Rhinichthys klamathensis goyatoka (western speckled dace): 130099580
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Entry
130099580 CDS
T09701
Symbol
vsig8b
Name
(RefSeq) V-set and immunoglobulin domain-containing protein 8b
KO
K06788
coxsackievirus and adenovirus receptor
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04514
Cell adhesion molecule (CAM) interaction
rkg04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
130099580 (vsig8b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130099580 (vsig8b)
04517 IgSF CAM signaling
130099580 (vsig8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rkg04515
]
130099580 (vsig8b)
Cell adhesion molecules [BR:
rkg04515
]
Immunoglobulin superfamily
CTX family
130099580 (vsig8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-set
Ig_3
ig
I-set
Ig_2
Ig_C17orf99
SCY_4732_
Tweety
Ig_PDGFR_d4
C1orf162
DUF8570
DUF4719
SIT
Adeno_E3_CR2
WBP-1
TMEM154
EphA2_TM
Epigen_C
Tmemb_9
CLE_plant
Mid2
Motif
Other DBs
NCBI-GeneID:
130099580
NCBI-ProteinID:
XP_056121286
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MSKFWINFPLPLAALYIIAACLNHAALTWAMKVTSTGPLTIKKAQGESLTLGCTYTPFAE
DVGDLDIEWTIVNPDMTQKDELILSYSGGTLHQLGNADLMSRFKFVGDPSLGDATITFST
LKVSDTATYQCKVKKIPGVDSRKVTLVVLVRPSPPKCSLEGSEEKGGTVSLRCKTTQGSS
PLKYAWTKESGNMPPTATQNPLTGELLISNHSESYTGKYFCEVSNEVGAERCTYSLQAYN
PTNKVGVIVGAVIGVLLLLLLLLLLIWLLICCCNKRRYEKEVANEIREDTRAPESRPGSR
TSSFRSVMNYHVHPGIYYSSVKKADVTRAGSGRSSAHTERSRAQREASMLASDHRPQLTY
DSKYGYPV
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagttttggatcaacttccccttaccgctggctgcattatacatcattgcagcg
tgtctaaatcatgcagctcttacgtgggctatgaaggtgacttccactggaccactgaca
atcaagaaagcccagggggagagtcttactttgggctgcacgtacaccccgttcgccgaa
gatgtcggagacctggacattgagtggacaatcgtcaatccagacatgacccagaaagat
gagctgatcttatcctacagcggagggaccctccatcagctaggaaacgcagacctgatg
agtcgcttcaagtttgttggtgacccgagcctcggcgacgccaccatcaccttctccacc
ctcaaggtctcggacacggccacgtaccagtgcaaagtgaagaagatacccggcgtcgac
tccaggaaagtcactttagtggtgctggtacgaccttcgccccctaaatgctcgctggaa
ggtagcgaggagaagggcggaaccgtttcgctccgctgcaaaaccacccagggttcatca
cctctgaaatatgcatggaccaaagaaagtggaaacatgccaccaaccgcaacacagaat
cccctgaccggagagctgctcatctcaaaccacagcgagagctacacggggaagtacttc
tgtgaggtcagcaatgaagtaggagcggagcggtgcacatactcccttcaagcatataac
ccaaccaataaagtgggagtgattgtgggagctgtgattggtgttttgctgttgctgctc
ctcctccttttactgatctggctcctgatttgctgttgcaacaagcggcgctatgaaaaa
gaggtagccaatgagatcagggaggacaccagagctccggagagtcgtccgggaagccgc
acctccagcttccgttctgtaatgaattaccacgtccaccccgggatctattacagctcc
gtaaagaaagccgacgtcacacgggcaggatccggtcgcagcagtgcccacaccgaacgc
agcagagcccaaagggaagccagcatgcttgcgtctgatcacaggcctcagctcacgtac
gacagcaaatacggataccccgtataa
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