Rhinichthys klamathensis goyatoka (western speckled dace): 130100353
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Entry
130100353 CDS
T09701
Symbol
pkd1l2b
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rkg04040
]
130100353 (pkd1l2b)
04091 Lectins [BR:
rkg04091
]
130100353 (pkd1l2b)
Ion channels [BR:
rkg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
130100353 (pkd1l2b)
Lectins [BR:
rkg04091
]
C-Type lectins
Others
130100353 (pkd1l2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
Lectin_C
SUEL_Lectin
GPS
Motif
Other DBs
NCBI-GeneID:
130100353
NCBI-ProteinID:
XP_056121756
LinkDB
All DBs
Position
Unknown
AA seq
1899 aa
AA seq
DB search
MDGRLFTLLFLIISACGEAGPEGLSCPEHQQAFESSCYEFVALKSSFLSAQAWCERDGGH
LAFIQSDETQHFLQKHLKAEQDWWIGLVSTSINLALDTEDGLIWLDGTDVVYSNWLSEPR
LETGCGHINTHSGLHWMISSNCSQEYYFICEFELGRSLSCTDNTILRCGSDHVIEVEESF
YGRKTPHYCRTNTSSPRAALPQHCSWIDVRDLVAELCNGQQVCTAVADGSSSGEPCPDLG
SYLSVEYHCKSQASGVIVKRSADDGGEESFVKVIKLIFHCSNCINKPDKIYLKLENPNCD
KTNWYVEGDSKSKKKKEDSFKEDCLKNGKKVLKLQDDDDDTLEVKAKEIGSFKKDILVVV
ACQKGGTTSYGEFIIVYSLIEIDKNKLKEDVKKLLTLTNRADDTEEIKEDLLLDISALLE
DSEELQEPSDVQFYADVLKSIIKDEGKVNVNAQELAGSILEVLSESLTSFDLTPDNIIAL
TGTVKILLESASHILGAFNNDKESDINGYVVNVVDNVQSFLLINKLPDLEPDIIITPHVS
VYVNRLSPPNLQKEPFSVQNSLTSFKLPNLGSDIILPVDEPVDVKMAQFNIDPWIEGQPI
HSIVAGLSLSKTDGSVIPVANLTEEIEIFLPRLVDTAVNSSVLDLRNFSTSTINITTPNI
PLVLKLRPSEELTLVVLLGYQNYPTEENHVAKVTLPQQGDSQDQRYTWVLGPSDMAIDVG
IYFLLIRPVVPPGVKSVNASVTITSITAQCIFWEETRSNWSDYGCRVGPKTTAEVTQCLC
NHLTFFGNSFFVMPNTVDPSKSAELFSNFANNPVVVCFIGSIFLAYILTAAWARRKDLQD
KAKVKISVLEDNDPFAEYRYLLKISTGHRMGASTSSRVIVTLQGAEGECEPHHLTDPDKP
VFERGGVDLFLLTTAFPLGELQSIRLWHDNSGDHPAWYVNSVMVEDLQTEQKWHFLCSAW
LAVDIDDCTVERVFPVASEMDMKGFSNLFFMKTTTDFCDGHIWYSVVSRPPSSNFTRVQR
VSCCFSVLLCSMLTSIMFYGIPTDPTEQTMDMGQIKLTWSQVKIGIQSSFIVFPVNLLIV
GIFRHSRPRKKKTKKQKAHKQPEPPQMEKEILDETFSPHVENNLTVDFIINDIQRITYLF
GNAMRCPVLKTQQNPDQADLSTLLSELQNLIEQQHFIHKNETSSVFWAYSHHLSRQLENL
EGEVKLLGPSGFSRPGCYSQVLLQIQSMKKLLESLCSSRPLIEQRTRSLSPKKDSGSRKG
LPWWFVFVGWLLVAATSVISGYFTMLYGLKYGKDRSISWIITIAMSFTESLFFTQPIKVF
CLAIFFALVVKKISFEDAELVDSLSKKTTTCSDGLNGVRLAKRDCTHSFYEPPPSSDIEK
IKRNMVKQQKARALIMEILVFLGFLWMLLLVAYGQRDENGFHLTHHIRQSFSNGISDSMN
HNDVFSWANSVLLSNLFGKYPGFITDGNSKLVGGARLRQVRVTRDSCMIAKSMRHAVPHC
NAPYSWENEDMGSYGPGWEEFNFVNGSEDTVTAWQYQSQSTLKAVPVWGMIALYRGGGYV
MDLGSDRQNASRKLQYLFDSTWLDVYTRAVFAEFTVYNANVNLFCIVTLILESTAVGAFQ
FRSVVQSVRLYQSTGGFQSFLMASQVFYFLFIVYYMFLQGKLLKRQKWAYFKNKWNLLDL
AIIILSWSSLSVFIKRTVQGDQDIEYYQKDKDQFPSFHDTAVIDATLGYLMAFLVLLACV
KLWHLLRLNPKLHLITSSLQRAWNEMSSFIVVIFIILLAYSLSCNLIFGWKLYSYKTFPD
AFKTIFSLQFGLFNYDEVMESDPVLGALIISTCVIFITFVILTLFVSVILEAFSEEQQDH
QPSEEEEIVDLILVKILSLFGIKSKKKEAEEIHHGDKNT
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atggatggcagactctttactttgctatttctgatcatctcagcatgtggcgaagcagga
cctgaaggtctttcctgccccgagcaccaacaggctttcgagagctcctgctatgagttt
gtggccctgaagagcagtttcctcagcgctcaggcttggtgtgagcgggacggtgggcac
