Rhinichthys klamathensis goyatoka (western speckled dace): 130099547
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Entry
130099547 CDS
T09701
Symbol
cxxc1a
Name
(RefSeq) CXXC-type zinc finger protein 1a isoform X1
KO
K14960
COMPASS component SPP1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130099547 (cxxc1a)
03036 Chromosome and associated proteins [BR:
rkg03036
]
130099547 (cxxc1a)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
130099547 (cxxc1a)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
130099547 (cxxc1a)
COMPASS/SET1 complex (yeast)
130099547 (cxxc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
PHD_ash2p_like
NBAS_11th
Gal4_dimer
Motif
Other DBs
NCBI-GeneID:
130099547
NCBI-ProteinID:
XP_056121243
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MDNEVSDFEKHPRPGMSLSRSNTPVYCVCRKPDINCFMIGCESCSEWFHGDCINISEKTA
KTIHVWYCERCRGKNNSLEIKYRPKKSREKESEADGTDNQPDTPDFKSDGRRGSRIKRSA
RMCGECEACMRTEDCGLCDFCKDMKKFGGPNKIRQKCRLRQCEVRARVAPPVNTSSEEKM
MSLKEKMLRVKDEECSMSKGRDYQDGPMSEDYSENELELYQQYCAGQYGEHSTGWNSDDD
DGSYADSALRKRAVKVKHVKRREKRSEKKKEENKPRKHKPKQKHRDRVRHSERPEVRDSG
GARQCLGPGCVEAARASSKYCSDECGMKLAANRIYEILPQRIQQWQQSPCIAEEQGKKLL
ERIRREQQSARLRLTEMEKRFHELEGIIAKAKQQVVQYDEEVNEGDDDTDLQIFCVSCSH
PVNPKVALRHMERCYAKYESQTSFGSMYPTRIDGATRLFCDVYNPQSKTYCKRLQVLCPE
HSRDPKVPADEVCGCPLVRDVFEPTGEYCRVSKRKCNKHYCWEKLRRAEVDLERVRVWYK
LDELFEQERNVRLAMTNRAGLMALMLHQTIQHDPITPDLRTSKDR
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggataacgaagtgtcagactttgaaaaacatcccagacccgggatgagtctaagccgg
agcaacacgcctgtttattgcgtttgtcgcaaaccagacatcaactgcttcatgattggt
tgtgaaagctgcagtgagtggtttcatggagactgcattaatatttctgagaagacggcc
aaaaccatccacgtttggtattgtgaaaggtgtcgaggtaaaaataattccttggagatc
aaataccgtcccaaaaaaagccgggagaaagaatccgaggcagacgggaccgataaccag
cccgacacaccggatttcaaatcagatggacggcgagggtcacggattaagcgctccgct
cgcatgtgtggagaatgtgaagcctgcatgcgcacagaggactgtggactgtgcgacttc
tgtaaagacatgaagaagtttggcggcccaaataagatcaggcagaaatgccgactgagg
cagtgtgaagtgcgggctagggttgccccgccagtaaacacatcatcagaggaaaagatg
atgtcgttgaaagagaaaatgttgcgagtgaaggatgaggagtgctccatgtctaagggc
agagactatcaagacggcccaatgtctgaagactacagtgagaatgagctggagctgtat
cagcagtactgcgctgggcagtatggagagcacagcacgggttggaacagtgatgatgat
gatggttcatatgctgattcggctctgagaaaaagagctgttaaggtcaagcacgtgaaa
agaagagaaaagcgatctgaaaaaaagaaagaggagaataagcctcggaagcacaaaccc
aaacagaagcaccgcgaccgggtgagacacagcgagcggccagaggtgcgagacagtgga
ggagcaagacagtgcctcgggcccggatgtgtcgaagctgcacgcgccagctccaaatac
tgctctgatgagtgcggcatgaagctcgctgccaatcgaatctatgagatcctgccccag
cgtatccagcagtggcagcagagcccgtgcattgcagaagaacagggcaagaaacttctg
gagcgaatccgccgtgagcaacagtcagctcgcttgcgactcactgagatggaaaaacgg
ttccatgagctggagggtatcatcgctaaggccaaacagcaggtcgtacagtacgatgaa
gaggtcaacgagggcgatgacgacactgatttgcaaatcttctgtgtgtcctgcagtcac
ccagttaaccccaaggtggcgctgcgtcacatggaaaggtgctatgccaagtatgagagt
cagacatcatttggctccatgtaccccacacgtatagatggtgctacacggctcttctgt
gatgtttacaatccacagagcaaaacctactgtaagagactgcaggttctctgcccagag
cactccagagaccccaaggtccctgcggacgaggtctgtgggtgtccactggttcgtgat
gtattcgaacccactggagaatactgcagggtgtccaaacgcaagtgtaacaaacactac
tgctgggagaaactccgcagggccgaagtggacctggagcgagtcagagtgtggtacaag
ttggatgaattgtttgagcaggagcgcaatgtaagattagccatgacgaatcgtgcaggt
ctcatggccctcatgctgcaccagacaattcaacacgacccaattaccccagacctgaga
accagcaaggacagataa
DBGET
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