Rhinichthys klamathensis goyatoka (western speckled dace): 130100384
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Entry
130100384 CDS
T09701
Symbol
nfat5b
Name
(RefSeq) nuclear factor of activated T-cells 5 isoform X1
KO
K17335
nuclear factor of activated T-cells 5
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130100384 (nfat5b)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
130100384 (nfat5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Exonuc_VII_L
CRWN_N
Motif
Other DBs
NCBI-GeneID:
130100384
NCBI-ProteinID:
XP_056121806
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MPSDFTTLFSADIDLDSPKSLYSKESVYDLLPKELQLPSSREQNAAAMSQKSGGEAGPPP
STALAADASSASSAMSTGSPRSAFPTSSTSASERVAGNDSSTPGDVSSRRKAEVLAAENK
LSGRVCGEKGGQQTQQQHQMTPSKRPVLNISPPPEDLFDDSNMSCQDELLLDSEQSNSIW
MENSVSNFSIVSSSSYNDNTEVPRKARKCTPRQKPGSKPVAAEEASMDVFDADSAKGPHF
VLSQLGPDSKTCSKASSDGPQASGLKGGILSCQYPQKSEGKELKIVVQPETQHRARYLTE
GSRGSVKDRTQQGFPTIKLEGVKESVVLQIFVANDAGRVKPHGFYQACRVTGRNTTACKE
VDIEGTTVIEVPLDLSSNMTLAVDCVGILKLRNADVEARIGVAGSKKKSTRARLVFRVNI
PRPDGSVLTLQTSSSPILCTQPAGVPEILKKSLHSCSVKGGNEVFIIGKNFLKGTKVIFQ
GNASADDKSWKAEADIDMEFFHQNHIIVKVPPYQNPAITSPVSVGIYVVTNAGRSHDVQP
FTYTPEPAVDSSVKKEVLPPVTPCCFEQIKVIDTALMTPVLPLVKREEATPMEVSSNPSA
FKTSEVINSAQQALDMSTEISTNNCKFSSPLAHQTREQDQSPNSVFSNKEPFSTIQEHNL
ASSGSFHVPNKSLLQQGVQPFLLEHRDSLGQERSGNSGGSVVGLSQIDDNPQQQLSLLPP
DEVAQLEQAVRQLQAKGFCNIQLQNENSMSKQRQHQLQQQQQQIQQQQQQIQQQQQQIQQ
QQQHIQQQEQQIHLQQQQHQQQQTLENLQHQIFQPQVQIHCSSEQPSSSQGIVVQNGNSL
FQQTPSQQQQQQQQQATLFQQATSFLQQQPSHSSPSLFHNPTAMTEAQSPQEALFHTQKT
SPNQDQVQASLFQSNLNVLSGSNMSVEAQSSATSMFLSQNAVPGQLTVNASQPQQLAFLT
SMQGTLEAPSVFQTPTQLSPIQQGTPMEQQQSPQHAQPGSIFQSISQSPSKLSPGQQQQA
GLLLGSLNSPVTQEQTSNMLFSGQVQIGSMNNSSLASPEQQNTSLPFSQAGMVTVRQQES
SKPMTFQDQTTMVVNPSSNKPIFQDQQPMQLAPSSGTGPSQSVNLFMAQSNMQGGMASQE
TLFAPQSDVTGIQTSTSSPVQQPGQLFQTTMGGDLNQPNRNQQPDLFLFEIQNECRQLMN
SPGSTLSDQIIAISQSGQRQQESEGQIQSLLGQSMPDPGNVPSTLTTSQNMEKIDDLLVS
LQEQGNNISHSY
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgatttcacaacgctcttcagcgcggatatcgacctcgattcgcccaagtcc
ctctactccaaagaatcagtatatgatcttctcccgaaagagctgcagctgccatcttct
agagagcagaacgcagccgctatgagtcaaaaaagtggtggagaggcgggacctcctccg
tcaacagctctcgccgcagatgcgtcgtccgcctcttctgctatgagcacgggaagtcct
cgcagtgcttttcccacctcttccacctcagcttcagaacgggtcgccgggaatgacagc
agcacgccaggagatgttagcagtcggaggaaagccgaggtgctggctgcggaaaacaag
ctttccggcagggtttgtggagaaaaaggtggccagcagacccagcagcaacaccagatg
acaccctccaaacggcctgtcctcaacatctcgcctccacccgaggacctgttcgatgac
agcaacatgtcctgccaggatgagctgcttctcgactcagagcagagtaacagcatctgg
atggaaaactcagtctctaacttcagcattgtgagctccagctcctacaatgacaacact
gaagtgccccgcaaggcccgcaagtgtaccccccgacagaagccggggtcaaagccggtc
gccgctgaagaggccagcatggatgtctttgatgcggacagtgccaaaggtccacacttt
gtgctctcacaacttggcccagacagcaagacctgttccaaagcaagctctgatggacct
caagcatctggtctcaaaggcgggatactgtcttgtcagtatcctcagaaaagtgaaggg
aaagaactgaagattgtggtgcagcctgagactcagcatagagcgcgttacctgaccgaa
ggcagtcgtgggtctgtgaaagaccgaacacagcagggtttccctactatcaagcttgag
