KEGG   Rhinichthys klamathensis goyatoka (western speckled dace): 130100561
Entry
130100561         CDS       T09701                                 
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
  KO
K10875  DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rkg  Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rkg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    130100561 (rad54l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rkg03400]
    130100561 (rad54l)
DNA repair and recombination proteins [BR:rkg03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     130100561 (rad54l)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 Rad54_N SWI2_SNF2 Zn_ribbon_InsA
Other DBs
NCBI-GeneID: 130100561
NCBI-ProteinID: XP_056122019
LinkDB
Position
Unknown
AA seq 737 aa
MRRSLAPSQVAKRKQGPDSDDEDWEPDIASQSKRGCIEKYISPFRKPLTPLTNTPVCADG
NEHEDFIRKILSKPFKVPIQNYTGPLGLRALGLKRAGVRKALHDPFEDGALVLYEPPAIS
AHELIKADKEKLPVHVVVDPVLTKVLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGL
GKTLQCITLMWTLLKQSPDFKPEIDKVIVVSPSSLVRNWYNEVGKWLGGRVQPVAIDGGS
KEEIDRKLENFISQHGIRVPTPILIISYETFRLHTEVLHKGKVGLVICDEGHRLKNSDNQ
TYQALNSMNAQRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDA
DASDKDRAAGEEKLQQLISIVNRCLIRRTSDILSKYLPVKIEQVVCCNLTPLQKELYKLF
LKQSKPVESLQTGKITVSSLSSITSLKKLCNHPALIYEKCLAGEEGFDGALDLFPQKYST
KAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRTRRYLYVRLDGTM
SIKKRAKVVERFNTPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARV
WRDGQKKTCFIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELRELFSL
NEKTVSDTHDRFRCRRCVNNRQVRPPPDDSDCTSDLSNWQHCSDKRGLRDPVLQASWDAA
VSFVFHQRSHEDQRGVV
NT seq 2214 nt   +upstreamnt  +downstreamnt
atgaggagaagtttagcacccagtcaagtggccaaaaggaaacaagggccggattcagat
gatgaggactgggagcctgacatcgcgtcacagagtaagagagggtgtatagaaaaatac
atctctcccttcagaaaacccctgacgccgctcaccaacacacccgtctgcgcagatggc
aatgagcatgaagacttcattcgtaagatcttatcaaagccgtttaaagttcccattcaa
aattatacaggcccgttgggtctgcgggctctgggactgaagcgggccggtgtgaggaag
gccctacacgacccgtttgaagacggagcgctggttctgtacgagccgcctgccatcagc
gctcatgagctcatcaaagcagacaaggagaagttaccagtgcatgtggttgtagatcca
gtgctcactaaagtgcttcggccccatcaacgagagggtgtgaagttcctgtgggactgt
gtgaccggaaggcggattgaaaactcgtacggctgtattatggcggatgagatgggactg
ggaaagactctgcagtgcatcactctcatgtggactttacttaaacagagtcctgatttc
aaacctgagatcgacaaggtcatcgtagtgtccccttcaagcctcgtgcgaaactggtac
aatgaagtgggcaaatggctgggtggacgcgtgcagcctgtcgcgatcgatggcggatcc
aaagaggagatagatcgcaaacttgagaacttcatctcccagcatggcataagagtgcca
actccaattttaataatatcctatgaaacattccgcctccacactgaagtcctgcacaaa
ggcaaagttggactggttatctgtgacgagggtcacaggctgaaaaactcagacaatcag
acgtaccaggcgctgaactccatgaacgctcagaggagagtgctgatatctggaacgccc
attcagaacgacttactggaatatttcagtttggtgcacttcgtaaattctggtatcctt
ggcacagctcaggagtttaagaaacgatttgagattccaatcctaaagggtcgtgacgcg
gacgccagtgataaagacagagctgccggagaggagaaactccagcaactcatcagcatt
gtaaaccggtgtttgattcgaagaacttcagatattctttccaagtatctgcctgtgaag
attgaacaagttgtctgctgcaatcttactcctctccagaaagagctgtacaagttattc
ctgaagcagtccaaacctgtagagagtctgcagaccggcaagatcacggtgtcttccctg
tcctccatcacctcgcttaagaagctctgcaaccatcctgccttgatttatgagaagtgt
ctggcaggagaagagggttttgatggagcattggacctcttcccacaaaagtattcaact
aaagcagtagaaccacagctctcagggaagatgctggtactggattatatcctggcgatg
accagaacaacaacaagtgataaagtggttctggtctctaactacacacagactttggac
ctttttgaaaagctgtgtcgaacccgaagatacctttacgttagactggacgggacaatg
tccatcaagaagagagcaaaggttgtggagagattcaacaccccctctaatccagagttc
atcttcatgctgagtagcaaggctggcggctgtgggctgaatctgattggtgcaaatcgc
ctggtgatgttcgaccctgactggaatccagccaatgacgagcaggcgatggccagagtg
tggcgagatggacagaagaagacctgcttcatctacagactgctgtcgactggaacgata
gaggagaagatcttacagagacaggctcataagaaagctttgagtagttgtgtagtggat
gaggaacaagatgtggaaagacatttctctcttggagagctgcgagaactcttctcactc
aacgagaagacagtcagcgacacgcatgacaggtttcgctgtaggcgctgtgtaaacaat
cgtcaggtgcgtcctcctccagatgattcggactgcaccagcgatctgtccaactggcag
cactgttcagataaaagaggcctgagggacccggtgctgcaggcgtcctgggacgctgcc
gtctccttcgtctttcaccagcgctcgcatgaggaccagagaggagtcgtctga

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