Rhinichthys klamathensis goyatoka (western speckled dace): 130099536
Help
Entry
130099536 CDS
T09701
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b isoform X1
KO
K14966
host cell factor 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03083
Polycomb repressive complex
rkg04980
Cobalamin transport and metabolism
rkg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130099536 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
130099536 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130099536 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rkg01009
]
130099536 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130099536 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
rkg03029
]
130099536 (hcfc1b)
Protein phosphatases and associated proteins [BR:
rkg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130099536 (hcfc1b)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
130099536 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
130099536 (hcfc1b)
MLL-HCF complex
130099536 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
130099536 (hcfc1b)
Mitochondrial biogenesis [BR:
rkg03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
130099536 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
130099536
NCBI-ProteinID:
XP_056121226
LinkDB
All DBs
Position
Unknown
AA seq
2069 aa
AA seq
DB search
MASSGTSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTAT
NQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSSDLYELQASRWEWKRLKPK
APKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRPGSNVAG
WDMPITYGVLPPPRESHTAVVYTEKTSKKSRLIIYGGMSGCRLGDLWTLDIDTLTWNKPA
ISGVAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMSW
ETILMDSLEDNIPRARAGHCSVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYLETDRPQP
PSRVQLVRANTNSLEVSWGAVPTADTYLLQLQKYDIPAATAATSPTVNPIQSLPINSPRS
PVAATAAPAAQSMPLSGVTLVPQVPSPTTAMPTSPLAASPRGPAILKVAAPHSTPGTSVV
TVRQATPGGKSPVTVTSLPAGVRMVVPAQSTQGTPIGSSPQMSGMAALAAAAAATQKIPP
SSTVLNVPAGATIMKTVNVTPGSTTLPATVKVASPVMVTNPATRMLKTAAAQVGTSSIST
PNTPNRPIITVHKSGTVTVAQQTQVVTTMVGGVTKTITLVKSPITMGSSGALISSLGKMM
SVVQTKPVQTSAVTGQAGGSPVTLIQTKTPLPAGTILKLVTSADGKPTTIITTSQAGGAG
TKPTILGISSVSPNTANKPGTTIIKTIPMSAIQQGATGVTSSTGMKSPITYITTKVVTPG
TGTPGKFITAVPKLTAGAGQQGVTQVVLKGAPGQPGTILRTLPMGGVRLVSPGTVSAGKP
TVTTLVVKGTTGVTTLGTVTGTVSTSAAGVNVASANASLATPVTTLASIATLSNQVINPT
AITVSAAQTSHATATIQSAPQPTQVTLITTPSGAEAQPAQDLPVSILASPTSDQPSTTGA
DAGDGAGDGATTVTLVCSNPPCETHETGTTNTATTASAKMGTGQICSNPPCEMHETGTTN
TATTASANMGRAQQVCTNPPSETHDTGTTNTATTASCNMGSQKMGTVNSKTDPASSASSS
