Rhinichthys klamathensis goyatoka (western speckled dace): 130099355
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Entry
130099355 CDS
T09701
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04510
Focal adhesion
rkg04512
ECM-receptor interaction
rkg04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130099355 (lamb4)
04518 Integrin signaling
130099355 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130099355 (lamb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMB1
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
130099355
NCBI-ProteinID:
XP_056120996
LinkDB
All DBs
Position
Unknown
AA seq
1823 aa
AA seq
DB search
MQIRLETSVFLLLLVAAPVRLQDECVGNSCYPNLGDLMVGRAAQLTASSTCGLYRPQNYC
ILGYLENERKCFTCDSRSPYNLPRNPNSHHIENIITTFQPERKMRWWQSENGVHEVSIQL
DLESMFQFSHLILTFKSFRPAAMLVERSKDFGRTWKVFRYFAEDCANSFPGVSEEPADSI
DDLICDSRYSGAEPSTDGEVVLKALDPSFDIHDPYDSTIQELITLTNLRVNFTRLITLGD
TLLTRRRRNPQEKYYYALYEMVVRGSCFCNGHASQCIPVDGTRGDTFSEPGMVHGRCVCQ
HNTVGYNCELCQDFYHDAPWRPGGKTDSDVCRRCNCHGHSEKCHFDLARFLATGGVSGGV
CDDCRNNRVGSQCELCGPYYYQDPQRSVDDPNACIPCECDPDGSVDRGVCDPVTGQCVCK
QNVEGERCDRCKFGFYGFNRDDPSGCQLCRCNFMGTIRTDNPCDQTTGRCICEHFAYGPQ
CDQCLPGYWGLGNTVYGCLPCDCDVGGALRTECSSVDGQCECRPNMVGHKCSDPAPGYSL
APLDFYIYEAENAVPLVANSPFIQAPTEQIPERPAKLPLCPLAPKPSPIPNKEPETQTVK
PSSTPYNPHVTLPICEHYFRERGYDFKISNGRVVVYKPEIRKRRRRRQGQRTIPFEPGSP
LQIILRERVSDRSVTWTGPGFVRVQDGTGLRFTVSNIPATLDYYVVVRYEPEFTDDWTAI
VNVVPLGSGDGRCQYDPSDKVFTLSGSGRTASLDLPVCLSDGNKHHLDVTFRNQHIAGPQ
TSSYILIDSLGLIPKVDSPPNFCSQSYLSQFQQYRCIELGAQAGEQTLSEVCEKHIGSMS
AFIHNGAVACNCHQVGAFSSSCSKFGGQCQCKPNVIGRCCDSCAPVTYGLGPNGCSSCDC
DPSGSTAELCDQTTGQCPCRDGVTGRRCGKCYPGYYGFPLCRRCKCNGLADICDPITGDC
LDCREHSTGQNCERCKDGYVGDPISGEPCEPCLCPDVDGSGRFFAISCNKDPYSGAPNCE
CLPGYTGLRCDSCAPGYYGDLRLPGGRCDECCCNNNIDPRDGESCDAVTGECLRCLHNTE
GPQCQSCKIGYYGNAFAQDCKECSCDRRGTDDTKCPAGSPCFCDQETGECPCRTGVKGAL
CNECADGYWNLDGESGCEPCNCDPEHALNYVCDKITGQCFCQPEYGGRKCDECGPNHFGN
PDIQCISCDCNMEGTIFPACDTYTGECLCKPGVTGLFCDDCAPGHDTNFPACEPCHACYH
LWEKIVSDVRLDVERIETMMPCPEDYRPPSDLQHLQNLLEKLQSLLNMTAQDELKKLEEL
FARIRNETETIDPNIIVIDPTILLNTDIDNIRLEFNRLLKNLGEKAKEVPVTDVKANDIL
NKIKKLYDEFTDSVKKVEAAKKIQEASRKTRENATLELAKCRIGEMDKLERKVKALSVAN
LNEEVCGAPGDVECEKAKCGGALCGTCGGPACTGSLPISLNASKLADVTEKNITALRSKL
KEDDAKLMNTSKMTNYIKDQAEELMNKMNQTKNKYEKEKIDTKNLIEKLKNYLRDEMVRP
EDIEKLANAVLSIQLPKSPNEIKDMIENIKKILANITDFNDDLEHLEKQAKIAENLKERA
KEILNRTEAIDVREIEEALNDTEELNDKIVNDLDEAEENNVVISGKVKETEPKLKNIEDN
LDSTQAKKLLDEIQALKNKTEMNRAQGKEAKDAANAALASANDVNKDLEELKEQFEKLKL
NSTNQNVNEEANERLKNITMEAETLAKYVEDKMKKIEDLEKRILVATAKKEERMKDLEAL
QNEADNLKNFIVDKVEKYGLCST
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atgcagatccgattggagacatcggtgttcctgcttctcttggtagcagctccagtccgc
ctccaggacgaatgtgtggggaattcgtgttatcctaacctcggtgacctcatggtgggc
cgtgccgcccaactcactgcttcttcaacctgtggcctctacagaccacaaaactattgt
