Rhinichthys klamathensis goyatoka (western speckled dace): 130099424
Help
Entry
130099424 CDS
T09701
Symbol
toporsa
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130099424 (toporsa)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130099424 (toporsa)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rkg03037
]
130099424 (toporsa)
Enzymes [BR:
rkg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130099424 (toporsa)
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130099424 (toporsa)
UBL E3 ligases
130099424 (toporsa)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
130099424 (toporsa)
Cilium and associated proteins [BR:
rkg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
130099424 (toporsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
Rad50_zn_hook
PWI
Motif
Other DBs
NCBI-GeneID:
130099424
NCBI-ProteinID:
XP_056121099
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MASPQMKEHPSGVVLNTISKAASPESKCPICLDHFKNISYLDVCLHKFCFCCIHEWSKNK
AECPLCKQPFNSIYHTIKSEDNYKRFDLRPTENGSFGNMAGQRFRYRTTLTGDRRPAQRR
TSPPPDHGVIFEGLRGSLPQRHSRDLHSMIRRLAVRQRRESEGRSVQSLHEQEVIKFRRA
LYRRGVRVQSVQDGGRTRETSAEFFKRNPACLHRLVPWLRRELTVLYGTHGSLVNIVQHI
IMTLITRQNLDDQAVLHELRPFLLSHTEHFLHEFLSFAQSPFNMEAYDQRAVYDLPRPSG
QSSSSETSVIAISEDESDSLVSGAQDYATPRVTLSQTAWDDETPGPSYSSELSQVLPFHV
RDSDSDSSVGEAVVSVAAVPHQDRPGNTATIAVEEEDSSGSDEDCVIISYVKPVAERTPE
LVQLSSDSEHSDQNEEPQDPQAPQHIRFTSESDLSPTVTQRPSRRPTRSSRSPDDTSTHL
RKEDKYGKRNHERELSGSREGSSHSNRTHSSSCSRNHPVSKESKHNRNQGKDTSRHTSSY
WHSYSHYSQQGSDRSCYTETCSSYTSYYRSVYNRPHSLSHSRRRSMDREDRSSSRSTSRI
KSGSSSGQERRHSRSNSKINSSNRRHRSHYESHSRINSSNRRDKSRSRSSSRIKSSSSNC
QDRNHSRSNSRINSSNRQERSRSRSNSRINSSNRQERSRSRSNSRINSSNHQERSRSRSN
SRINSNSSHQISLHDEYGRKRKYKTKHYEEPSRKSPSNFFTDSAEDGAKKKNKKHHKRCK
RKSESPSVDDKSEGHSRKHHKKKKKKHKKSKRHNSEGRVGKHSPVLITINSDSDNADSSE
PSTSNICGASSTFTTANSSTKTETQPLKSSFLDMEQQSTAGTEYSSVGDAGNQLKTD
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccacaaatgaaggagcacccatcaggtgttgtgttaaacacaatatcaaaa
gcagcatctccggaatcaaagtgcccaatatgcctggatcactttaaaaacatatcatat
cttgatgtgtgcctacataagttttgcttctgctgcattcatgagtggtcaaagaacaaa
gcagaatgccccttatgcaagcagccatttaattcaatctaccacaccattaaatctgaa
gataactacaagaggtttgacctgcgaccaactgagaatggctcatttggcaacatggca
gggcaaagattcaggtatcgcaccacacttacaggtgaccgcagaccagcacagaggaga
acatctcccccacctgaccatggtgtcatatttgagggcctgagaggatctcttccacag
cggcacagcagagatctccatagcatgataaggaggctggcagtaaggcaaagaagagag
agtgagggcaggtctgtacaaagtcttcatgaacaagaagtgattaaattcagacgagcc
ttgtacagaagaggtgtgcgagtccaaagcgtgcaggatggtggccgtaccagggagacc
tccgcagagttctttaaaagaaatcctgcttgtctccacaggcttgtaccttggttgcga
cgagagctgactgttctgtacggtacccatggttcccttgtcaatatagtgcagcacatc
atcatgactctgatcactcgacaaaacttggacgaccaggctgttctacatgagcttcgg
cccttcttgctgtcccacactgagcacttcctgcatgagtttctcagctttgctcaatcc
ccgttcaacatggaggcatatgaccagcgtgctgtttatgacttgcctcggccctccgga
cagagtagcagttcagaaacatctgtgattgccatctctgaggatgaaagtgattcttta
gtgtcaggagcccaggattatgccactcctagggtgactttaagccaaaccgcatgggat
gatgagaccccagggccatcctactcttcagagctatctcaggtattacctttccatgtg
agggactcagactctgatagtagtgttggggaagcagtggtgtctgttgctgcagtgcca
catcaggaccgtccagggaatactgccactattgcagtggaagaagaggactcctctggc
agtgatgaagactgtgttattatcagctatgttaagccagtggcagaaaggacaccagaa
ctggtccagctttcttctgactctgaacattctgatcagaatgaagagccgcaagaccct
caggcaccccaacatattcgttttacttcagagtcggatttgtcacccactgtaactcag
agaccctcgaggaggccaacaaggtcctctcgctcacctgatgacacctctacacatctt
agaaaagaagataaatatggtaaaaggaatcatgaaagggagttgtcaggatctagagaa
ggatcctcacacagcaacaggacacactcttcctcttgtagcaggaatcacccagtgtct
aaagagagcaagcataaccggaaccaaggaaaggacacaagtcgccacacctctagttat
tggcattcatatagccattatagtcagcaaggcagtgacaggagttgttatacagagaca
tgctcatcctacaccagctactacagaagtgtatataatcgacctcattctctatcacac
agcagaaggcgaagcatggatcgtgaggacagaagtagctcaaggagcacttctagaatc
aagtccggctcctccagcggtcaggaaagaagacactcaaggagcaattccaaaatcaac
tcttcaaatcgtcggcacagaagtcattatgagagccattctagaatcaactcctccaac
cgtcgggacaaaagtcgctcaaggagcagttctagaatcaagtccagttcctccaactgt
caggacagaaatcactcaagaagcaattctcgaatcaactcctccaaccgtcaggaaaga
agtcgctcaaggagcaattctcgaatcaactcctccaaccgtcaggaaagaagtcgctca
aggagcaattctcgaatcaactcctccaaccatcaggaaagaagtcgctcaaggagcaat
tctagaatcaactccaactcctcacatcagatatcactgcatgatgaatatggcagaaaa
aggaagtacaaaacaaagcattatgaggaaccctcaaggaagagtcctagtaattttttc
acagattctgctgaagatggtgcaaaaaagaaaaacaagaagcatcacaaaaggtgcaag
aggaaaagtgagagtccaagcgtagatgacaaatctgagggtcatagtaggaaacatcac
aagaagaagaaaaagaaacataagaagagcaagagacataatagtgaggggagggtggga
aagcacagccctgttctcattacaattaatagtgacagtgacaatgctgactccagtgaa
ccctcaaccagtaatatctgcggagctagctccacttttacaacagcaaacagttctaca
aaaactgaaactcagccgctcaagtccagtttcctagacatggagcaacagtcaactgct
ggaactgaatatagttcagtgggtgatgctgggaatcaactcaagactgattaa
DBGET
integrated database retrieval system
