Rhinichthys klamathensis goyatoka (western speckled dace): 130100621
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Entry
130100621 CDS
T09701
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04510
Focal adhesion
rkg04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130100621 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
130100621 (rapgef1b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
130100621
NCBI-ProteinID:
XP_056122109
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All DBs
Position
Unknown
AA seq
1201 aa
AA seq
DB search
MGNTSRRSQPLLEETEYFNSAPDTESQKSHLSSFTMKLMKFHSPKIKRTPSKKSKQLQPE
PAVKTPEKPVNKKVSRLEEQEKEVVSALRYFKTIVDKMSVDTKVLQMLPGSASKVLEAIL
PLMQVEARIQHSSAMSSCHNRVYQSLANLIRWSDQVMLEGIDLDDKDTVATVTTVIKGVL
DGVKELVKLTIEKHEQPSPTSPNKPALPVTKAESVCENPLTEREKAILSKTTPIVTPTDS
LTDMSEEEAPPKPPLPGLKLAEHRNRMQLCSDPVAGQRRATAMETPPALPPKKRQSASSP
TRVAVVAPMSRGSCGLNLPPGALRQQQEFDVDLLQRRFSGGSQSYGGDSPRLSPCNSMGK
LSKSDEQLSSLERDSGQCSRNTSCETLEGYDPDYDFLHQDLSVSDPLPFPTGTGSSLSPL
PECHGESQSLSPAQAPPTHPRFSAPVTNQASLEYWTPPLAPGQTNRVHPPALPQKKRRSA
PILSAYPLYERLPSHYDNLSEEEQPTPPFPLVTPASPLPQVNGGDELSQYTDADSPPPLP
EKKGKQILQYMQFVEDYSEPQPSVFYQTPQSESIYEQRRNKRFQEVYGFNDSYSSSDSVH
EPVPPPALPPKQRQLASYTSPSSSSSSSFSILPPPAGLLEEAEPALGLSLSVSNSFLSGH
ASLTTPVSQSSDPIGLTNAGRALDGGAGVSNGSLTSSLVSLAVCLPSESSLSDSLLTSAS
ESVDEGGEGEYVNLYSSTQANGDNTHRTDTSSCDDGLQDHTPHIPTSNSKEALSKDRPKE
PSHGQIDDVDELSLIDHNDIMDRITLKAENDDGPDVRAGSGDILLVHATETDRKDLVLYC
EAFLTTYRTFITPEDLIKKLHYRYTRFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTE
DILRQLMDLVFRLVCNGELSLARVLRKNILDKVEQKRLLRHVHTLKPLAARGVSARPGTL
HDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSI
IIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEE
YCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDFIEGKVNFSKRWQQF
NILDSMRRFQQVHYELKRNDDIVSFFNDFSDHLAEEALWELSLKIKPRNISRRRTEREEK
T
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacaccagtcggagatcccaacctcttctggaggagacggaatattttaatagt
gcaccagatacagaatcccagaagtctcacctctcctctttcacgatgaaattgatgaaa
tttcattccccgaagattaaaagaactccatctaagaaaagcaaacaactccagccagag
cctgcagtgaagactccagagaaacccgtcaacaagaaggtgagtcgactggaggaacag
gagaaggaggtggtgagcgctctgcgttacttcaagacgattgtggacaagatgagcgtc
gatacaaaagttctccagatgcttcctggttcagctagtaaagttttggaggccatattg
cctctgatgcaggtagaggctcggatacagcacagctcggcaatgtcctcctgtcataac
cgcgtctatcagagtttggcgaatctcattcgttggtccgaccaggtgatgctggagggc
atcgacctcgacgacaaggacaccgtggcaaccgtcaccacggtgatcaaaggcgtgctg
gatggtgtgaaggagctggtgaaactcacaatagagaaacatgagcaaccgtccccgacg
tcccccaacaaaccagcgcttcctgtgaccaaagctgagagtgtgtgtgaaaatcctcta
actgagcgagagaaggcgatcctgagtaagaccacgcccatcgtcacgcccactgacagc
ttgactgacatgtccgaggaagaggctccgcccaaacctcctttaccgggactcaaactg
gcagagcacaggaacaggatgcagttgtgctccgatcctgttgccgggcagcggagggcc
acggcgatggaaaccccgcccgctctgcctcccaagaagcgacagtcggcctcctccccc
