Rhinichthys klamathensis goyatoka (western speckled dace): 130099537
Help
Entry
130099537 CDS
T09701
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1 isoform X1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130099537 (fgd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
130099537 (fgd1)
Domain-containing proteins not elsewhere classified [BR:
rkg04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
130099537 (fgd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
FYVE_2
RHG20_PH
zf-RING_5
IBR
Motif
Other DBs
NCBI-GeneID:
130099537
NCBI-ProteinID:
XP_056121228
LinkDB
All DBs
Position
Unknown
AA seq
995 aa
AA seq
DB search
MQLNRPKSAHLISSSPHNSSSYSNQFKSMRFSYHISSGLSSPQPALRRTGLSTSSPRLLT
KSLSLEPGPCLGAHETPQHLCSDPGPLEPQHCNGTTENGPQDVPPPPPKTRPPLPGPKPQ
VPPKPPHLQQQGARRPRPPDKPLPPPPCRPLPADPRQSRATLPRAEGSSSPTCVLSLIEK
FEREQIIVVPDITGGVMCTPRVPDQQAAPGSFSPPPSEFILPCTSLQEPLEAPLAEEEVE
KVEKEEEDEVDETEEDDSELGASCSEKRLSMESGYGASDKLLDNMEMRDLTANQSEIPSE
RLSLPPSQMDGKLANRDSGIDSISSPSHSEELCFVGDEDRVGHEREICPCSPGPGLPCAY
VEGPGGEGASGVEGGRDSEGDSDMEEGSGDESEMNPMALQPLPKAERQDSSELSFQQRVF
NIANELLHTEKAYVSRLHLLDQVFCAQLMEEARARSSFPCEVVMGIFSNICSIYCFHQQF
LLPALEKRMEEWDLNPRIGDILQKLAPFLKMYGEYVKNFDRAMELVNTWMQRSSQFKAII
HNIQKEEMCGNLTLQHHMLEPVQRIPRYELLLKDYLHRLPEDADDFKDAQKSLELIATAA
EHSNAAIRKMERMRKLLKVYELLGGEEDIVNPTNELIKEGHILKLSAKNGTSQDRYLILF
NDRLLYCVPKLRLIGQKFGVRARIDVDGMELKETSSMNVPRTFLVSGKQRSLELQARTEE
EKRDWIQAIQATIQRHEQTLETFRMLNCSFREEDFTPPNSPNCTELGKRAPTPIREKEVT
LCMKCQEPFNSITKRRHHCKACGHVVCGKCSEFRARLLYDNNRANRVCIDCYTMLVGVPP
SPASLSNSTQRRRSILEKQASVAAENSVLCSFLHHMEKGSGRGWQKAWFVIPENEPLVLY
IYGAPQDVKAQRSIPLIGFEVSLPESSDRLERRFAFKMSQSHLTVYFSADCEEMQRRWME
VLSRAGRGEELQSNGPISEALEEEGEETVPTGEST
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgaatcgacccaagagcgcgcatctcatcagctccagtccgcacaattcatcc
tcctattccaaccagttcaaaagcatgcgcttctcttaccacatcagcagcggcttatcc
agtccacagccagccctgcgcagaacaggcctgtccacatccagtccgcggctcctaacc
aagagtctgtcccttgagccaggcccctgccttggagcccacgagaccccgcagcacctc
tgctctgaccctggacccctggaaccacagcactgcaatggcacaactgagaacggacct
caggatgtcccgcctccaccccctaagacacgcccacctttacctgggccaaagcctcaa
gtgcccccgaaaccccctcatctacagcagcagggcgctcgccggccacgccccccggac
aagcccctccctcccccgccctgccgcccactccccgctgaccctcgccaatcacgcgcc
actttaccgagagcagagggaagctcctcccccacttgtgtcctctcgctcattgagaag
tttgagagggagcagatcatcgtggttccagatatcaccggcggagtgatgtgtacccca
cgggtcccggaccagcaagccgctcctgggtcatttagccctccaccctcggagttcatc
