Rhinichthys klamathensis goyatoka (western speckled dace): 130100774
Help
Entry
130100774 CDS
T09701
Symbol
dhx32b
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rkg03041
]
130100774 (dhx32b)
Enzymes [BR:
rkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130100774 (dhx32b)
Spliceosome [BR:
rkg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130100774 (dhx32b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Motif
Other DBs
NCBI-GeneID:
130100774
NCBI-ProteinID:
XP_056122348
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MEPSTDVEKLPETNETQDIDSDDLLELNQFDGLPFSSRYYKLLRERKGLPVWGAKCEFMD
SLINSQIVIVTGTAKTGQSTQIPQWCAEFCLSTQYQNGMVVCTQIHQQSTVELALRVADE
MDVNIGNEVGYSIPLQTCCSPDTVLRYCTDDVLLREMMSDPLLEQCGVVVIDQAQERTVS
TDLLLGLLKDVLLARPELRLVILTATHSAEKLLRHYGSVPQIRLEGPQPCEVVYGSGRGG
VKDYLCSALRLALEIHQNQNHGDIVTFLATEQEIECAHAILRREGVNLALSHGELVPVSL
CPAQGDSLSLLSEESKSRRVFLTCSPSEDLFWAVQSIRFVIDAGVQKRYVYNPRIRANSI
VIRPISKSQAESRKQLAGPTGKCFCLYQEDTSLPVESVPHILESDITSTVLFLKRMEIAG
LSHCDFIDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEFPLEPQMAKTLLASCEF
DCVSEVLTIAAMLTAPSSFLTPPVETRQKALLCHQRFQHAEGDHFTLINIFNAYRYAKEG
PYSSVEQWCEDHFLSLAALQTADAIRSELTEILKRIELPVSLPAFGSKNNSLNIKHALLA
GFFMQVARDIDGSGNYFMLTHKHVAQIHPLSGYGTEMNKKNLPEWVLYHEHTLSENNCIR
TISQISAHEFIQMAPQYFFYNLPPSESKDVLQHIIDHGSAAPSKGIRKSQTPSSPASEEQ
PHERCTIQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggagccatcaacagatgtggaaaaactacccgaaaccaacgaaactcaagatattgat
tcggatgatctgctggagttaaatcagttcgacgggctccctttttcttcaagatattac
aaactattaagagaaagaaaaggtctgccggtgtggggagcgaaatgcgagtttatggac
agtttgatcaacagtcagattgtgatagttactggcacagctaaaacaggacaaagcact
cagatccctcagtggtgtgcagagttttgcctgtctacgcagtatcagaatggcatggta
gtgtgcactcagattcaccaacagagcacggtggaactggccctccgtgtggccgacgag
atggacgtgaacatcggcaatgaggttggatacagcatcccacttcagacctgctgctcc
cctgacactgtactgaggtactgcacagatgatgtgctgctccgggaaatgatgtcggac
cccctcttggagcagtgtggtgtggtggtcattgatcaggcccaggaacgcaccgtcagc
acagacctgctcctcgggctgctcaaagacgtgctcctcgcacggccagagctcagactg
gtcatcctcactgccactcactccgctgagaaactgctacgacactatggaagcgttcct
cagatccggctggaagggccacagccgtgcgaggtggtgtatgggagtgggagaggaggt
gtgaaggattacctctgctctgctcttagactggcgctggagatacatcagaatcaaaac
catggagacattgtgacatttctggcaactgagcaagagattgaatgtgcccatgccatt
ttgcggcgagagggtgtcaatcttgcattgtctcatggcgagctggtgcccgtgtctctg
tgccctgcgcaaggagacagtctctcactgctctctgaggagagcaagagtaggagagtc
ttcctcacctgcagccccagtgaagacttattctgggccgttcagagcattcgctttgtg
attgatgctggagtgcaaaaaagatatgtttacaatcctagaatcagagccaactccatt
gttattcgaccaatcagcaagagccaagctgagagccgaaaacaacttgcaggcccaaca
ggcaagtgtttctgtttgtatcaagaggacacgtcacttcctgttgagagcgtccctcac
attcttgagtctgacatcacttccactgtgctcttcctaaagcgcatggaaattgctggc
ctgagccactgtgactttattgacagaccagatccagaaggcctcatgcaagctttagag
gaactcgactatcttgctgctttggatgatgacgggaatctatctgagattggaattatc
atgtcagagtttcctcttgagccacagatggctaagactttgcttgcgtcttgcgaattc
gactgtgtgagtgaagtgctgaccatcgctgccatgctaacagctccgagcagtttcctt
acacccccagtggaaacgagacagaaggccttgctgtgtcatcagaggttccagcatgca
gaaggagaccacttcacccttattaacatatttaatgcttacagatatgctaaggaaggg
ccatactctagtgtggaacagtggtgtgaagaccatttccttagtctggctgctcttcag
acagcagatgcgatacgctctgagctaacagaaatactgaaacggatagagctgccagtg
tccttacccgcctttggctctaaaaacaacagcttgaacatcaaacatgcattactagct
ggcttcttcatgcaggtggcaagggacattgacgggtcagggaattacttcatgctaacc
cataaacatgtggctcagatccacccactgtctggctacggaaccgagatgaacaagaag
aatctgccagaatgggttctgtaccatgagcacacgctatcagagaacaactgtatcaga
accatctctcagatctccgcacatgagttcattcagatggcaccacagtacttcttctat
aacctgccacctagtgagagtaaagacgtactgcagcacattatagatcatggttcagct
gccccatctaaaggcataagaaaatcccagacccccagcagccctgccagtgaggagcag
ccccatgagcgctgtaccatacagtga
DBGET
integrated database retrieval system
