Rhinichthys klamathensis goyatoka (western speckled dace): 130099747
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Entry
130099747 CDS
T09701
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rkg03021
]
130099747
03036 Chromosome and associated proteins [BR:
rkg03036
]
130099747
Transcription machinery [BR:
rkg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
130099747
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
130099747
SLIK complex
130099747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
HDA2-3
ResIII
DEAD
DUF1357
Motif
Other DBs
NCBI-GeneID:
130099747
NCBI-ProteinID:
XP_056121523
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MDARSEDESVSNSSGESSNSDDESGSGSGSGSSSSSSSSSSSQSGSSDSGSGSDSGSQSD
SDSEKSKEKNDQGNKIDGAAFWKSNPSILTVQRSAMIRKQQLQQQQQVQQQPSSSNTGSD
EDSSSSDDSDDDSKSRSKGSGSDSGSGSGSGSSDSSEKEEGHSDESVSDYEPSHKVKSRK
PSNKATARNGRNNKAPKKKPSRSSSDEDDDYKKALAGPRRQATVNVSYKEDEELKTDSDD
LVEVCGEDVPPPEEDEFETLERVMESRIGRKGATGAVTTVYAVEADGDPNASFDPNRQPG
EVQYLMKWKNWSHIHNTWETEETLKQQNVKGMKKLDNFKKKEQEKKKWLKAASPEDVEYL
NCQQELMDDLHSQYQIVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWEDGALISRKFQ
KCIDEYMSRNQSKTIPFRDCKVLKQRPRFVPMKKQPLYIGGDGLELRDYQLDSLNWMAHS
WCKGNSCILADEMGLGKTIQTISFLNYMFNDHQLYGPFLLVVPLSTLTSWQREIQLWAPQ
MNVVVYLGDINSRNMIRTHEWMHPQTKRLKLNILLTTYEILLKDKSFLGNVSWAFIGVDE
AHRLKNDDSLLYKTMMEFKSNHRLLITGTPLQNSLKELWSLLHFIMPDKFHSWEMFEEEH
GKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAVQKQYYKWILTRNYK
ALSKGTKGSTSGFLNVMMELKKCCNHCYLIKPPDETEFYNRQEGLQHLIRSSGKLILLDK
LLVRLKERGHRVLIFSQMVRMLDILAEYLKYRQFLFQRLDGSIKGEMRKQALDHFNAEGS
EDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTK
GSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSTPFNKEELSAILKFGAEE
LFKEQEGEEQEPQVC
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggatgcacgcagtgaggatgaaagtgtcagcaacagcagcggagagtccagtaattca
gacgatgagtctgggtcaggatcgggctcgggctcgagttcaagcagtagcagttctagc
agtagccaatcagggagcagtgactcaggaagtggatcggattctggaagccaatcagac
tcggactccgagaaatccaaggaaaagaatgatcaaggcaacaaaatcgatggagcagcg
ttttggaagtccaaccccagtatcctgacagtgcaacggtccgccatgatccggaagcag
cagctccagcaacagcagcaggtccagcagcagccgagctcctcaaacaccggctcagac
gaggactcttccagtagtgatgactcggatgatgactccaagagcaggagtaaagggtct
ggatcggactcgggatcgggttcaggaagtggctcatcggactcttcagaaaaggaggaa
gggcacagtgacgagtcggtgtctgactatgagcccagtcacaaagtcaagagcagaaaa
ccttcaaacaaggccactgccaggaatgggagaaataacaaggctccgaagaagaagccc
tcgcgctcctcctcagatgaagacgacgattataagaaagccctagcggggcctcggcgg
caggccacggtcaacgtgagctacaaagaagatgaggaactgaagacggattccgacgac
ctggtggaggtgtgtggagaggacgtcccgcccccagaggaggacgagttcgagacactg
gagagagtcatggaatcgaggataggtcggaaaggagcaacgggtgccgtaaccacagtg
tatgccgtagaggcagatggagaccccaacgccagcttcgaccccaacagacagccagga
gaggtgcaatacttgatgaaatggaagaactggtcccacattcacaacacctgggagacg
gaggagacgctcaaacaacagaacgtcaagggcatgaagaaactggacaacttcaagaaa
aaagagcaggagaagaagaaatggctcaaagcggcctcgcctgaagatgtggagtactta
aactgccagcaggagctcatggatgacttgcattctcagtatcaaatcgtggaaagaatc
attggacattcgaatcaaaagtctgcggcaggttatcccgactacctttgtaaatggcag
gggctgccgtactcggagtgcagttgggaagacggtgctcttatttctagaaagtttcaa
aagtgcatcgatgaatacatgagccgaaaccagagcaaaaccatccccttcagagactgc
aaggttttaaaacagagaccccggtttgtgcccatgaagaagcagcctctgtacatcggt
ggagacggcctagagctgcgggactatcagttggacagtctcaactggatggcccattct
tggtgcaaaggaaacagttgtatcctggcagatgagatgggtctgggaaaaaccatccag
accatcagcttcctcaactacatgttcaatgatcaccagctttacgggccctttcttctg
gtggtgcctctgtccaccctcacgtcctggcagagggagatccagctctgggcgcctcag
atgaatgttgtggtgtacctgggagacatcaacagcagaaacatgatccggacacatgaa
tggatgcatccgcagaccaagcgactgaagttaaacattctgcttactacatatgaaatt
ctgctgaaggataagtcatttttaggaaatgtcagctgggcgttcataggtgtcgacgag
gcccatcggctgaagaacgatgactctctcctctacaagactatgatggagttcaagtcc
aaccacaggctcctgatcactggcacacccctccagaactcactcaaagagctctggtct
ctgctacactttattatgcctgacaaatttcactcgtgggagatgtttgaagaggagcat
gggaagggcagagactcgggctataccagccttcataaagagctggagcccttcttgctg
cgcagagtgaagaaagatgtggagaaatctttgcctgccaaggtggagcagatcctcagg
gtagagatgagcgctgttcagaaacaatactacaagtggatattgacgaggaactataaa
gccctgagtaaaggaactaaaggaagcacgtcaggcttcctcaacgtcatgatggagttg
aagaaatgctgtaaccactgctacctcattaaaccccctgacgagaccgagttctacaac
agacaagagggcctgcagcaccttattcgcagcagtgggaagctgattcttctggataaa
ctgctggttcggctgaaggaacgagggcaccgtgtgctcatcttctcccagatggttcgg
atgctggacatcctagcggagtacctgaagtaccggcagttcttattccagcgactggat
ggttctataaagggtgagatgaggaagcaggcgttggatcactttaatgcggagggctct
gaggatttctgcttcttgttgtcgacgcgagcgggtggtctgggcattaatctggcctct
gcggatacggtggtcattttcgactccgactggaacccccagaatgacctgcaggcccag
gccagagcgcacaggattgggcagaaaaaacaggtgaatatataccgtctggtgacgaag
ggctcagttgaggaggagatcattgagagagccaagaagaaaatggtgttggaccacctg
gtgattcagaggatggacaccacggggaagacggtcctccatacgggtgctgctccttcc
agttccactccattcaacaaggaggagctgtcagccatcctgaagtttggtgcggaagag
cttttcaaagagcaggaaggagaggagcaggagcctcaggtttgt
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integrated database retrieval system