ASGSEQETPATEGGAGAMRQETLRTGTTNTSTTARSNMGSDQTGTVQSSNKSQASISSTM
VPVCSSPSSETQETDTTNTSAESGDVQQVCSKPPCETHETGTTDTAAQSSSSMESGQTNV
VERVCSDPPCETHETGTTNTPTQASSTMGAGQSGTVQKVSSNPPCETHETGTTNTPTQAS
STMGAGQSGTVQKVSSNPPCETHETGTTNTPTQASSTMGAGQSGTVQKVCSNPPCETHET
GTTNTPTQASSNMGAGQSGTVQKVCSNPPCETHETGTTNTPTQASSNMGAGQSGTVQKVC
SNPPCETHETGTTNTPTQASSNMGAGQSGTVQKVCSNPPCETHETGTTNTPTQASSSIGA
GQTGAVQMVCSNPPCETHETGTTNTATTSTSSLETGEGTAQQGGDGPSDSGTSSEPTSST
EPANPTTQSRAITTVTQATPTPGPSVPEISSMAGSAVVAEVPGEAEAMEQTSAEAVAAGE
EPMQTECQGELSEEGAIRVVAIESAAGDEGTMLQVHVAMEAQPGQGDQAEQMEAGVDAAE
AMSLAAQDSEALALPQELMSAEGQQTTLMVTGLTPEELAVTAAAEAAAQAAATEEAQALA
IQAVLQAAQQAVLSAGDAGHDGHQSTTIPIVLTQQELAALVQQQQQLQEAQAAAAQQLSA
EAAAAALPTEGLAPADSLNDPASESNGHEMATAVTRAVASLLPRTSAETLAPSSTFAPSQ
TILVASPAKMQAANALAEVANGIESAAGKQEAPPAVVRPPVKKENQWFDVGFVKVTNMVV
THYYVPADDSAVTDDDSGTIPDYSRMKKIELSPGTAYKFRVAGVNACGRGTFSEVSAFKT
CLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQTVEAKASTPAQL
AFMRVYCGPNPSCLVQTSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETSKD
GSAAKPAAKRPVSSPDMKGTGPKKARSDQ
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcaggcacctcggttctgcagccgcgctggaagagggttttgggctggtct
ggcccggttcctcgcccgagacacggacaccgagctgtggccattaaagagctgatggtt
gtgttcggcggagggaatgaagggattgtggatgagctgcacgtctataatacagccacc
aatcagtggtttattcctgctgtcaggggtgacattcctcccggctgcgctgcatatgga
tttgtgtgtgacggcaccagactccttgtgtttgggggcatggttgagtacggaaaatac
agcagcgatctttatgaactacaggccagtagatgggagtggaaacgtttaaagcccaaa
gcccccaaaaatggcccaccaccatgccctcgcctgggacacagcttttctctagttgga
aacaaatgctacttgtttggtggactggcaaatgacagtgaagatcccaaaaacaatatt
cccagatacctgaatgacctctacacactcgaactacgcccggggtcaaacgtagcaggc
tgggacatgcctattacgtacggtgtgcttccccctcctcgcgagagccacactgctgtc
gtctacacagagaaaacgtccaaaaagtctcgtctcatcatctacggcggcatgagtggc
tgccgtcttggagacctctggactttagacatagatactttaacctggaacaaacctgcc
ataagtggagtggcacctttgccccgcagtctccactctgccaccactataaccaacaag
atgtttgtgtttggtggatgggtccctctggttatggatgatgtcaaagtagccacacac
gagaaggagtggaagtgcactaacactttggcctgcttaaatctagactcaatgtcttgg
gaaacaatcttgatggactctctcgaggataatatcccacgggccagagctggacactgc
tctgttgctattaacaataggctgtacgtctggagtggaagggacggctatcgcaaagcc
tggaacaaccaagtttgctgcaaagatctgtggtatttggagacagatcgtcctcaaccc
ccatcacgtgttcagctggtccgtgccaacactaactctctggaggtgagctggggggca
gtgcctaccgctgacacttacctgctgcagctacagaaatacgacatccctgctgcaaca
gctgccacatcgccaacagtcaaccccatccagtcgttacccatcaactcgcctaggagt
ccggtggccgccactgctgctcctgcagctcagagcatgcccctctctggggtcacactg
gtgccacaagtcccttcccccacaaccgccatgccaaccagcccgcttgcagcctcacct