acgcgtgttgccgtggtagcgccgatgagtcgaggatcatgtggtctcaacctgcctcct
ggagccctgagacagcagcaggagtttgatgtggatctcctccagaggcgtttctccggc
gggagccagtcgtacggtggggattcgccccgtctctctccctgtaacagtatgggaaag
ctcagcaagtccgacgagcagctctcttcactggagcgagacagtggacagtgctctcgc
aacactagctgtgaaacactagagggatacgatcctgattacgacttcctacatcaggat
ctgtccgtctccgacccgttaccgtttcccaccggcactggcagcagtctgagccctctc
ccagaatgccacggggagtctcagtcattaagccccgcccaggccccgcccacccacccg
cgtttcagtgctcccgtcaccaatcaggcttccctggagtactggactccgcccctcgca
cctggacagaccaatagggtgcatccacccgccctcccccagaagaagcgacgatccgca
cccatcttatcggcgtaccctctttacgagcgcctcccatcgcactacgataacctatca
gaagaggagcagcccacgccaccgttcccgctggtgacgccagcgtctccccttcctcag
gtcaacggcggagacgaactctcacagtacacagacgccgacagcccgccgccgctacca
gagaagaagggcaaacagattctgcagtacatgcagtttgtggaggattattcggaaccg
cagccgtccgtcttctaccagacgcctcagagcgagagtatttacgagcagcggaggaac
aagcgctttcaggaggtttacggcttcaacgactcctacagcagctcagactctgtgcat
gaacccgtcccaccgccagcgctgccacccaaacagagacaactggcctcctatacctct
ccttcttcatcctcctcttcctctttttcaattctccctcctcctgctgggcttctggag
gaggcggagcctgctcttggtctcagcctatcagtgtctaactccttcctcagtggccac
gcctctttgaccacgcctgtgtcgcagagttctgacccgattggcttgaccaatgccggc
agagctctagatggtggggctggtgtctctaacgggtccttgaccagctctctggtctct
ctggccgtctgtcttccttctgagtcttctctttctgactcgcttcttacctccgcgagt
gaaagtgttgatgaaggtggcgagggagagtatgtgaacctgtactcgtccacacaggct
aacggagacaacacacaccgcactgacacgtcttcatgtgatgatgggcttcaagaccac
acccctcacatacccacgtccaatagcaaggaagcattgtctaaggacaggccgaaagaa
cccagtcatggtcagatagatgatgttgatgaattatccctcattgatcataatgacatt
atggaccgcatcacgctcaaagcagagaatgatgatggtcctgatgtgagagccggttct
ggtgatatactgttggttcacgctacagaaacagaccgcaaagatttggtgttgtactgt
gaggcttttctcaccacctacagaaccttcataacacccgaagacctcattaaaaaactt
cactacagatacacacgcttctgtcacagtccagacaccttcaagaagcgtgtcagtaaa
aacacgttcttcgtgctggtgagagtcgtggacgaactctgtctggtggagttgaccgag
gacatcctgcggcagttgatggatctggtgtttcggctggtctgtaacggggaactgagt
ctggcgagggtcctgcgaaagaacatcctagataaagtggagcagaagaggctcctgagg
cacgtgcacacgctcaagcctctcgccgcgcggggcgtctctgccaggcccggcacgctg
cacgatttccgcagtcatgagatcgccgatcagctgacgttgctggacgcagaacttttc
tacaagatcgagattcctgaggtgctgctttgggcaaaggaacagaacgaagagaaaagt
ccaaatctgacccagtttacagagcactttaacaacatgagctactgggtgcgctctata
atcatccagcaagagaaagctcaggacagagagaaactgctgctcaaattcatcaaaatc
atgaagcacttgcggaaactgaataacttcaactcttatttggcgattctctcggcgctg
gactctgcaccaatcagacgcctggaatggcagaagcagacgtctgagggcttggaggag
tactgcactttgattgacagctcgtcatctttccgagcgtacagagcagctctagccgaa
gtggagccgccatgtattccctacctgggtttgatcctacaggacctgacgtttgttcac
ctcggaaacccggattttattgagggtaaagtgaatttctccaagcgctggcagcagttc
aacattctggacagcatgagacgcttccagcaagtacactacgagctgaaacgtaacgac
gacatcgtctcgttcttcaacgacttcagcgatcacctggcggaggaggcgttatgggaa
ctctcgctcaagatcaaaccacgaaacatctcgcggcgccggacagagcgcgaggagaag
acctag
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