Rhinichthys klamathensis goyatoka (western speckled dace): 130100395
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Entry
130100395 CDS
T09701
Symbol
stat1a
Name
(RefSeq) signal transducer and activator of transcription 1a
KO
K11220
signal transducer and activator of transcription 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04217
Necroptosis
rkg04620
Toll-like receptor signaling pathway
rkg04621
NOD-like receptor signaling pathway
rkg04625
C-type lectin receptor signaling pathway
rkg05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
130100395 (stat1a)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130100395 (stat1a)
04621 NOD-like receptor signaling pathway
130100395 (stat1a)
04625 C-type lectin receptor signaling pathway
130100395 (stat1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130100395 (stat1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130100395 (stat1a)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
130100395 (stat1a)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
STAT_alpha
STAT_int
STAT_bind
STAT_linker
SH2
STAT1_TAZ2bind
Int_N
SecM
COX5A
Motif
Other DBs
NCBI-GeneID:
130100395
NCBI-ProteinID:
XP_056121828
LinkDB
All DBs
Position
Unknown
AA seq
748 aa
AA seq
DB search
MSQWMELQQLDSKFLEQVDQLYDDNFPMAIRQYLSSWIESHDWEHVANVENESLATVRFH
DLLTQLDHQHSRFAMEKDFLNQHNIRKIKRNLQNLFQDDPVSMAMIISRNLSEERKILSA
AQMSENRTESTQNDMIVEKHREMDGRVKDIKNKVQDTEQIIKNLEDLQDEYDFKSKTLQS
REELNGTISAEDLNRERLTIRAMFMKLHNTRESVIGQMSEVSNLMDPVIFELISSELADW
RRRQQMACIGGLSNVCLDQLQNWFTSIAESLLQLRQQLKKLLELEQKFTYDKDPITLSKN
TLEDKIMSNLKTLITNSLVVERQPCMPTQLQRPLVLKTGVLFTLKLRLLIKLQEFNHTVR
VKVHFDKDIVEKRKGFRMFNILGTAMKVMNMEESNGMAAEFRHLQLKEKKVTGNRTSEGP
LIVTEELHSIVFEAELCWSGLVMNFEATSLPIVVISNVSQLPSGWASIMWYNMLNSEPKN
LSFFVTPSSATWGNLAEVLSWQFSSITKRGLNQEQLSMLGTKLLGPKAVMDPEAQIPWNR
FCKSGSEKNFTFWLWIEAILDLIKRHLLSLWDDGCIMGFVTKDRTKALLYDKAPGTFLLR
FSESNRDGAITFSWIEHDSNEEPQIRSVEPYTKRELSAVSLPDIIRNYRVMAADNVPENP
LRFLHPNLPKDDAFKKYYSKPTEKQEPMDVDKKSDEGYISTTLISISEMKPQEYNDTLMP
MSPEVFDQLKLEVNRYDIRLEPSDFSLS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtggatggagcttcaacaacttgattcaaagtttttggaacaggtcgaccaa
ctgtatgatgacaactttccaatggccatccggcagtacctcagcagctggatagaaagc
cacgactgggagcatgttgctaatgtggagaacgagtccctggctaccgtgaggtttcat
gatcttttgacccagttagatcaccaacacagccgcttcgcgatggagaaagacttcctg
aaccagcacaacatccgcaagatcaagaggaacttgcagaacctcttccaagacgatccc
gtttccatggctatgatcatcagtaggaaccttagcgaagaaaggaagattctgtccgct
gcccaaatgtcagagaatcgaaccgagagcacccaaaacgacatgatcgtggagaaacat
cgagaaatggacggaagggtgaaagacataaagaacaaagtacaggacaccgagcagatc
atcaaaaatctggaagatctgcaagacgaatacgacttcaagagcaaaactcttcaaagc
agagaggaactcaacgggaccatttcagcggaagacttgaatcgggagagactcaccatc
cgcgccatgtttatgaaactccacaacacaagagagagtgtgattggtcagatgtcagag
gtgtcgaatctcatggatccggtgatctttgagctgatctcatcagaactggccgattgg
aggcgccgacaacagatggcttgcatcggtgggctgagcaatgtctgcttggaccagctg
caaaactggtttacctctatcgcagaatctctgcttcagctcaggcagcagctcaagaaa
cttctggagctggagcagaagttcacatacgataaagatcccatcaccctcagcaaaaac
accctggaggacaagatcatgtcaaacctcaaaactttaatcacaaactccttggtagtc
gagagacagccatgcatgccgacccaactgcaaagacctttggtgctgaagacgggtgtt
ctgttcactctcaaattacggctgctcataaaacttcaggaattcaaccacactgttcga
gtgaaagtccattttgataaggatatcgttgagaaacggaaagggtttcggatgttcaac
atcttgggaacagccatgaaggtgatgaatatggaggaatccaatgggatggctgcagaa
tttcgtcatctgcaactgaaagagaagaaagttaccggaaacagaactagtgagggtcct
ctgatcgtcacggaagaacttcactccatcgtctttgaggctgagctttgctggtctgga
ctggtcatgaactttgaggctacatctctgcccatagtcgtgatctccaatgtcagtcag
ctacccagtggatgggcctccatcatgtggtacaacatgctgaactctgaaccaaagaac
ctttcgttcttcgtcactccttcttcagccacttggggtaatctagcggaggtgctgagc
tggcagttctcctccatcaccaaaagaggtcttaatcaagaacagttgagcatgctggga
actaaactgctaggtcctaaagcggtgatggatcctgaagctcagattccttggaataga
ttctgtaagtctggcagtgagaagaacttcaccttctggttgtggattgaagccattttg
gatcttataaagagacacctgctgagtctgtgggatgatgggtgtataatggggtttgtg
accaaggaccgtactaaagctctgctgtatgacaaagctcccgggacgtttctgttgcgc
ttcagtgagagcaaccgcgacggagcaatcacgttcagctggatcgaacatgactcaaac
gaagagccgcagattcgctctgtggagccctacacgaagagggaactctctgccgtctcg
cttcccgacattattcgaaactatcgcgtgatggccgccgacaacgtcccagaaaaccct
ctgcggttccttcatcccaatttacccaaagacgacgccttcaaaaaatactattccaaa
cctaccgagaagcaagaaccaatggatgtcgacaagaagtcagacgagggatacatcagc
accactctcatctccatctctgaaatgaaaccgcaagaatataatgacacgctcatgcca
atgtcacctgaggtattcgaccagctgaagctggaggtgaaccgatacgatatccgactg
gagccgtcagacttcagcctttcttaa
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