cgtggaccagctattcttaaagtggcagcgcctcattcgacccccgggacgtcagtcgtt
actgtgcgtcaggccactcctggaggaaaatccccagtcacggttacatcacttcctgca
ggcgtccgcatggttgtccccgcacagagcacccaggggacgccaattggcagcagccct
cagatgagtggcatggctgctttggctgcagctgcagccgccacacagaagatcccgccc
tcttccactgtgctaaatgttccagctggagccaccatcatgaaaaccgtcaatgttact
cctggatccacaactctgccagctactgtcaaagtagcttcacctgtaatggttactaat
cccgcgacccgaatgctaaaaacagctgcagcccaggtcggcacttcctctatctctact
cccaacaccccgaatcgaccaatcatcactgtgcacaaatcaggcacagtaaccgtagcc
cagcagacccaggttgttaccaccatggtcggaggagtcaccaaaactataaccctagtt
aagagccccatcacaatgggtagcagcggtgctctgatctccagccttgggaagatgatg
tctgttgtccaaaccaaaccagtacaaacatctgcggtcaccggacaggctggaggcagt
cctgtcactctaattcaaactaagactcctctgcctgctggtaccatcctgaaactggtc
acatctgctgatggcaagcccaccacaatcattacaacttcccaggcaggaggggctggc
accaaacctactatcctgggcatcagcagtgtctctccaaataccgccaacaaaccaggc
accaccattattaaaacaattcctatgtctgctatacaacaaggagcaacaggtgtgact
agcagtactggcatgaagtcacccatcacgtatatcaccactaaggttgttactcctggc
acgggtactccggggaaattcataacagctgtgcctaagctaacagcaggtgcaggacaa
cagggggtcacacaggtggtcctgaagggggcaccaggacagcccggcactatcctgcgc
actttgcctatgggcggagtgcgtctggtttcaccaggcactgtgtctgccggcaaacca
acagttaccacactggtcgtcaaaggcaccacgggagtcacaactctgggtacagtaact
ggtactgtatcaactagtgcggcaggggtcaatgtggcaagtgctaatgccagcctggct
actcctgtcaccacacttgcctccatcgccacattgtccaaccaggtgatcaatcccacg
gccatcactgtatctgctgcccagaccagccacgccaccgctacaatacaatcggcaccc
cagcctactcaagtaaccctgatcacaactccaagtggtgctgaagcccagcctgcacag
gatcttcctgtctccatcctggcctctcccacctcagatcagccctccaccactggtgct
gatgctggtgacggcgctggcgacggtgctaccaccgtgacactggtctgctccaaccca
ccatgtgagacccatgagactggtacaaccaacacggctacaacggcttctgccaaaatg
ggcaccggacagatttgttccaaccctccgtgtgagatgcatgaaacgggcaccaccaac
acagcaaccaccgcctctgcgaatatgggcagggcacagcaggtctgcaccaatccaccc
tcagagacacatgatacgggcaccaccaacacagccactactgccagctgcaacatgggc
tctcaaaagatgggcaccgtgaacagcaagacggatcctgcttcgtcagcttcatcctca
gcttctggttcagaacaagaaacgcccgccacagagggcggtgctggcgccatgcgacag
gagactctccgcacgggtaccaccaacacctctactaccgcccgctccaacatgggctct
gaccagacgggaacggtgcagagctccaacaagagccaagcttccatctcctctactatg
gttcctgtttgctccagcccttcaagtgaaacgcaagagacggacaccacaaacacttca
gctgagtctggtgacgtccagcaggtctgctcaaaaccaccctgtgagacacatgaaaca
gggacgactgatactgctgcacagtcaagctccagtatggaaagtgggcaaaccaatgtt
gtggagagggtgtgctccgatccaccctgtgaaacacacgaaacgggcaccaccaacacg
ccgacccaggcctcatctactatgggtgcaggacagagtggcaccgtgcaaaaagtgtcc
tccaatcctccctgtgaaacacacgaaacgggcactaccaacacaccgactcaggcctca
tctactatgggtgcaggacagagtggcaccgtgcaaaaagtgtcctccaatcctccctgt
