Rhinichthys klamathensis goyatoka (western speckled dace): 130100501
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Entry
130100501 CDS
T09701
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130100501 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rkg01002
]
130100501 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rkg04121
]
130100501 (usp16)
Enzymes [BR:
rkg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130100501 (usp16)
Peptidases and inhibitors [BR:
rkg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130100501 (usp16)
Ubiquitin system [BR:
rkg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130100501 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
130100501
NCBI-ProteinID:
XP_056121947
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MGKKKVKDRSPSTETPGVSCTHIRKGIDNSLLKKTGLNLSSCQDCEPNKPVEDQISEDEI
DRESPAVWLCLKCGHRGCGRFENQHAVKHYETPRSEPHCLVLSLDVWSVWCYICDEEVQY
SSTGQLAQLITNIRKQVPTDPGKSTSNKKCKKEEKPAEQTPHEEKENQKSNSKHDDSPKR
QKAAAAAGSPGVVCVRGLSNLGNTCFFNAVVQNLSQTWFLRELLSQISDEKSCFTITPSS
ELEPLQIQLERPGSLTLAMCQVLNEVQDTKKGVVTPKELFTQVCKKAPRFKGFQQQDSQE
LLRYLLDGMRAEEVKRVNSGILGALKNSGKSLEAEQTKKVTKEYERNGAPKNFVDRVFGG
EMSSTVMCKECRTVSLVTEMFLDLSLPVADEAYRKKNQKKVAQYRSSVSDYGDQDSTSSL
ANGNEDMPTGTGSKYQQKKAKKQAKKQAKNQRRQQKLGSKVPLEPLSNQSTASSTDPADG
SGHSVAENGCADVEPVKNSQEHLILEKPSAQSLNEDEDDEEPEQEHATAGKNRFTALSED
QTSEDVSVEGDKVEEVNEIEEEDGADQLCAEEDQLVEELNIMSLKTASEGEMENGDDASV
DVKEYTVVNQDPELAFHALTSREAPEKKECSVESCLYQFTEVEHLTENNRLMCFTCTKRQ
PGHKASDGGKKAVYRDALKQMLISHPPAVLTLHLKRFQQVGYSVCKVNRHVHFPQILDLA
PFCSLNCKGVKEGETQVLYSLYGIVEHSGTMRSGHYTAYVKSRPSTHNYVENGSAAGCNA
EASKGSWFHISDSSVHPVPEAKVQSSQAYLLFYEKIS
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaagaaggtgaaagacagaagtcctagcactgagactccaggggtttcctgc
actcacatccgcaaaggaatagataacagcttactgaagaaaaccggtctaaatctgagc
tcgtgccaagactgtgagccgaacaagcctgttgaagaccagatctcggaggatgaaatt
gacagagaaagtccagctgtgtggctgtgcctgaaatgcggccacagaggctgcgggaga
tttgagaatcagcatgcagtcaagcactacgagacgcctcgatccgagccacactgttta
gtgctcagcctggacgtctggagcgtctggtgttacatctgtgatgaagaagttcagtat
tccagcacgggacagctggcacagctgatcacaaacataagaaaacaagtgccgacggat
cctggcaagagcacctccaacaaaaaatgtaagaaggaagagaaacctgcagagcaaaca
ccacatgaagagaaagagaaccagaagagcaactccaaacatgatgacagtcccaaaaga
cagaaggcagcggcggcagcaggaagccctggtgtcgtgtgtgtcaggggtctcagtaat
ctgggcaacacgtgtttcttcaatgcagtcgtgcagaatttatcacagacgtggtttttg
cgagaactgctgagccagatttcagatgagaagagctgcttcaccatcactccatcatct
gagctggaacctcttcagatccagctggaaagacccgggtcgctcacgctggctatgtgt
caggtactgaatgaagtccaggataccaagaaaggtgttgtgacccctaaagaactcttc
actcaagtgtgtaaaaaagctccacgctttaaaggctttcagcagcaggacagtcaggag
ctgctgcggtaccttctggacggcatgcgggcggaagaagtgaaaagagtaaactctgga
attctgggggctttgaaaaactctggcaaaagcttagaggccgagcaaacgaagaaggtt
actaaagagtatgagagaaacggtgcacccaagaactttgtggaccgagtgtttggtgga
gagatgagcagcacggtgatgtgcaaagagtgcaggactgtgtctctggtgacggagatg
tttctggatctgtctcttcctgtagctgatgaggcctacaggaagaagaatcagaagaaa
gttgctcagtatcgcagcagcgtcagtgactatggagatcaagacagcacatcatctctg
gccaatgggaatgaagacatgcctacaggaacaggaagcaagtaccagcagaagaaagcc
aagaagcaggccaagaaacaagccaagaatcagagacggcagcagaaactgggcagtaaa
gtccctctggaacctctgtccaatcagagcacagctagcagcaccgatccagcggacggc
tccggtcacagtgtggcagaaaatggctgtgctgatgtggaaccagttaaaaacagccag
gagcatttgatccttgagaaaccttctgcacaatcactaaatgaggatgaagatgatgag
gaacccgagcaagagcatgccactgctggcaagaaccgcttcactgccttatccgaagac
cagacctctgaagatgtgtctgtagagggagacaaagtggaagaggtgaatgaaattgag
gaggaggacggtgctgaccagctttgtgctgaagaggatcagttagtcgaagaactgaat
attatgtcactaaaaacagcttcagaaggtgaaatggagaatggagatgatgcctcagtt
gacgttaaagaatacactgtggtgaatcaggaccctgagctcgcctttcacgcactgacc
agcagggaggcgccagagaagaaggagtgttcggtggagtcctgcctgtatcagtttact
gaggtggaacatctcacagagaacaacagactgatgtgttttacctgtacaaaacgccag
cctggacataaagcctcagacggtggtaagaaagctgtttacagagatgcactgaagcag
atgctgatctctcatcctccagcagtgctcacacttcacctgaagagattccagcaggtt
ggatacagcgtttgtaaggtgaacagacatgtgcactttcctcagatcctggatctagct
cctttctgctctttaaactgcaagggtgtgaaggagggagaaacgcaagtgctgtatagt
ctttatggcatagtggagcacagcggcaccatgcggtccggacactacacggcctacgtc
aaatcacgaccctccacgcacaattacgtagaaaacgggtcggctgctggttgtaacgct
gaggccagtaaaggctcatggttccacatcagcgacagcagcgtccatcccgttccggag
gccaaagtgcagagttcccaagcctacctcctgttctacgagaagatctcataa
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integrated database retrieval system