ctggccttcatccagagtgatgaaacccagcactttctccagaaacacctgaaggcggag
caggactggtggataggactagtgtctacctccatcaacctcgctctggacacggaagat
ggcttgatctggttagatggtacagatgtggtctactcaaactggctcagtgagccgagg
ctggaaactggctgtggacacatcaacacacactctgggttacactggatgatctcaagt
aactgtagtcaggaatattacttcatttgtgagtttgaactgggacgctctctgtcgtgt
acggacaacactatcctgcggtgtggctcagatcatgtgatcgaggttgaggagagtttc
tacggaagaaagacgccacattactgcaggaccaacacgtcaagccctcgcgcagcttta
cctcagcactgcagctggatcgatgtgcgggatttagtcgcagagctgtgtaatggacag
caggtttgcacggctgtggcagacggttcatcttctggagagccgtgtcctgacctagga
agttacctgtctgtggaataccactgcaaaagccaagcctctggtgttattgtgaaaaga
tctgcagatgatggtggagaagaatcgtttgttaaggtgatcaaattgatttttcactgc
tcaaattgtataaataagcctgataaaatctatttgaagctagaaaaccctaactgtgat
aaaactaactggtatgtggaaggagacagtaagtcaaagaaaaagaaggaagacagtttt
aaggaagactgcttaaaaaatggcaaaaaggtgctgaaactacaagacgatgatgatgac
acattggaagttaaagctaaagagattggatctttcaagaaggacatcctcgttgtggtg
gcttgccaaaaaggtggaacaacttcttatggggagttcatcatagtctattccttaata
gagatagacaagaataagctcaaggaagacgtcaaaaaactattgactctaactaataga
gcagacgacacagaagagatcaaagaggatcttcttttagatataagtgcattgttagaa
gactctgaggaactccaggaaccctcagacgtacagttctatgctgatgttttgaagagc
atcattaaagatgagggcaaagtgaatgttaatgctcaggagcttgctggttccatacta
gaggttcttagtgaatccctcacatccttcgatctgactccagataacatcattgcacta
actggaacagtcaaaatcctccttgagtccgctagtcacattctcggtgccttcaataac
gacaaagagtctgacatcaatggttatgtggtcaatgtagtggacaatgtgcagtcattc
ctgctaataaataaattacctgatctggagcccgacatcatcatcactcctcatgtcagt
gtttacgtcaacaggttatctccacctaacctccagaaagagcctttcagtgtccagaac
agtctaaccagcttcaagcttccaaatctgggctctgatataatactgcctgtagatgag
ccagtggatgtgaaaatggcacaatttaacatcgatccatggattgaaggtcagcccatt
catagtattgtggctggtttgtccctttccaaaacagacggctctgtcattccagtggca
aacctcactgaggagattgagatctttttaccaaggctggtggacacagcagtgaacagc
tcagttctagatctgagaaacttcagcacttcgacgatcaatataaccacccccaacatt
cctctggtcttaaagttacgtccctctgaagagttaacactagtggtactgctgggttat
cagaactatcctactgaggaaaaccacgtggccaaagttacacttcctcaacaaggagat
tcacaagaccaaaggtacacatgggtactgggccccagtgacatggcaatagacgtgggc
atttacttcctcctgatacgacctgttgttcctccgggcgtaaaatctgttaatgcatca
gtaacaattacatccataactgctcagtgcattttctgggaagaaaccagatccaactgg
agtgactatggctgtagggttggccctaaaacgactgcagaagttactcagtgcctgtgt
aaccatttaaccttttttgggaacagtttctttgtcatgcccaatacggtagatccatcc
aagtctgctgagcttttttccaactttgcgaataacccagtggtggtgtgctttatcggg
tctatcttcttagcttacatcctgaccgcggcatgggcgcgcaggaaggacctgcaggac
aaagccaaggtgaagatttctgtgctagaggacaatgatcccttcgctgagtaccgatac
ttgctgaagatcagcactggacatcgcatgggagcctccacttcatcgcgggttatagtg
actctacaaggtgcagagggagaatgtgagccccatcacctcactgaccccgataagcca
gtgtttgaaaggggaggagtggacctgttcttactgaccactgccttcccattgggagag
ttgcagagcatcagactgtggcatgacaactcaggagatcatcctgcttggtatgttaac
tcagtgatggttgaagacctgcagactgagcagaagtggcacttcttgtgcagcgcgtgg
ctggctgttgatatagatgattgtactgttgaaagagtgtttcccgttgcatcagagatg
gacatgaaaggcttcagcaatttattcttcatgaagacaacaacagacttctgtgatggc