ctgccctgcacgtcccttcaggaaccactagaggcgccgctggccgaggaggaggtcgag
aaagtagaaaaagaggaggaagacgaggtggacgaaaccgaggaggatgacagtgaactt
ggggcgtcctgctcagaaaagcggctctctatggaatcgggctacggtgcctctgataaa
ctgctggacaatatggagatgagggaccttacagccaaccaatcagaaatcccctcggaa
cgcttgtcactcccaccgtcacagatggatgggaagctggccaatagagacagcggtatt
gacagtatcagctcgccctcacacagtgaggagctgtgctttgttggggatgaggatcgg
gtcggtcacgagagggagatttgcccgtgcagcccagggcccgggcttccttgcgcctat
gtcgaggggcccggaggagagggggccagcggtgtggagggcggcagagactcggaggga
gacagtgatatggaagagggcagcggtgacgagagtgagatgaacccgatggctctacaa
cctctgcctaaagctgaacgacaagactcatctgagctgtcgttccagcagcgggtgttt
aacattgctaatgagcttctgcatacggagaaggcctacgtgtccagactgcacctcctg
gaccaggtgttctgcgcccagctgatggaggaagcccgagctcgcagctccttcccctgt
gaggtggtcatgggcatcttctccaacatctgctccatctactgcttccaccagcagttc
ctgctgcccgcgctggagaaacgcatggaggaatgggatctgaacccccgcatcggggac
atcctgcagaaactggcacctttcctgaagatgtatggcgagtatgtgaaaaactttgac
agggccatggagctagtgaacacctggatgcagcgctcctctcagttcaaagccatcatc
cacaacatccagaaagaggagatgtgtgggaatcttaccctacagcaccacatgttggag
cctgtgcagaggatccctcgttacgagctcctgctcaaagactatctgcaccgcctgcca
gaagacgcggacgacttcaaagacgctcagaaatctctggagctgatcgccacagcggca
gaacattcaaacgctgccatcaggaaaatggagcgcatgagaaagctgttgaaggtgtac
gagttgctcggtggagaagaggacatcgttaacccgactaatgagctcattaaagaggga
cacatcctgaaactgtcagctaaaaatgggacatcacaggatagatacctcattctgttc
aatgaccggttgttgtactgcgtccctaaactgaggctgataggacagaaatttggagtg
agagcgaggattgatgttgacggcatggagctgaaggagaccagcagcatgaacgtacca
cgaacctttctggtatccggaaaacaacgttcgcttgaactgcaagcaaggacggaagaa
gagaagagagattggattcaggcaatccaggccactatacagagacatgaacagacgctc
gagacgttccgtatgctcaactgctcgtttcgggaggaggacttcactcctcccaactct
ccaaattgcacagagcttggaaagagagcgcccactccaatccgggagaaagaggtcaca
ctgtgcatgaagtgtcaggagccttttaactctattaccaaaagacggcatcactgcaaa
gcctgcggacacgtggtgtgtggaaagtgttctgagttccgcgcacgtctgttgtacgat
aacaaccgagccaaccgtgtgtgtatagactgctacaccatgctagtgggagtgccgccc
tctcctgccagtctgagcaacagcacacagagacgtcgctccattctagagaaacaggcc
tcagtggcagctgagaatagtgtgctgtgtagtttcctacatcatatggagaagggaagt
ggccgtggatggcagaaggcctggttcgtcatccctgaaaatgaaccactggtgctgtat
atctatggtgctccacaggatgtcaaagctcagcgcagtattcccctcatcggattcgag
gtgtcactacctgaatcgagtgaccgtctagaacgtcgcttcgccttcaaaatgagccag
agtcatttgaccgtttacttcagtgccgactgtgaggaaatgcagcgacgttggatggag
gttttgtcgagagccggcaggggtgaggagttgcagtcaaatggtccgatttccgaagcc
cttgaagaagaaggggaggagacagtacctacaggagaaagcacatga
DBGET
integrated database retrieval system
