Rhinichthys klamathensis goyatoka (western speckled dace): 130100147
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Entry
130100147 CDS
T09701
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X1
KO
K15623
protein SSXT
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130100147 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rkg03036
]
130100147 (ss18)
Chromosome and associated proteins [BR:
rkg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130100147 (ss18)
GBAF(ncBAF) complex
130100147 (ss18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
130100147
NCBI-ProteinID:
XP_056121604
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MSVAFAQHRQRAKGDITPAGIQKLLDENNQLIQCIMDFQSKGKTAECSHYQQMLHRNLVY
LATIADSNQNMQSLLPAPPTQNMPMNQSGATPQLPHGHSMPPEGPPAAHMQSQMNGQIPG
PNHMSIQGPGPNQTPSIPSGSMNMPASSHGSMGAYNHAVPSSQGLQSQGQMNMSQGQPMG
NYGPRPNMNMQPNQGPIMHQQAPSQQYNMPPAGGGGQHYQGQQNPMGMMGQGNHVMGQRP
MPPYRPPHQGPPQQYAGQEEYYTEQYSHGGQGAPEGNAQYGQQQEAYQQGPPQQQGYPPQ
QQYTGQQGYPGQQQAYGQSQGAPSQYPNYPQSQGQQYSAYRPPQPGPPQGQPQRPYAFDQ
GQYGNYQQ
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggctttcgcacagcaccggcagcgcgccaagggcgatataacgcctgccggg
atacaaaagttactggatgaaaacaatcagctgatccagtgcatcatggacttccagagt
aaagggaaaacggctgaatgttcacactaccaacagatgttacacagaaatctggtgtat
ctggccacaatagcagactctaaccagaacatgcagtctctgcttcccgcgccgcccact
cagaacatgcccatgaatcaaagtggcgcgactcctcagctgccccatggccacagtatg
ccccccgaggggccgcccgccgcacacatgcagagccagatgaacggacagataccaggt
ccgaaccacatgtccatacagggcccgggacccaaccagacgcccagcatacccagtggc
tccatgaacatgccggccagcagccatggctccatgggggcgtataaccacgcagtgccc
tcctcgcagggcttgcagtcacaggggcaaatgaacatgagccaggggcagcccatgggt
aattacggccctcggcccaacatgaacatgcagcccaatcaggggcccataatgcaccag
caagctccttcccaacagtacaacatgcctcctgctggtggaggtgggcagcattaccag
gggcagcagaaccccatgggcatgatgggacaaggcaatcacgtgatggggcagaggccc
atgcccccctacaggccgccacatcaaggacctcctcagcaatatgctggtcaagaggaa
tactacacggagcaatacagtcatggaggacagggagcaccagagggaaacgcacagtat
ggtcagcagcaagaggcgtatcagcagggtccgccgcagcagcagggttacccgccgcag
cagcagtacaccggacagcagggataccccggacaacagcaggcctatggtcagtctcag
ggcgctcccagtcagtacccaaactacccccagagccaagggcagcagtattcagcctac
agacccccacagcccggcccaccacagggacagccgcagcgcccctacgcgtttgaccag
gggcagtatggcaactaccagcagtag
DBGET
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