Rhinichthys klamathensis goyatoka (western speckled dace): 130101123
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Entry
130101123 CDS
T09701
Symbol
colgalt2a
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
rkg
Rhinichthys klamathensis goyatoka (western speckled dace)
Pathway
rkg00310
Lysine degradation
rkg00514
Other types of O-glycan biosynthesis
rkg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rkg00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130101123 (colgalt2a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
130101123 (colgalt2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rkg01003
]
130101123 (colgalt2a)
Enzymes [BR:
rkg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
130101123 (colgalt2a)
Glycosyltransferases [BR:
rkg01003
]
O-Glycan biosynthesis
O-linked Gal type
130101123 (colgalt2a)
BRITE hierarchy
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Aminotran_4
Motif
Other DBs
NCBI-GeneID:
130101123
NCBI-ProteinID:
XP_056122676
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MADLRASGKLLFGLLLLQTWPCFIHTLIDLEPALQETSLLKPKVVIAVLARNAEHSLSYF
LGCIERLDYPKDRISIWAATDHNIDNTTAMLHEWLSGVELLYHSVQLQTMEEEKSYYVDE
LGPKHWTESRFTHVMKLRQAALTSARAQWADYILFADSDNLLTNTQVLNHLIAENRTLVA
PMLESRTLYSNFWCGMTSQGYYRRTPHYVPIRNWKRTGCHPVPMIHSTMLIDLRRSASAA
LAFYPLHHYYLWALDDVMAFAFSARQAGVQMFLCNKEHYGYLPLPLEMKQTLEEEVESFS
HTVTEALIDFKMETSHYLQIASKPKDTMAFNQVYLINLKRREDRRDRMLRSLEALGIDVT
LTDAVDGKTLNSTQLKALGIEMLPGYKDPYSDRVLTKGEIGCFLSHYSIWKKVVELQQQQ
VLVLEDDVRFETNFKSRLNTIMKDVKQSGLQWDLIYVGRKRLQIKHPERWVEGVKNLVSP
DYSYWTLGYALSLQGAKTLLEAQPLSKMLPVDEFLPVMFNKHPKEEYMSHFKPRDLKAFS
VEPLLLFPTHYTGESGYFSDTETSTIWNDETVDTDWDRHHVRGDRSRGDKTPTPVSESSP
REEL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctaagagcatctggaaagcttctgtttggactgttactgttacagacatgg
ccctgctttattcatacactcattgacctggagcctgctctgcaagagacatctctactc
aaacccaaagtagtcattgcggttttggcccgtaacgctgaacacagtctttcctatttt
ctgggatgtattgagagactggattatcccaaggaccgcatctctatatgggccgctacc
gatcacaatattgacaacaccactgcaatgctgcacgaatggctctccggagtagagctt
ttgtatcattcagtacaactgcagaccatggaggaggagaagagttattatgtggatgag
ctgggccccaagcactggacggagtctcggttcacgcatgtgatgaagctgaggcaggct
gcgctcacatcagccagggcacagtgggcagactatattctgtttgcagacagtgataac
ctgctgacgaatacacaagtgctgaatcatctgattgctgagaatcggacgctggtcgct
ccaatgctagagtcaaggacactctattcaaacttttggtgtggtatgacctcacagggg
tattataggcgaacaccacattatgtacccattcggaactggaagcgtaccggttgccac
ccagttcccatgattcactccacgatgctgatagacctgcggcgcagtgctagtgcggcc
ctggccttttaccctctgcaccattactatctttgggccctggatgatgtcatggctttt
gcattttctgcaagacaagcaggtgtgcagatgttcttatgtaacaaagagcattatggg
tacctgccactgcctttggagatgaagcagactctggaggaggaggtggagagcttcagc
cacactgtcaccgaggcactaattgacttcaaaatggaaacttcacattacctgcagatt
gcttccaaacccaaagacaccatggcattcaatcaggtctacttgatcaatcttaaacgc
cgggaggatcgcagagaccgtatgctgcgctcgttggaggcgctgggcatagatgtcacc
ctcaccgatgcggtggatggcaaaaccctgaattcaactcagctaaaagctttaggaatt
gagatgcttcccggatataaagatccttactctgatcgtgtgctaactaagggtgaaatc
ggttgcttccttagccattacagcatctggaaaaaggtggtggagctccagcaacagcag
gtgctcgtactggaggatgatgtcaggtttgaaaccaactttaagagccgcctcaacacc
atcatgaaggatgtaaaacaatcaggcctccagtgggacttaatttacgtggggcgtaaa
cgattgcaaattaagcatccagagcgctgggtggagggagtgaagaacctggtgagccca
gattactcttattggacactaggctatgccctttcactgcagggggcaaagacgcttctg
gaagcccagcctctcagcaagatgctgcccgtggacgagtttctgcctgttatgtttaac
aagcaccccaaggaggaatacatgtctcatttcaaaccgagagacttgaaggctttctct
gtggaacccctgctgctctttcccacacactacactggggagtcggggtatttcagcgac
acagagacctccaccatctggaatgacgagacggtggacactgactgggaccgtcatcac
gtccgtggagaccgcagtcgaggcgataagactcccacgccagtctctgagagcagcccg
agagaggaactatga
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integrated database retrieval system
