgcagattcggcagctggcaagcaaatgggacatggcaaaaagat
agagggccttgcgtcatgtttgagtacgagagcttcagggagaatgttctttcgaatctg
tctgacaaggcatttgacaaacccatctgtgaggctctcttaaatcagaagtatttcaac
gggattgggaactatcttcgagcagagattttgttcagactacaaatccccccatttgtg
aaggcacggacagttctagagggaattgagctgaaaattgaggataaaaaggagatcaaa
aaggttattacagttttagagacaacagatactgctggaaagaagggggtgaaggttgag
accccagacctcctttctttgtgtcacactgttcccttggaggtggtgaaattgggcgaa
aatggctataaaccagcaaaggctgaatattctgtgctacaagcctggatgcagtgttac
tctgtggatggaatgaactcattaactgaccacaatggacggacaatttggttcaaaggg
gatcctggtcctatggtgcccaaaggtgccaaatctcgcaaaaataagtggaaaatacag
aaagatcacgattatactgattcaaagaaagccaaaaagactcacgccgagagcattgca
atagaaaagcctgccaagaaaaaggacaacataaaggtaaagaaagaaagtgcaacctct
aaagcacaaagtggaacaaaaaggcagaacaaagacacaaagagggtcagtacagaacct
gcagatgagaacaaaaagtcgaaaaaacaagggaagagaagcttaaaagttcctccaagg
actggaactaacaaaatcaaaggccaacatgaggaggaactgattaaaactaaaaggaat
tctgtcacctgcagggcgagtgcaacaaaagcaaagccaaagaggagaagtagtggcaca
cgacgaggccgttcaagatga
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