cacatctggtactctgtggtcagtcgaccccccagcagtaacttcacccgtgtgcagcgt
gtctcgtgctgtttctcagtgctgctctgctccatgttgaccagtatcatgttctacggg
attcccacagaccccactgagcagacaatggatatgggccagattaaactgacctggagt
caggtgaagattggcatccagagctccttcattgtgttccccgtgaacctactaattgtg
ggaatcttcagacactcacgtccccgaaaaaagaagacaaagaaacaaaaggctcataag
cagcctgagcctcctcagatggagaaagagatcctggatgagaccttctctccacatgtt
gagaacaatttaacagtagatttcattatcaatgacatacagagaatcacatacttgttt
ggaaatgccatgagatgccccgtcctgaaaacacagcagaaccctgatcaagcagacctc
agcactttactgtcagagctgcagaacctcatcgaacaacagcatttcatacacaaaaac
gaaacctcctccgttttctgggcctatagccatcatctttccagacaacttgaaaacttg
gagggagaagtgaagctgctggggccttcaggcttttctaggcctgggtgctacagccag
gttttactccagatccagagcatgaagaaactgctggaaagtctctgttcctccagaccc
ctcattgagcagcggacccgtagcttgagccccaaaaaagacagcggcagcaggaagggt
ctcccatggtggtttgtgtttgtgggttggcttcttgttgcagccacaagtgtgatatca
ggatactttaccatgttgtatggactgaaatatggaaaggatcgctcgatcagttggata
atcaccattgcgatgtccttcactgagagcctcttctttacccagcccataaaagtgttt
tgtttggcaattttctttgcattggtggtgaagaaaatcagttttgaggatgcagaactt
gttgactctttaagtaagaaaacaaccacttgctcagatggcctcaatggagtgcgactt
gctaagagggattgtacacacagcttctatgagcctccaccttccagtgatattgaaaag
attaagagaaacatggtcaaacagcagaaagcacgggcgctcatcatggagattttagtt
tttctggggttcttgtggatgctgctcttggtggcatatggtcagcgagatgaaaatgga
tttcacctcacacaccacatccggcagagcttcagcaatggcatttcagacagtatgaac
cacaatgatgtgttctcctgggctaatagtgtacttcttagtaacctgtttggaaaatat
ccaggctttataacggatggaaactcaaaacttgttggcggtgctcgtcttcgtcaagtt
agggtgacgagagactcttgcatgattgctaagtccatgcgtcacgctgttccccactgc
aatgccccttactcttgggaaaatgaggacatgggctcttacggtccaggctgggaagag
tttaattttgtaaatggctctgaggacaccgtcacagcttggcagtaccaaagccagtcc
acgctcaaagcagtccccgtttggggtatgattgcactttatagaggaggaggctatgtt
atggacctcggttctgaccggcaaaacgcgagcaggaagcttcaatatctatttgactcc
acctggttggatgtgtacacaagggcggtttttgcagagtttacggtgtacaacgctaat
gtcaacctgttctgcattgtcacgctgatactggagagcactgcagtaggcgcatttcag
tttcgcagcgtggtgcagagtgtccgtctctaccagtccacaggtggctttcaatcgttt
ctcatggcgtctcaggtcttttacttcctcttcatcgtctactacatgtttttgcaggga
aagctgctgaagcggcagaaatgggcatatttcaaaaacaagtggaatctgttagacctg
gccatcatcattttaagttggagttcattatcagtgttcatcaagagaacagtgcaggga
gaccaagacattgaatactaccagaaagacaaagatcagtttcccagtttccacgacaca
gctgtcatagatgctacactgggatatctcatggctttcttggttctcctggcctgtgtg
aaactctggcatctgctgagactcaaccctaaactacacctcatcacctcctcactgcag
cgggcatggaacgaaatgtccagtttcattgtggttatcttcattatcctcttggcctat
tctctctcttgcaatctaatatttggatggaagctgtactcgtacaaaacgttcccagat
gcgttcaagacaatcttcagtttgcagtttggcttgttcaattatgatgaggtgatggaa
tctgatcccgtgctcggcgctctcatcatttccacttgtgtcatcttcattacgtttgtg
atactgaccctctttgtctcagtcatccttgaggcgttcagtgaagaacagcaggatcac
cagccttctgaggaagaggaaatcgtcgacctgattttggtgaagatcctcagtcttttt
gggatcaaatctaagaagaaagaagccgaagaaattcatcatggtgacaagaatacctag
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integrated database retrieval system
