Rhinichthys klamathensis goyatoka (western speckled dace): 130100859
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Entry
130100859 CDS
T09701
Symbol
slc1a6
Name
(RefSeq) excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130100859 (slc1a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rkg02000
]
130100859 (slc1a6)
Transporters [BR:
rkg02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
130100859 (slc1a6)
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Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
130100859
NCBI-ProteinID:
XP_056122470
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MNEKPPNSTSLFLSEDSEKPQRAEEGLHRLCRVLQKQMSGSRRKMGCITRDSVKTFLRRN
AFVIFTVAAVALGVVLGFALRPHNLSIREVKYFSFPGELLMRMLQMLVLPLIVSSLVTGI
SSLDSKASGKMGIRAIVYYMVTTLIAVFIGIVMVIIIRPGKGSRDRPVASSGSIEPVQAA
DAFLDLIRNMFPPNLVEACFKQYKTLYKKTVLTKNVTIMVNATDSINSTDLSQVSNFSTI
LQTIQETVEEVVPVSGSSNGVNALGLVVFSMCFGLVIGNMKQQGQALRDFFDCLNEAIMR
LVAIIIWYAPVGILFLIAGKIVEMKDLAQVGGQLGMYTVSVIVGLLIHGLFVLPLLFFVV
TKKNPFTFIAGLLQALITALGTSSSSATLPITFRCLEENNHVDKRVTRFVLPVGATINMD
GTALYEAVAAIFIAQVNDMDLNFGQILTISITATAASIGAAGIPQAGLVTMVIVLTSVGL
PTEDITLIIAVDWFLDRLRTTTNVLGDSFGAGIVEHLSRQELQNQDVEINNSVIEENEKP
YQLICQENDSLKHRNSETPM
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaagcctccaaacagcaccagcctgtttctgagtgaagattctgagaagcca
cagcgtgctgaggaggggctccaccgtctgtgtcgagtattacagaagcagatgtcagga
agtaggcgaaagatgggctgcatcacacgagacagcgtcaagacattcctgcgaaggaat
gcgtttgtaatcttcacagtggctgctgtggctttaggggtggtgctgggttttgccttg
agacctcataacctgtccatcagggaggtgaagtatttctctttccctggagagctgctt
atgaggatgcttcaaatgcttgttctacccctcatcgtctccagccttgtcacaggaatt
tcctctttggacagcaaggcttctgggaagatgggaatccgggccattgtctactacatg
gtgactacgcttatagcagttttcatcggtattgtcatggtgattattatcaggccgggt
aaaggcagcagggataggccagtggcctctagtggcagcattgagccagtgcaggccgct
gatgcgtttctggacctgataagaaatatgtttccaccaaatttagttgaagcctgcttt
aaacagtacaaaacactatacaagaaaactgtgctgacaaaaaatgtcaccatcatggtc
aatgcgacagacagcatcaactctacagatctcagccaagtatccaacttcagcacaatc
ctgcagaccatccaggagacggtggaagaggtggttcctgtctcaggttcctcaaatggg
gtgaatgccttggggttggtggtcttctccatgtgcttcggattagtgattggaaacatg
aaacagcagggccaggctctccgggacttctttgactgcctgaacgaagctataatgcgc
ttggtggccatcattatctggtacgctccggtgggtatcctcttcctgattgcagggaag
attgtagagatgaaagaccttgctcaggtgggcggacaattagggatgtacacggtatct
gtcattgtcgggctactcatccacggcctgttcgttctgcctctgctcttctttgtggtg
accaagaagaaccctttcacctttattgctgggctgctacaggctctgatcaccgctcta
ggcacctcatccagctctgccaccctgcccatcactttccgttgtcttgaagaaaacaac
catgtggacaaacgagtgacacgttttgtgctaccagttggagccacaatcaatatggat
ggcacagctctgtatgaggcagtggcggccatttttattgcacaggtcaatgacatggac
ctgaactttggccagatcctcaccatcagtattacggcgactgccgctagcatcggagca
gcaggcatccctcaggctgggctggttactatggtgatagtattgacatcggtgggactg
cccacagaggacattacactgatcatcgcagtggactggttcctggatcgactcaggacc
accaccaatgtgctgggagattcatttggtgctgggattgttgagcatctgtcacgacag
gaacttcagaaccaagatgtagaaatcaacaactctgtgatcgaggagaatgaaaagcca
tatcagctgatttgtcaagagaacgactctctcaagcatcgcaacagtgaaacccccatg
taa
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