atcttgggatacctggagaatgagcgcaagtgcttcacctgtgactccaggagcccctac
aatctcccccgcaatcccaacagccaccacatagagaacatcatcaccaccttccagccc
gaacgcaagatgaggtggtggcagtctgagaatggtgtgcatgaagtcagcattcagttg
gatctggaatcaatgtttcagtttagtcatttgatattgacattcaagagtttccgacct
gctgccatgttggtcgagaggtcaaaagacttcgggagaacctggaaggttttccgttac
tttgcggaggactgtgccaactcattccccggcgtctctgaggagccagcagacagtatt
gatgacctcatctgtgacagtcgctactctggggcagagccatccaccgatggagaggtg
gtgttaaaagctttggatccaagttttgacatccatgacccatacgactctactatacaa
gaactgatcaccctgactaacctgcgagtaaactttacccgtttgatcaccctgggcgac
acgttgctcacgcgacggaggaggaacccacaggagaagtattattatgccctctatgag
atggtcgttcgggggagctgcttctgcaatggccacgccagtcagtgcattcccgtggac
ggcacacgtggagacaccttcagtgagcctggcatggtgcacggtagatgtgtttgccaa
cacaacaccgtagggtacaactgtgagctctgtcaagacttctaccatgacgccccctgg
aggccagggggaaaaacagactcagatgtttgcagaagatgtaactgtcatggccattca
gagaagtgtcactttgacctagcacgctttctggccactggcggggtcagtggtggtgtg
tgtgatgactgcagaaataaccgtgtaggatctcagtgtgagctgtgtgggccgtattac
taccaggaccctcaacgctctgtggacgaccccaacgcctgtataccttgtgaatgtgat
cctgatggctcagtggaccgtggtgtgtgtgatccagtgactggccagtgtgtgtgtaaa
cagaacgttgaaggagagcgctgtgaccgctgcaagtttgggttctacgggttcaaccgg
gacgaccctagcggctgtcagttgtgcaggtgtaatttcatgggaacgatacgcacggac
aacccttgtgatcagaccacaggaaggtgtatttgtgagcactttgcttacggcccacag
tgtgaccagtgtctgccaggttactggggcctaggaaacacagtctatggctgcttaccc
tgcgactgtgacgttggaggggccctgagaaccgaatgttcctctgtggatggccagtgt
gaatgcaggcctaacatggtgggccacaaatgtagtgatccagcccctggatattccctg
gctcctcttgatttctatatctatgaggctgagaacgcagtgcctctggtggcaaattct
ccatttattcaggccccaacagaacagatacctgaacgaccagccaaactccctctatgt
ccccttgctccaaaaccctccccaatacctaataaagaacctgaaacccaaacggtgaag
ccatcttcgaccccatacaacccccatgtcaccctgcccatctgtgagcactacttcaga
gagaggggttatgacttcaagatcagtaatggaagggttgtggtgtacaaacctgagata
cggaaaagacgaagacgaagacaaggccagaggacaatcccctttgaaccaggctcacct
ctacagatcatcctgcgagaacgtgtctcagatcggtctgtcacttggactggaccaggt
tttgtgcgagttcaggatgggacaggactcagatttactgtcagcaatataccagcaact
cttgattactatgtagttgtccgctatgaaccagagttcaccgatgattggacagctatt
gtgaatgttgtcccacttggatcaggggatggacgttgtcagtatgacccatccgacaaa
gtgtttactctttcaggctctggaaggacagccagtctggatcttccagtgtgcctcagt
gatggtaataaacaccatttggacgtcacttttagaaaccagcacatagcaggccctcag
accagctcatacatcctgattgactctctgggcctcattcccaaagtggactccccccca
aacttctgttcgcagtcatatttatctcagtttcagcaataccgctgtattgagttggga
gcacaggcaggagagcaaaccctctctgaagtatgtgagaagcatattggaagcatgtct
gcctttattcacaatggtgcagtggcttgcaactgtcatcaagttggagcgtttagctca
tcatgcagtaaattcggtggacagtgtcaatgcaaacctaatgttattggccgttgctgc
gattcctgtgctcctgtgacgtacgggcttggacccaatggctgctcatcatgtgactgt
gatccatctggctctaccgctgaactgtgtgaccagacaactggccagtgcccgtgtcga
gatggagtaactggccgtcgatgtggtaaatgttaccctggttactatgggtttcccctg
tgcagacgatgcaaatgcaacgggttggctgacatatgtgaccccatcactggagactgt
