Rhinichthys klamathensis goyatoka (western speckled dace): 130100903
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Entry
130100903 CDS
T09701
Symbol
pparg
Name
(RefSeq) peroxisome proliferator-activated receptor gamma isoform X1
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03320
PPAR signaling pathway
rkg04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130100903 (pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
130100903 (pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rkg03000
]
130100903 (pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rkg03310
]
130100903 (pparg)
Transcription factors [BR:
rkg03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
130100903 (pparg)
Nuclear receptors [BR:
rkg03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
130100903 (pparg)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PPARgamma_N
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
130100903
NCBI-ProteinID:
XP_056122531
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MLHRRFNIRKTSFTSDMVDTQTFAWPVGFGLSALELEELDDSSHSLDMKPFSTLDYTSIS
GVEYEPSPQNEPPHMMDLTHMYSYRTQENFRTQENIRTQETFRTQESIYRSHESSFTAEE
SGYRAHQSQNLIKLEPESPPQFAENSLSFSKAHEDPSASALNIECRVCGDKASGFHYGVH
ACEGCKGFFRRTIRLKLVYDHCDLHCRIHKKSRNKCQYCRFQKCLMVGMSHNAIRFGRMP
QAEKEKLLAEFSSDVDHMHPESADLRALARLLYESYLKYFPLTKAKARAILSGKTSDNAP
FVIHDMKSLMEGEHMINSRQMPMQEHRRSDMGVIHEVELRFFHSCQSRSAEAVSEVTEFA
KSIPGFVNLDLNDQVTLLKYGVIEVLIIMMAPLMNKDGTLISYGQIFMTREFVKSLRKPF
CEMMEPKFEFSVKFNMLELDDSDMALFLAVIILSGDRPGLLNVKPIEDLQETVLHSLELQ
LKTNHPDSLQLFAKVLQKMTDLRQLVTDHVQLITLMKETEVDWCLHPLLQEIIRDLY
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacagacgcttcaatattagaaaaacatctttcacttcggatatggtggacacg
cagacgttcgcctggcccgtgggattcggcctgagcgctctggaactggaggagctcgac
gacagctcgcactcgctggacatgaagcctttctccacgctggactacaccagcatctcc
ggcgtcgagtacgagccgagtccgcagaacgagccgccacacatgatggatctgacacac
atgtacagttacaggactcaggagaacttcaggactcaggagaacatcaggacacaggag
accttcaggacacaggagagcatctacagatctcacgagagcagcttcaccgcggaggag
agcggatacagagcacaccagtctcagaacttgatcaagcttgaacccgagtctcctcct
cagtttgcagagaacagcctgtcgttctccaaagctcacgaagacccgtcggcctcggcg
ctgaacatcgagtgtcgtgtgtgtggagacaaggcctcgggcttccattacggggtgcac
gcctgcgagggatgcaagggcttcttccgcaggacgatccggctgaagctggtgtacgat
cactgcgacctgcactgccgcatccacaagaagagccgcaacaagtgccagtactgccgc
ttccagaagtgcctgatggtgggcatgtcacacaacgccattcgtttcggccgaatgcct
caggcggagaaggagaagctgctggccgagttctccagtgacgtggaccacatgcacccg
gagtctgcggatctcagagcgctggccagactcctgtacgagtcctatctcaagtacttc
cccctgaccaaagccaaggccagagccattctctcagggaagaccagcgacaacgcccct
ttcgtgatccacgacatgaagtccctgatggaaggcgagcacatgatcaactcccggcag
atgccgatgcaggagcaccggagatccgacatgggagtcattcacgaagtggagctgcgt
ttcttccacagctgccagtcgagatcggccgaagccgtcagcgaagtcaccgagttcgcc
aagagcatcccgggcttcgtgaacctggacctgaacgaccaggtgacgctcctgaagtac
ggcgtgatcgaggtgctcatcatcatgatggcgccgctcatgaacaaggacggcacgctc
atctcctacggccagatcttcatgacccgcgagttcgtcaagagcttgcgcaaacccttc
tgcgagatgatggagcccaagttcgagttctccgtcaagttcaacatgctggagttggac
gacagcgacatggcgctgttcctcgccgtcatcatcctgagcggagaccgacccggcctg
ctgaacgtcaagcccatcgaggaccttcaggagacggtcctgcactctctggagctgcag
ctgaagaccaaccatcccgactccctgcagctgttcgccaaagtcctgcagaagatgacg
gacctgcgccagctggtgacggaccacgtgcagctcatcacactcatgaaggagaccgag
gtggactggtgccttcacccgctcctgcaggagatcatcagggacctgtactag
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