Rhinichthys klamathensis goyatoka (western speckled dace): 130100526
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Entry
130100526 CDS
T09701
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130100526
04121 Ubiquitin system [BR:
rkg04121
]
130100526
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130100526
Ubiquitin system [BR:
rkg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130100526
BRITE hierarchy
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
130100526
NCBI-ProteinID:
XP_056121974
LinkDB
All DBs
Position
Unknown
AA seq
547 aa
AA seq
DB search
MDPFLQKKQTCTPQQANALTESVLQMLIYDMRPLSMVDGAGFQQMIAQFNPDYILPSRTH
FTHLMEQKYSTTFLKVKQILKEVNSSITLTSDVWTSRATEAYLGVSCHFITKDWQMKTLN
LATLPLEERHTAANIMIWMEEVIEKFDILPSKIKAIVHDNGSNMVAAARLLEEKHGWSSV
RCAGHTLQLIINSALKEPSINKATGAARNLVEHFRRSELANSKFKKKQQQMNTTEHKLIQ
DISTRWNSTYYMVSRLLEQRWPVTATLSDPEVTPRGKHYFDLKPEQWVLLEELVQGLGPF
ECATVFLSGQEYATASCLPQLVKGLQRSIQHTQFETSSGKACQAIAGKGISERWENLNTV
FAERGNPLVLAAAIDPRFRKLKFISLEDGTRVQSTVEVLAIKEAKAKTGLHDDPEELQQK
KRGHIPGGKSALDNLLQSDTDSLSEEEEETQEDKKIQMVRREVQMFFTEPPIAKKEDPLS
WWSENEGRFPTLSNIARSLLCIPTTSTPAERIFSPAGNIFSQKRASLTRDHVDMLTFLNM
NKLNDIA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggacccctttctgcaaaagaagcagacgtgcaccccacaacaggcgaatgccctcact
gagtcagtattgcagatgctgatctatgatatgaggccgctctccatggtcgatggtgct
gggtttcaacaaatgatagcccagttcaatccagactacatcctgccatccagaacccat
ttcacccacttgatggagcagaaatacagtacaacgtttctgaaggtaaagcagatccta
aaagaggtaaacagctccatcacactgacaagtgatgtttggaccagccgtgccacagag
gcatatcttggagtttcgtgtcatttcatcaccaaagactggcaaatgaagactttgaac
cttgccactctacccctggaggagagacatactgctgcgaacatcatgatatggatggaa
gaggtgatagagaaatttgacatcttgcctagcaaaattaaagcaatagtacatgataac
gggtctaacatggtggcggcagctcgactcctggaagaaaaacacggttggtcttcagtc
cgctgtgctggccacaccctccaacttatcatcaacagtgccctcaaagagcccagcatc
aacaaagctactggtgctgcaagaaacctagttgagcactttaggagaagtgagctggca
aattcaaaatttaagaagaagcagcagcaaatgaacaccacagagcacaagctgatccag
gacatcagtacgcgatggaatagtacctattacatggtatcaagactcctggagcagcgc
tggccagtcactgcaactctctcagaccctgaggtaacaccaagaggcaagcactacttt
gacctgaaaccagagcagtgggtactacttgaagagctggtgcaagggttagggcctttt
gaatgtgctacagttttcctcagtgggcaggagtatgctactgcttcatgtcttccacag
ctggtcaaagggctgcaacggtccatacagcatacccagtttgagacaagctcaggaaaa
gcctgtcaagccattgcaggaaaaggaataagtgagagatgggagaatcttaacactgtg
tttgcagagagaggcaacccacttgttcttgcagctgccatcgacccaagattcagaaag
ctgaagtttatctcacttgaagatggcacaagggtgcaaagtacagttgaagttcttgct
atcaaagaagcaaaggccaagactgggctacatgatgaccctgaggagctacagcagaag
aagaggggtcatatcccagggggaaagtcagcgctagataacctgcttcagtctgacact
gacagtctgagtgaggaagaggaggaaacccaggaggacaaaaaaatccaaatggtgagg
agggaagttcagatgttcttcacagagccaccaatagccaaaaaagaagaccctctcagc
tggtggagcgaaaatgaggggcgttttcccacactgtcaaacatagcaagatctcttctg
tgcattcctacaacatccacccctgcagagcgaatcttctcaccagcaggaaatatcttc
tcccagaagagagcaagtctcacacgagaccatgtggatatgctgactttccttaatatg
aataaactgaacgacatagcctga
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