ggtgtgaaggagtcagtggtcctgcagatttttgtggccaatgatgctggacgtgtgaaa
ccccatgggttctaccaggcttgcagagttacaggccggaacacaactgcctgtaaggaa
gtggacattgaaggcacaactgtcatcgaagtgcctctggatctcagcagcaacatgact
ctggctgtagattgtgtggggatcctgaagctcaggaatgccgatgtggaggcccgtatt
ggggtggctggatctaaaaagaagagtacccgtgccagactggtgtttcgagtcaacatc
ccacgccccgatggctctgtgctcacgttacagacctcgtcgtctcccatactgtgcacc
cagcctgcaggagtacctgagattctcaagaagagtttacacagttgttctgttaaaggg
gggaatgaagtctttattatcggaaaaaactttctcaaaggaaccaaggtcatatttcag
gggaatgcttcagcagatgataagtcctggaaggcagaggctgacattgacatggagttt
ttccatcagaatcacattattgtcaaagttcctccatatcagaatccagctatcacatct
cctgtatctgttggtatctatgttgttacaaatgccggacgatcccatgatgttcaacca
tttacgtacactccagagccagctgttgattcctctgtgaaaaaggaagtcttgcctcca
gtgacaccttgttgttttgaacaaataaaagtaatcgatactgccttgatgacgccggtt
ttgcctcttgttaaacgagaagaggccacaccaatggaggtctctagtaatccctcggcc
ttcaagacatctgaagtcatcaattcagcccagcaagccttagacatgagtactgagatc
tccaccaataactgcaagttttccagtccgctggcacaccaaacaagagaacaggatcaa
tctccgaattctgtcttttctaacaaggaaccattcagcaccatccaggaacataatctt
gcatccagcgggtctttccacgtgcctaataaatctcttctccagcaaggagttcagcca
ttcctcttggaacacagagacagtcttggacaggagagatcaggcaacagtggcggatca
gtggtgggtctgtcccagatagatgacaacccgcagcaacagctctcccttctacctcca
gatgaggtggcacaactagagcaggctgtgcggcagctgcaagcaaagggattctgcaac
atccaactccagaatgagaattcaatgtcaaagcaaagacaacatcaacttcaacagcag
cagcaacaaatccaacaacagcagcagcaaatccaacaacaacagcagcaaattcagcaa
cagcagcagcacatccagcaacaagagcagcaaatccatctgcagcagcagcaacaccag
caacagcaaactctggagaacctacaacatcagatttttcagccccaggttcagattcat
tgtagttcggagcaaccgagctcttcccagggaatcgtcgtgcagaatggaaattccctc
ttccagcaaaccccatcacaacagcagcagcagcagcagcagcaagcaaccttgtttcaa
caagcaactagctttcttcagcagcaacccagtcattcctcaccttccctgtttcacaat
ccgacggccatgactgaagcccaaagcccacaggaggctcttttccacacacagaagacc
tcacccaaccaggatcaggtccaggcttcccttttccaaagcaatctcaatgttctcagt
gggtccaacatgtctgtagaagctcagtcctctgcaaccagtatgtttctttcccagaat
gctgtaccaggtcaacttaccgttaatgccagtcagccacagcaactggctttcctcact
tctatgcaggggactctcgaggccccatctgtatttcagactccaacccaactgtccccc
atccagcaaggcactccgatggagcagcagcagtcaccacagcatgcccaacctggctcc
attttccagagtatctcccaatcaccaagcaaactgtctcctggtcagcaacagcaggct
ggtctacttcttgggtccttaaattctccagtaacacaagagcaaacttcaaatatgtta
ttcagtggacaagttcagattggatcgatgaacaacagcagcctagcttctccagaacaa
cagaacacttcccttcccttctctcaggccggcatggttacagtcaggcagcaggagtca
tctaaacccatgacatttcaggatcagactactatggtggtcaacccgtcctcgaataag
ccaattttccaagaccagcaaccaatgcagttggcaccaagttctggtacaggcccttcg
cagtctgtaaacctcttcatggcccagtccaacatgcaaggggggatggcttctcaagaa
accctttttgcaccacagagtgatgtaaccggaattcaaaccagcacttcctctccagta
caacagcctggtcaactctttcagactacaatgggtggagacctcaaccagcccaaccgg
aatcagcagcccgacctcttcctttttgagatccagaatgagtgccgtcagctaatgaac
agcccaggatctacactatctgatcagatcattgccatcagtcagtctgggcagagacag
caagagagtgaggggcaaatccagtctttacttggccagtctatgccagaccctggaaat
gtgccgagcaccttgacaacctctcagaacatggagaagattgacgatcttctggtgagc
cttcaggagcaaggcaataacatttcccactcctactag
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