Rhinichthys klamathensis goyatoka (western speckled dace): 130100919
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Entry
130100919 CDS
T09701
Symbol
cldn1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg03272
Virion - Hepatitis viruses
rkg04382
Cornified envelope formation
rkg04514
Cell adhesion molecule (CAM) interaction
rkg04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
130100919 (cldn1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130100919 (cldn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130100919 (cldn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130100919 (cldn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rkg03037
]
130100919 (cldn1)
04147 Exosome [BR:
rkg04147
]
130100919 (cldn1)
Cilium and associated proteins [BR:
rkg03037
]
Other cilia and associated proteins
Stereociliary proteins
130100919 (cldn1)
Exosome [BR:
rkg04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
130100919 (cldn1)
Exosomal proteins of colorectal cancer cells
130100919 (cldn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
OppC_N
DUF2776
DUF6479
DUF7702
DUF1218
DUF7027
Motif
Other DBs
NCBI-GeneID:
130100919
NCBI-ProteinID:
XP_056122557
LinkDB
All DBs
Position
Unknown
AA seq
210 aa
AA seq
DB search
MANAGLQLLGYVLASLGLLGLIASTAMAEWKISSYAGDNIITAQAMYEGLWQSCVSQSTG
QLQCKVYDSLLQIPGEVQGTRALMILAAFLCGIGLLIAAVGMKCTTCLSGNTEQKNKVAV
AGGVLFVIAGVCALIATSWYGENIRRKFFDPFTPTNSRYEFGKALYVGWGASALTVIGGS
MLCCNCPSKAAGKTYPPPTRAAARPGAERV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgcgggtctgcagctcctcgggtatgtcctggcctctctgggtctcctgggt
ctcatcgcttccacagccatggccgagtggaagatctcctcctacgccggggacaacatc
atcacagcccaggccatgtacgaggggctctggcagtcctgcgtgtcccagagcacaggc
cagctccagtgtaaagtctacgactccctgctgcagatcccaggggaagttcagggcact
cgtgctctcatgatcctcgccgccttcctgtgtggcatcggcctgttgatcgccgccgtc
gggatgaagtgcacaacctgcctgtccggcaacaccgagcagaagaacaaggtggccgtg
gccggaggcgtcctcttcgtcatcgcaggggtgtgtgctcttattgccacaagctggtat
ggagaaaacataagacgcaagttcttcgatccgttcactccgactaattcgaggtatgag
ttcggcaaggctctgtacgtgggctggggagcgtcggcgctgactgtcatcggtggaagc
atgctgtgctgtaactgtcccagcaaagccgctgggaaaacctacccgcctcccacacgc
gcagcagcacggccaggagcggagcgcgtgtga
DBGET
integrated database retrieval system