gaaacacacgaaacgggcactaccaacacaccgactcaggcctcatctactatgggtgca
ggacagagtggcaccgtgcaaaaagtgtgttccaatcctccctgtgaaacacacgaaacg
ggcactaccaacacaccgacccaggcctcgtctaatatgggtgcaggacagagtggcacc
gtgcaaaaagtgtgttccaatcctccctgtgaaacacacgaaacgggcactaccaacaca
ccgacccaggcctcatctaatatgggtgcaggacagagtgggaccgtgcaaaaagtgtgt
tccaatcctccctgtgaaacacacgaaacgggcaccaccaacacaccgacccaggcctcg
tctaatatgggtgcaggacagagtgggaccgtgcaaaaagtgtgttccaatcctccctgt
gaaacacacgaaacgggcactaccaacacaccgacccaggcctcgtcttctattggtgca
ggacaaactggcgctgtccaaatggtgtgttccaatcctccctgtgaaacacacgaaacg
ggcactaccaacacagccaccacttctacaagcagcttagaaactggagaaggaacagcc
cagcagggtggtgatggaccgagtgacagcggcaccagctcagaacccacgtcatctaca
gaaccagccaatcccacaacacaaagcagagccatcaccacagtaacacaggccacgccc
actccaggaccatcagtaccggagatttcgtctatggccggatctgcggtagtggctgag
gtcccgggagaggcggaggccatggagcagaccagcgcagaggccgtagcagcgggagaa
gagcccatgcagaccgagtgtcagggagagctgagtgaagagggagccatcagggtcgtt
gccatagaaagtgcagcgggtgatgagggcaccatgctacaggttcatgttgcaatggaa
gcacagccaggtcaaggagatcaggctgagcagatggaggccggtgtggatgctgcagaa
gcgatgagtctagctgctcaagactccgaagcactcgctcttccccaggagctgatgtct
gcagaaggacagcaaactaccctcatggtgactggactgaccccagaggagctggctgtg
acggcagcggctgaggctgcggcacaggctgcggcaacagaagaagcgcaggccctcgcc
atccaggctgtcctacaggcggctcagcaggctgtgctcagtgcgggagacgcaggtcat
gatgggcaccagtccaccaccatccctatagttttgacccagcaggaactcgctgctcta
gttcagcaacagcagcagctccaggaggcgcaggcggctgcagcccagcagttgagtgct
gaagcagctgcagctgcgctgcctaccgaaggcttggcaccagcagacagcctcaacgac
cctgcgtctgagagtaatggccatgagatggcaaccgctgttactagagctgtggccagt
ctccttccacgcacttctgcagagactctagccccatcaagtacttttgcaccatctcag
acgattttggtcgccagccctgccaagatgcaagcagccaatgctttagctgaggtggcc
aatgggattgaatcagctgctgggaaacaagaagcgcctccagcagtcgtgaggcctcca
gtgaagaaagagaatcagtggtttgatgttggtttcgttaaggtcacaaacatggttgtc
actcactattatgtgccagctgacgattcagcagttactgatgatgattctggcacaatc
ccagactacagccgaatgaagaagatcgaactgtctccaggcactgcgtacaagtttcgc
gtggccggtgtcaatgcgtgcggccgcggaacattctctgaggtctctgcgtttaaaacc
tgcttacctggcttccctggagcaccgtgtgccatcaaaatcagcaagagccccgatggt
gcccacctgacctgggagcctccatcagtaacatcagggaagatcattgagtattcagtg
tatctggccatccagagctcgcagacggtcgaggcgaaagcatctactccggctcagctt
gcctttatgcgggtgtactgtggtcccaacccgtcctgcctagtgcagacatctagtctc
tccaacgcccacatcgattacaccaccaaacccgccatcatcttccgcatcgccgcccgc
aatgagaagggctacggccccgccacgcaagtcaggtggctacaagaaaccagtaaagat
ggctctgcggccaaacctgcagcaaagaggccggtctcgtcacctgatatgaaaggcact
ggtccaaagaaggccagatctgaccagtga
DBGET
integrated database retrieval system