ttggactgcagggaacactccacgggacaaaactgtgaaaggtgtaaagatggttatgtt
ggtgaccccatctctggggagccatgtgagccatgcttatgtccagatgtagatggaagt
ggacgtttctttgccatttcctgcaacaaggatccatactctggagctccaaactgtgaa
tgtctgcctggatatacaggcctacgctgtgactcctgcgctcctggttattacggtgac
ctgaggttgccaggtggccgatgcgatgagtgctgttgcaacaataacattgatccccga
gatggggaatcatgtgatgctgtgactggcgagtgtttgcgctgcttacacaacacagaa
gggccgcaatgtcagagctgcaaaattggatactatggcaatgcattcgctcaagactgc
aaagagtgttcttgtgaccggagaggcacagatgacacaaagtgtccagctggaagcccc
tgtttctgtgaccaggaaaccggcgagtgcccatgtcgaacaggtgtgaaaggagccctt
tgtaatgagtgtgcggatggatactggaacctggatggggagtctgggtgcgagccctgc
aactgtgacccagaacatgctctcaactatgtctgtgacaagatcacaggccagtgtttc
tgccagccagagtatggaggcagaaaatgtgatgagtgtgggccgaatcactttggaaac
ccagatatacagtgcatatcttgtgactgtaacatggagggcaccatttttccagcttgt
gacacttacacgggtgagtgtttgtgtaagccaggggtgacgggccttttctgtgatgac
tgtgccccgggtcacgacaccaacttccctgcctgtgaaccctgccatgcctgctaccac
ctctgggagaaaatcgtctcagacgttagactagatgttgagaggatagaaactatgatg
ccttgccctgaagactaccggcctccatctgatctacaacacttacagaatttgttggag
aagttgcagagcctccttaacatgaccgctcaggatgagctaaaaaaactagaagagctc
ttcgcacgcattaggaatgaaacggagaccattgacccaaacataatcgttattgatcca
accatacttctcaacactgacatcgacaacatccgccttgagttcaataggctgttgaag
aatctcggagagaaggcaaaagaggttccagtgacagatgtaaaagctaatgatattttg
aataagatcaaaaagctctacgacgaattcactgacagcgtgaagaaagtggaagcggct
aaaaagatccaagaagcctccaggaagacaagagagaatgccacattggaacttgctaag
tgtcgcataggagaaatggataagctggaaaggaaagtgaaagctctgagcgttgccaac
ctcaacgaggaggtctgtggcgctccaggtgatgtagaatgtgagaaagcaaaatgtggt
ggagctttgtgcgggacgtgcggggggccggcatgtacagggagtttacccatcagcctc
aatgcctccaaactggcagatgtgaccgagaagaacatcactgctctgcgcagtaaactc
aaagaagatgatgctaagctcatgaacacctcaaaaatgactaattacatcaaagatcaa
gcagaggagctgatgaataaaatgaatcagactaagaacaaatatgagaaggaaaagatt
gacaccaagaacctcatagagaagctcaagaactacctaagagatgagatggtgaggcca
gaagacattgagaaactggccaatgctgtgttgtccattcagctgcccaagtcccctaat
gagatcaaggacatgattgagaacatcaagaagattctggcaaacatcacagacttcaac
gatgatctagagcacttagaaaaacaagccaaaattgcagaaaacctgaaggagcgggcc
aaagaaatcttgaacagaaccgaggcaattgatgtgagggagatagaggaagcactgaat
gatacagaagagctcaatgacaagatagtcaatgatctggacgaggctgaagaaaacaat
gttgttatcagtggcaaagttaaagagactgaacctaaactgaaaaacattgaggataat
ttggattcgactcaagccaaaaagttactggatgaaatccaggccttgaagaataagaca
gagatgaacagagctcaggggaaggaggccaaagatgctgccaatgcagctctcgccagt
gccaacgatgtcaacaaagatcttgaggaactgaaagagcagtttgaaaaattaaaactg
aatagcacaaaccagaatgttaatgaagaggctaatgaacgtctaaagaacatcacaatg
gaggcagaaacgctggctaaatatgtggaagataaaatgaagaaaattgaagacttggag
aaaaggattctggttgcaactgcaaaaaaagaggaaaggatgaaagatttggaggcactc
cagaacgaggcagataatttgaagaactttattgttgacaaagtggaaaaatatggtctg
tgctccacttaa
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integrated database retrieval system
